RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 HOMER1Q86YM7 354 aa10.45□□□□□ -0.74
CNIH4-202ENST00000366857 GUF1Q8N442 669 aaKnown RBP10.45□□□□□ -0.74
CNIH4-202ENST00000366857 PROCA1Q8NCQ7 364 aaPredicted RBP10.45□□□□□ -0.74
CNIH4-202ENST00000366857 FBXW7Q969H0 707 aa10.45□□□□□ -0.74
CNIH4-202ENST00000366857 TGFB1I1O43294 461 aa10.44□□□□□ -0.74
CNIH4-202ENST00000366857 HOXD8P13378 290 aaPredicted RBP10.44□□□□□ -0.74
CNIH4-202ENST00000366857 STAT3P40763 770 aa10.44□□□□□ -0.74
CNIH4-202ENST00000366857 KCNMA1Q12791 1236 aa10.44□□□□□ -0.74
CNIH4-202ENST00000366857 C1orf220Q5T0J3 134 aa10.44□□□□□ -0.74
CNIH4-202ENST00000366857 SMARCE1Q969G3 411 aa10.44□□□□□ -0.74
CNIH4-202ENST00000366857 PURBQ96QR8 312 aaKnown RBP10.44□□□□□ -0.74
CNIH4-202ENST00000366857 GPR88Q9GZN0 384 aa10.44□□□□□ -0.74
CNIH4-202ENST00000366857 DBR1Q9UK59 544 aaKnown RBP10.44□□□□□ -0.74
CNIH4-202ENST00000366857 BCS1LQ9Y276 419 aa10.44□□□□□ -0.74
CNIH4-202ENST00000366857 ATP8B3O60423 1300 aa10.44□□□□□ -0.74
CNIH4-202ENST00000366857 RBM47A0AV96 593 aaKnown RBP10.44□□□□□ -0.74
CNIH4-202ENST00000366857 AKAP17AQ02040 695 aaKnown RBP10.44□□□□□ -0.74
CNIH4-202ENST00000366857 KRT31Q15323 416 aa10.44□□□□□ -0.74
CNIH4-202ENST00000366857 LARP4BQ92615 738 aaKnown RBP10.44□□□□□ -0.74
CNIH4-202ENST00000366857 ERGIC2Q96RQ1 377 aa10.44□□□□□ -0.74
CNIH4-202ENST00000366857 KIAA1671Q9BY89 1806 aa10.44□□□□□ -0.74
CNIH4-202ENST00000366857 NLRC5Q86WI3 1866 aa10.44□□□□□ -0.74
CNIH4-202ENST00000366857 GLTPD2A6NH11 291 aa10.44□□□□□ -0.74
CNIH4-202ENST00000366857 FAM189A1O60320 539 aa10.44□□□□□ -0.74
CNIH4-202ENST00000366857 TKFCQ3LXA3 575 aa10.44□□□□□ -0.74
CNIH4-202ENST00000366857 RPAP3Q9H6T3 665 aaPredicted RBP10.44□□□□□ -0.74
CNIH4-202ENST00000366857 RABGAP1Q9Y3P9 1069 aa10.44□□□□□ -0.74
CNIH4-202ENST00000366857 PASKQ96RG2 1323 aa10.44□□□□□ -0.74
CNIH4-202ENST00000366857 TRIM49BA6NDI0 452 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 SPATA31C2B4DYI2 1134 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 ATP9AO75110 1047 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 TNNI2P48788 182 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 PPATQ06203 517 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 MCM6Q14566 821 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 XRRA1Q6P2D8 792 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 LMO3Q8TAP4 145 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 CHURC1Q8WUH1 139 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 CNKSR2Q8WXI2 1034 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 TMX4Q9H1E5 349 aaPredicted RBP10.43□□□□□ -0.74
CNIH4-202ENST00000366857 VAT1LQ9HCJ6 419 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 SIX2Q9NPC8 291 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 A0A1W2PQJ5 194 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 CDK17Q00537 523 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 CEP55Q53EZ4 464 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 LINC01465Q8N7H1 131 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 JDP2Q8WYK2 163 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 DDX12PQ92771 950 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 KIFC2Q96AC6 838 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 ZNF830Q96NB3 372 aaPredicted RBP10.43□□□□□ -0.74
CNIH4-202ENST00000366857 PCYT2Q99447 389 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 NTPCRQ9BSD7 190 aaKnown RBP10.43□□□□□ -0.74
CNIH4-202ENST00000366857 NFE2L3Q9Y4A8 694 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 SYNRGQ9UMZ2 1314 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 BIN1O00499 593 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 GUCY2CP25092 1073 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 HOXA13P31271 388 aaPredicted RBP10.43□□□□□ -0.74
CNIH4-202ENST00000366857 CLDN10P78369 228 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 SETQ01105 290 aaPredicted RBP10.43□□□□□ -0.74
CNIH4-202ENST00000366857 UGCGQ16739 394 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 FAM133AQ8N9E0 248 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 BAP1Q92560 729 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 HPS3Q969F9 1004 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 PDCD2LQ9BRP1 358 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 WDR11Q9BZH6 1224 aa10.43□□□□□ -0.74
CNIH4-202ENST00000366857 SMTNL1A8MU46 457 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 ADM5C9JUS6 153 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 MAPTP10636 758 aaKnown RBP10.42□□□□□ -0.74
CNIH4-202ENST00000366857 TARBP2Q15633 366 aaKnown RBP10.42□□□□□ -0.74
CNIH4-202ENST00000366857 RINT1Q6NUQ1 792 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 PANX2Q96RD6 677 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 RUSC1Q9BVN2 902 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 TXNRD2Q9NNW7 524 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 KCND2Q9NZV8 630 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 IFNKQ9P0W0 207 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 SYNGAP1Q96PV0 1343 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 PTPRDP23468 1912 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 POTEB3A0JP26 581 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 ZBTB39O15060 712 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 PMM2O15305 246 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 RBM5P52756 815 aaKnown RBP eCLIP10.42□□□□□ -0.74
CNIH4-202ENST00000366857 COASYQ13057 564 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 POTEBQ6S5H4 581 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 ARHGAP27Q6ZUM4 889 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 RIOX2Q8IUF8 465 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 EIF2AK1Q9BQI3 630 aaKnown RBP10.42□□□□□ -0.74
CNIH4-202ENST00000366857 SH2D4AQ9H788 454 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 KDM3AQ9Y4C1 1321 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 DOCK3Q8IZD9 2030 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 COL4A6Q14031 1691 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 H7C1D1 291 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 RBAK-RBAKDNI3L0D1 243 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 MPHOSPH10O00566 681 aaKnown RBP10.42□□□□□ -0.74
CNIH4-202ENST00000366857 EYA4O95677 639 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 CCNE1P24864 410 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 CCDC186Q7Z3E2 898 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 C12orf56Q8IXR9 622 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 ZNF526Q8TF50 670 aaPredicted RBP10.42□□□□□ -0.74
CNIH4-202ENST00000366857 STAMQ92783 540 aa10.42□□□□□ -0.74
CNIH4-202ENST00000366857 TAF1DQ9H5J8 278 aaPredicted RBP10.42□□□□□ -0.74
CNIH4-202ENST00000366857 SCN10AQ9Y5Y9 1956 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms