RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 SUGCTQ9HAC7 445 aa12.48□□□□□ -0.41
RD3-201ENST00000367002 LRRC53A6NM62 1247 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 TRIM37O94972 964 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 KCNJ6P48051 423 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 MFAP3P55082 362 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 ADCY1Q08828 1119 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 PAXIP1Q6ZW49 1069 aaPredicted RBP12.47□□□□□ -0.41
RD3-201ENST00000367002 MCF2L2Q86YR7 1114 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 NIM1KQ8IY84 436 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 NLGN1Q8N2Q7 840 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 STK32BQ9NY57 414 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 TUBE1Q9UJT0 475 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 CLRN2A0PK11 232 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 SFI1A8K8P3 1242 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 POLD1P28340 1107 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 BFSP1Q12934 665 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 PDCLQ13371 301 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 ZKSCAN8Q15776 578 aaPredicted RBP12.47□□□□□ -0.41
RD3-201ENST00000367002 C10orf76Q5T2E6 689 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 RNF10Q8N5U6 811 aaKnown RBP12.47□□□□□ -0.41
RD3-201ENST00000367002 FMO2Q99518 471 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 ANO3Q9BYT9 981 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 MLXIPQ9HAP2 919 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 TRPC6Q9Y210 931 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 PVALEFA0A1B0GWK0 134 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 POC1B-GALNT4F8VUJ3 575 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 SUN1O94901 812 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 SNX16P57768 344 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 ANTXR2P58335 489 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 GSPT2Q8IYD1 628 aaKnown RBP12.47□□□□□ -0.41
RD3-201ENST00000367002 ENGASEQ8NFI3 743 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 TCP11Q8WWU5 503 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 VTI1AQ96AJ9 217 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 CHP1Q99653 195 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 UBE2TQ9NPD8 197 aaPredicted RBP12.47□□□□□ -0.41
RD3-201ENST00000367002 CLEC11AQ9Y240 323 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 SSX2IPQ9Y2D8 614 aa12.47□□□□□ -0.41
RD3-201ENST00000367002 USP17L5A8MUK1 530 aa12.46□□□□□ -0.41
RD3-201ENST00000367002 PALMO75781 387 aa12.46□□□□□ -0.41
RD3-201ENST00000367002 BPIFB4P59827 614 aa12.46□□□□□ -0.41
RD3-201ENST00000367002 SNX1Q13596 522 aa12.46□□□□□ -0.41
RD3-201ENST00000367002 CYP4F22Q6NT55 531 aa12.46□□□□□ -0.41
RD3-201ENST00000367002 TRIM6Q9C030 488 aaPredicted RBP12.46□□□□□ -0.41
RD3-201ENST00000367002 POLD4Q9HCU8 107 aa12.46□□□□□ -0.41
RD3-201ENST00000367002 PTPRMP28827 1452 aa12.46□□□□□ -0.41
RD3-201ENST00000367002 APBA3O96018 575 aa12.46□□□□□ -0.41
RD3-201ENST00000367002 TMOD1P28289 359 aa12.46□□□□□ -0.41
RD3-201ENST00000367002 MAPK4P31152 587 aa12.46□□□□□ -0.41
RD3-201ENST00000367002 MXI1P50539 228 aa12.46□□□□□ -0.41
RD3-201ENST00000367002 GRAPQ13588 217 aa12.46□□□□□ -0.41
RD3-201ENST00000367002 HADHQ16836 314 aaKnown RBP12.46□□□□□ -0.41
RD3-201ENST00000367002 SGO2Q562F6 1265 aa12.46□□□□□ -0.41
RD3-201ENST00000367002 GRAPLQ8TC17 118 aaPredicted RBP12.46□□□□□ -0.41
RD3-201ENST00000367002 PI4KBQ9UBF8 816 aa12.46□□□□□ -0.41
RD3-201ENST00000367002 CD2APQ9Y5K6 639 aa12.46□□□□□ -0.41
RD3-201ENST00000367002 STK10O94804 968 aaKnown RBP12.46□□□□□ -0.42
RD3-201ENST00000367002 HOXA13P31271 388 aaPredicted RBP12.46□□□□□ -0.42
RD3-201ENST00000367002 RFX5P48382 616 aaPredicted RBP12.46□□□□□ -0.42
RD3-201ENST00000367002 CDC37Q16543 378 aaPredicted RBP12.46□□□□□ -0.42
RD3-201ENST00000367002 FAM83BQ5T0W9 1011 aa12.46□□□□□ -0.42
RD3-201ENST00000367002 SCYL2Q6P3W7 929 aa12.46□□□□□ -0.42
RD3-201ENST00000367002 NEK9Q8TD19 979 aa12.46□□□□□ -0.42
RD3-201ENST00000367002 USP17L15C9J2P7 530 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 USP17L13C9JLJ4 530 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 USP17L11C9JVI0 530 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 USP17L18D6R9N7 530 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 USP17L22D6RA61 530 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 USP17L17D6RBQ6 530 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 USP17L19D6RCP7 530 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 USP17L20D6RJB6 530 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 USP17L24Q0WX57 530 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 TNFAIP1Q13829 316 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 CC2D2BQ6DHV5 1058 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 USP17L6PQ6QN14 398 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 PPP4R3CPQ6ZMV5 832 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 SRBD1Q8N5C6 995 aaKnown RBP12.45□□□□□ -0.42
RD3-201ENST00000367002 RNF34Q969K3 372 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 CROCC2H7BZ55 1655 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 ESYT3A0FGR9 886 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 PABPN1LA6NDY0 278 aaKnown RBP12.45□□□□□ -0.42
RD3-201ENST00000367002 H0YCG3 227 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 RNF8O76064 485 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 FGGP02679 453 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 HOXA7P31268 230 aaPredicted RBP12.45□□□□□ -0.42
RD3-201ENST00000367002 PHBP35232 272 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 GGCXP38435 758 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 FXR1P51114 621 aaKnown RBP eCLIP12.45□□□□□ -0.42
RD3-201ENST00000367002 VSNL1P62760 191 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 GFPT1Q06210 699 aaPredicted RBP12.45□□□□□ -0.42
RD3-201ENST00000367002 BBOF1Q8ND07 529 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 CEP95Q96GE4 821 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 DHX36Q9H2U1 1008 aaKnown RBP12.45□□□□□ -0.42
RD3-201ENST00000367002 SENP2Q9HC62 589 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 ANAPC4Q9UJX5 808 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 PNPLA7Q6ZV29 1317 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 A0A1B0GTH6 734 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 E9PMD0 336 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 PPEF1O14829 653 aaPredicted RBP12.45□□□□□ -0.42
RD3-201ENST00000367002 HSPA6P17066 643 aa12.45□□□□□ -0.42
RD3-201ENST00000367002 POLR2BP30876 1174 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms