RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 HSPA6P17066 643 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 GOLGA8FQ08AF8 430 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 GOLGA8DPQ0D2H9 430 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 SLFN13Q68D06 897 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 CELF1Q92879 486 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 PIGSQ96S52 555 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 NLRC4Q9NPP4 1024 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 THEGQ9P2T0 379 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 TEX33O43247 280 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 GCNT3O95395 438 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 PRDX5P30044 214 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 TROAPQ12815 778 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 RCSD1Q6JBY9 416 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 RASGRP4Q8TDF6 673 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 DCAF4Q8WV16 495 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 FAN1Q9Y2M0 1017 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 SERPINB2P05120 415 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 RASSF2P50749 326 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 SMTNP53814 917 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 FIGNQ5HY92 759 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 PEX26Q7Z412 305 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 MYCT1Q8N699 235 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 ACRBPQ8NEB7 543 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 RAD54LQ92698 747 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 WDR11Q9BZH6 1224 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 ABCB6Q9NP58 842 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 GDAQ9Y2T3 454 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 UBAP1LF5GYI3 381 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 PPFIA2O75334 1257 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 H2AFXP16104 143 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 PRR16Q569H4 304 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 FAM20AQ96MK3 541 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 PPP1R9AQ9ULJ8 1098 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 MRC1P22897 1456 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 TCHHQ07283 1943 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 H0YIN7 160 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 PSMC2P35998 433 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 TBX2Q13207 712 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 GIMAP8Q8ND71 665 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 TEKT3Q9BXF9 490 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 NUF2Q9BZD4 464 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 FRMPD2Q68DX3 1309 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 GRID2IPA4D2P6 1211 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 PPP1R3GB7ZBB8 358 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 ATP2A2P16615 1042 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 IRX1P78414 480 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 TRPC3Q13507 836 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 INTS5Q6P9B9 1019 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 NELFCDQ8IXH7 590 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 VGLL2Q8N8G2 317 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 SH3RF3Q8TEJ3 882 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 EMILIN3Q9NT22 766 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 A0A0G2JLW4 131 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 SSU72P8A0A1W2PR75 194 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 TTC36A6NLP5 189 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 CCDC188H7C350 402 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 MYO1CO00159 1063 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 FOXN1O15353 648 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 ZNF18P17022 549 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 LMNB1P20700 586 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 ALCAMQ13740 583 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 EXOC3L4Q17RC7 722 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 ILDR1Q86SU0 546 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 RIOK1Q9BRS2 568 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 PDE11AQ9HCR9 933 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 BCL9O00512 1426 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 NID2Q14112 1375 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 CYP2D7A0A087X1C5 515 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 ATP2A1O14983 1001 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 SEC31AO94979 1220 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 KIF11P52732 1056 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 IRX4P78413 519 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 DYNC1I2Q13409 638 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 PPP1R2P3Q6NXS1 205 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 LRRC47Q8N1G4 583 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 HAUS1Q96CS2 278 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 PPEF1O14829 653 aaPredicted RBP5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 USP11P51784 963 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 HSP90AA5PQ58FG0 334 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 SH3RF1Q7Z6J0 888 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 CCDC25Q86WR0 208 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 VPS52Q8N1B4 723 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 TRIM6Q9C030 488 aaPredicted RBP5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 TMEM206Q9H813 350 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 PI4KBQ9UBF8 816 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 KIAA1024Q9UPX6 916 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 CLTAP09496 248 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 TOB1P50616 345 aaPredicted RBP5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 CDK17Q00537 523 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 CC2D2BQ6DHV5 1058 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 USP17L2Q6R6M4 530 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 LRRC43Q8N309 656 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 ANKS1AQ92625 1134 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 HGSO14964 777 aaPredicted RBP5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 PLA2G4BP0C869 781 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 POLR2MP0CAP2 368 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 FXR2P51116 673 aaKnown RBP eCLIP5.84□□□□□ -1.475e-7■■■■■ 27.7
CDC42BPA-204ENST00000366767 USP14P54578 494 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 TBC1D9BQ66K14 1250 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 ARMC9Q7Z3E5 817 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms