RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 CCDC85BQ15834 202 aaPredicted RBP17.06■□□□□ 0.32
CTSD-202ENST00000367196 ZNF618Q5T7W0 954 aa17.06■□□□□ 0.32
CTSD-202ENST00000367196 CENPQQ7L2Z9 268 aaPredicted RBP17.06■□□□□ 0.32
CTSD-202ENST00000367196 CYFIP1Q7L576 1253 aa17.06■□□□□ 0.32
CTSD-202ENST00000367196 ATP6V0A1Q93050 837 aa17.06■□□□□ 0.32
CTSD-202ENST00000367196 PSTPIP2Q9H939 334 aa17.06■□□□□ 0.32
CTSD-202ENST00000367196 SPDYE3A6NKU9 549 aa17.05■□□□□ 0.32
CTSD-202ENST00000367196 MEIS2O14770 477 aa17.05■□□□□ 0.32
CTSD-202ENST00000367196 LGR5O75473 907 aa17.05■□□□□ 0.32
CTSD-202ENST00000367196 PLEKHA8P1O95397 391 aa17.05■□□□□ 0.32
CTSD-202ENST00000367196 SMIM10L2AP0DMW4 78 aa17.05■□□□□ 0.32
CTSD-202ENST00000367196 SMIM10L2BP0DMW5 78 aa17.05■□□□□ 0.32
CTSD-202ENST00000367196 POU3F3P20264 500 aaPredicted RBP17.05■□□□□ 0.32
CTSD-202ENST00000367196 THPOP40225 353 aa17.05■□□□□ 0.32
CTSD-202ENST00000367196 TRIM71Q2Q1W2 868 aaKnown RBP17.05■□□□□ 0.32
CTSD-202ENST00000367196 USP17L6PQ6QN14 398 aa17.05■□□□□ 0.32
CTSD-202ENST00000367196 SGMS1Q86VZ5 419 aa17.05■□□□□ 0.32
CTSD-202ENST00000367196 TEX2Q8IWB9 1127 aa17.05■□□□□ 0.32
CTSD-202ENST00000367196 MICALL1Q8N3F8 863 aa17.05■□□□□ 0.32
CTSD-202ENST00000367196 SRBD1Q8N5C6 995 aaKnown RBP17.05■□□□□ 0.32
CTSD-202ENST00000367196 GPKOWQ92917 476 aaPredicted RBP eCLIP17.05■□□□□ 0.32
CTSD-202ENST00000367196 GPRASP2Q96D09 838 aa17.05■□□□□ 0.32
CTSD-202ENST00000367196 ZFP91Q96JP5 570 aaPredicted RBP17.05■□□□□ 0.32
CTSD-202ENST00000367196 GPR20Q99678 358 aa17.05■□□□□ 0.32
CTSD-202ENST00000367196 RBM28Q9NW13 759 aaKnown RBP17.05■□□□□ 0.32
CTSD-202ENST00000367196 RTEL1Q9NZ71 1219 aa17.05■□□□□ 0.32
CTSD-202ENST00000367196 PTPRSQ13332 1948 aa17.04■□□□□ 0.32
CTSD-202ENST00000367196 RSPH10B2B2RC85 870 aa17.04■□□□□ 0.32
CTSD-202ENST00000367196 RSPH10BP0C881 870 aa17.04■□□□□ 0.32
CTSD-202ENST00000367196 HOXC8P31273 242 aa17.04■□□□□ 0.32
CTSD-202ENST00000367196 TAP1Q03518 808 aa17.04■□□□□ 0.32
CTSD-202ENST00000367196 AAK1Q2M2I8 961 aa17.04■□□□□ 0.32
CTSD-202ENST00000367196 TMTC3Q6ZXV5 915 aa17.04■□□□□ 0.32
CTSD-202ENST00000367196 MICU3Q86XE3 530 aa17.04■□□□□ 0.32
CTSD-202ENST00000367196 FANCBQ8NB91 859 aa17.04■□□□□ 0.32
CTSD-202ENST00000367196 ARNTL2Q8WYA1 636 aa17.04■□□□□ 0.32
CTSD-202ENST00000367196 ASB2Q96Q27 587 aa17.04■□□□□ 0.32
CTSD-202ENST00000367196 SPTBN5Q9NRC6 3674 aaKnown RBP17.03■□□□□ 0.32
CTSD-202ENST00000367196 DOCK5Q9H7D0 1870 aa17.03■□□□□ 0.32
CTSD-202ENST00000367196 KAT6AQ92794 2004 aa17.03■□□□□ 0.32
CTSD-202ENST00000367196 GJB5O95377 273 aa17.03■□□□□ 0.32
CTSD-202ENST00000367196 RXRAP19793 462 aa17.03■□□□□ 0.32
CTSD-202ENST00000367196 ZNF200P98182 395 aaPredicted RBP17.03■□□□□ 0.32
CTSD-202ENST00000367196 SEMA3FQ13275 785 aa17.03■□□□□ 0.32
CTSD-202ENST00000367196 KRT32Q14532 448 aa17.03■□□□□ 0.32
CTSD-202ENST00000367196 GPNMBQ14956 572 aa17.03■□□□□ 0.32
CTSD-202ENST00000367196 RAD9AQ99638 391 aa17.03■□□□□ 0.32
CTSD-202ENST00000367196 CHD7Q9P2D1 2997 aa17.02■□□□□ 0.32
CTSD-202ENST00000367196 hCG_1984214I3L0E3 225 aa17.02■□□□□ 0.32
CTSD-202ENST00000367196 MAFGO15525 162 aa17.02■□□□□ 0.32
CTSD-202ENST00000367196 AMHP03971 560 aa17.02■□□□□ 0.32
CTSD-202ENST00000367196 SKIV2LQ15477 1246 aaKnown RBP17.02■□□□□ 0.32
CTSD-202ENST00000367196 TRAF7Q6Q0C0 670 aa17.02■□□□□ 0.32
CTSD-202ENST00000367196 HEATR3Q7Z4Q2 680 aa17.02■□□□□ 0.32
CTSD-202ENST00000367196 ZNF713Q8N859 430 aaPredicted RBP17.02■□□□□ 0.32
CTSD-202ENST00000367196 WNT8BQ93098 351 aa17.02■□□□□ 0.32
CTSD-202ENST00000367196 NEK1Q96PY6 1258 aa17.02■□□□□ 0.32
CTSD-202ENST00000367196 RNPEPQ9H4A4 650 aa17.02■□□□□ 0.32
CTSD-202ENST00000367196 CERS4Q9HA82 394 aa17.02■□□□□ 0.32
CTSD-202ENST00000367196 PRDM6Q9NQX0 595 aa17.02■□□□□ 0.32
CTSD-202ENST00000367196 MTCH2Q9Y6C9 303 aa17.02■□□□□ 0.32
CTSD-202ENST00000367196 MICAL3Q7RTP6 2002 aa17.02■□□□□ 0.32
CTSD-202ENST00000367196 NRCAMQ92823 1304 aa17.01■□□□□ 0.31
CTSD-202ENST00000367196 TREHO43280 583 aa17.01■□□□□ 0.31
CTSD-202ENST00000367196 HMGB1P09429 215 aaKnown RBP17.01■□□□□ 0.31
CTSD-202ENST00000367196 DEFB103AP81534 67 aa17.01■□□□□ 0.31
CTSD-202ENST00000367196 SP4Q02446 784 aa17.01■□□□□ 0.31
CTSD-202ENST00000367196 MTMR1Q13613 665 aa17.01■□□□□ 0.31
CTSD-202ENST00000367196 UTP14CQ5TAP6 766 aaKnown RBP17.01■□□□□ 0.31
CTSD-202ENST00000367196 PPP1R18Q6NYC8 613 aa17.01■□□□□ 0.31
CTSD-202ENST00000367196 CMTR1Q8N1G2 835 aaKnown RBP17.01■□□□□ 0.31
CTSD-202ENST00000367196 SEPT8Q92599 483 aa17.01■□□□□ 0.31
CTSD-202ENST00000367196 LRRC2Q9BYS8 371 aa17.01■□□□□ 0.31
CTSD-202ENST00000367196 LMCD1Q9NZU5 365 aa17.01■□□□□ 0.31
CTSD-202ENST00000367196 PRRC2BQ5JSZ5 2229 aaKnown RBP17.01■□□□□ 0.31
CTSD-202ENST00000367196 COL4A4P53420 1690 aaPredicted RBP17.01■□□□□ 0.31
CTSD-202ENST00000367196 TNFRSF10AO00220 468 aa17■□□□□ 0.31
CTSD-202ENST00000367196 CDC45O75419 566 aa17■□□□□ 0.31
CTSD-202ENST00000367196 RPLP2P05387 115 aaKnown RBP17■□□□□ 0.31
CTSD-202ENST00000367196 TCF7P36402 384 aaPredicted RBP17■□□□□ 0.31
CTSD-202ENST00000367196 ARHGAP4P98171 946 aa17■□□□□ 0.31
CTSD-202ENST00000367196 HIC1Q14526 733 aa17■□□□□ 0.31
CTSD-202ENST00000367196 MBTPS1Q14703 1052 aa17■□□□□ 0.31
CTSD-202ENST00000367196 PLEKHG4Q58EX7 1191 aa17■□□□□ 0.31
CTSD-202ENST00000367196 TAF2Q6P1X5 1199 aa17■□□□□ 0.31
CTSD-202ENST00000367196 APOA5Q6Q788 366 aa17■□□□□ 0.31
CTSD-202ENST00000367196 DHX32Q7L7V1 743 aaKnown RBP17■□□□□ 0.31
CTSD-202ENST00000367196 CCDC82Q8N4S0 544 aa17■□□□□ 0.31
CTSD-202ENST00000367196 APBB2Q92870 758 aa17■□□□□ 0.31
CTSD-202ENST00000367196 TNPO1Q92973 898 aaKnown RBP17■□□□□ 0.31
CTSD-202ENST00000367196 TGS1Q96RS0 853 aaKnown RBP17■□□□□ 0.31
CTSD-202ENST00000367196 GLT8D2Q9H1C3 349 aa17■□□□□ 0.31
CTSD-202ENST00000367196 COG5Q9UP83 839 aa17■□□□□ 0.31
CTSD-202ENST00000367196 INSL6Q9Y581 213 aa17■□□□□ 0.31
CTSD-202ENST00000367196 CNTNAP5Q8WYK1 1306 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 SIP14410 1827 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 ZBTB43O43298 467 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 FOSP01100 380 aaPredicted RBP16.99■□□□□ 0.31
CTSD-202ENST00000367196 KCNA2P16389 499 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 RCAN1P53805 252 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms