RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 WWC2Q6AWC2 1192 aa15.72■□□□□ 0.11
TNFRSF1A-202ENST00000366159 SYNE3Q6ZMZ3 975 aa15.72■□□□□ 0.11
TNFRSF1A-202ENST00000366159 CYFIP1Q7L576 1253 aa15.72■□□□□ 0.11
TNFRSF1A-202ENST00000366159 TEX2Q8IWB9 1127 aa15.72■□□□□ 0.11
TNFRSF1A-202ENST00000366159 FBXL16Q8N461 479 aa15.72■□□□□ 0.11
TNFRSF1A-202ENST00000366159 CCDC155Q8N6L0 562 aa15.72■□□□□ 0.11
TNFRSF1A-202ENST00000366159 TUT1Q9H6E5 874 aaKnown RBP15.72■□□□□ 0.11
TNFRSF1A-202ENST00000366159 MSRAQ9UJ68 235 aa15.72■□□□□ 0.11
TNFRSF1A-202ENST00000366159 PCDHA11Q9Y5I1 949 aa15.72■□□□□ 0.11
TNFRSF1A-202ENST00000366159 REV3LO60673 3130 aa15.72■□□□□ 0.11
TNFRSF1A-202ENST00000366159 ZBTB43O43298 467 aa15.71■□□□□ 0.11
TNFRSF1A-202ENST00000366159 NBNO60934 754 aa15.71■□□□□ 0.11
TNFRSF1A-202ENST00000366159 ATP9AO75110 1047 aa15.71■□□□□ 0.11
TNFRSF1A-202ENST00000366159 PARNO95453 639 aaKnown RBP15.71■□□□□ 0.11
TNFRSF1A-202ENST00000366159 FOSL2P15408 326 aa15.71■□□□□ 0.11
TNFRSF1A-202ENST00000366159 KCNA2P16389 499 aa15.71■□□□□ 0.11
TNFRSF1A-202ENST00000366159 ATP2A2P16615 1042 aaKnown RBP15.71■□□□□ 0.11
TNFRSF1A-202ENST00000366159 CDC27P30260 824 aa15.71■□□□□ 0.11
TNFRSF1A-202ENST00000366159 RABGGTBP53611 331 aa15.71■□□□□ 0.11
TNFRSF1A-202ENST00000366159 UBE2SQ16763 222 aa15.71■□□□□ 0.11
TNFRSF1A-202ENST00000366159 LRRC8DQ7L1W4 858 aa15.71■□□□□ 0.11
TNFRSF1A-202ENST00000366159 SERINC5Q86VE9 423 aa15.71■□□□□ 0.11
TNFRSF1A-202ENST00000366159 MAFAQ8NHW3 353 aaPredicted RBP15.71■□□□□ 0.11
TNFRSF1A-202ENST00000366159 PHOSPHO2Q8TCD6 241 aa15.71■□□□□ 0.11
TNFRSF1A-202ENST00000366159 GPRASP2Q96D09 838 aa15.71■□□□□ 0.11
TNFRSF1A-202ENST00000366159 USP26Q9BXU7 913 aa15.71■□□□□ 0.11
TNFRSF1A-202ENST00000366159 SNX14Q9Y5W7 946 aa15.71■□□□□ 0.11
TNFRSF1A-202ENST00000366159 UBIAD1Q9Y5Z9 338 aa15.71■□□□□ 0.11
TNFRSF1A-202ENST00000366159 BAIAP3O94812 1187 aa15.7■□□□□ 0.1
TNFRSF1A-202ENST00000366159 ACTN1P12814 892 aa15.7■□□□□ 0.1
TNFRSF1A-202ENST00000366159 CPA1P15085 419 aa15.7■□□□□ 0.1
TNFRSF1A-202ENST00000366159 MYOGP15173 224 aa15.7■□□□□ 0.1
TNFRSF1A-202ENST00000366159 ADAM17P78536 824 aa15.7■□□□□ 0.1
TNFRSF1A-202ENST00000366159 NID2Q14112 1375 aa15.7■□□□□ 0.1
TNFRSF1A-202ENST00000366159 MBTPS1Q14703 1052 aa15.7■□□□□ 0.1
TNFRSF1A-202ENST00000366159 RTN1Q16799 776 aa15.7■□□□□ 0.1
TNFRSF1A-202ENST00000366159 TCTN1Q2MV58 587 aa15.7■□□□□ 0.1
TNFRSF1A-202ENST00000366159 NLRX1Q86UT6 975 aa15.7■□□□□ 0.1
TNFRSF1A-202ENST00000366159 AGXT2Q9BYV1 514 aa15.7■□□□□ 0.1
TNFRSF1A-202ENST00000366159 NKX2-4Q9H2Z4 354 aa15.7■□□□□ 0.1
TNFRSF1A-202ENST00000366159 PCDHA6Q9UN73 950 aa15.7■□□□□ 0.1
TNFRSF1A-202ENST00000366159 PCDHA8Q9Y5H6 950 aa15.7■□□□□ 0.1
TNFRSF1A-202ENST00000366159 KLF18A0A0U1RQI7 1052 aa15.69■□□□□ 0.1
TNFRSF1A-202ENST00000366159 ZBBXA8MT70 800 aa15.69■□□□□ 0.1
TNFRSF1A-202ENST00000366159 STXBP3O00186 592 aa15.69■□□□□ 0.1
TNFRSF1A-202ENST00000366159 SMIM10L2AP0DMW4 78 aa15.69■□□□□ 0.1
TNFRSF1A-202ENST00000366159 SMIM10L2BP0DMW5 78 aa15.69■□□□□ 0.1
TNFRSF1A-202ENST00000366159 CLK2P49760 499 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1A-202ENST00000366159 ZNF618Q5T7W0 954 aa15.69■□□□□ 0.1
TNFRSF1A-202ENST00000366159 PPP1R18Q6NYC8 613 aa15.69■□□□□ 0.1
TNFRSF1A-202ENST00000366159 HEATR3Q7Z4Q2 680 aa15.69■□□□□ 0.1
TNFRSF1A-202ENST00000366159 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.69■□□□□ 0.1
TNFRSF1A-202ENST00000366159 SLC9A7Q96T83 725 aa15.69■□□□□ 0.1
TNFRSF1A-202ENST00000366159 RNPEPQ9H4A4 650 aa15.69■□□□□ 0.1
TNFRSF1A-202ENST00000366159 SLC28A3Q9HAS3 691 aa15.69■□□□□ 0.1
TNFRSF1A-202ENST00000366159 RIC8AQ9NPQ8 531 aa15.69■□□□□ 0.1
TNFRSF1A-202ENST00000366159 V9GY48 417 aaPredicted RBP15.69■□□□□ 0.1
TNFRSF1A-202ENST00000366159 PTPRSQ13332 1948 aa15.69■□□□□ 0.1
TNFRSF1A-202ENST00000366159 GOLGA8AA7E2F4 631 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 GOLGA8BA8MQT2 603 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 hCG_1984214I3L0E3 225 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 NOP56O00567 594 aaKnown RBP15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 MAFGO15525 162 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 EPB41L2O43491 1005 aaKnown RBP15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 ADD1P35611 737 aaKnown RBP15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 ADGRE1Q14246 886 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 ZNF713Q8N859 430 aaPredicted RBP15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 GIMAP8Q8ND71 665 aaPredicted RBP15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 CDHR1Q96JP9 859 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 FTOQ9C0B1 505 aaKnown RBP eCLIP15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 PRDM12Q9H4Q4 367 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 JADE2Q9NQC1 790 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 BARHL2Q9NY43 387 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 GSTTP1A0A1W2PQM5 241 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 C17orf102A2RUQ5 167 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 SPDYE3A6NKU9 549 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 RBAK-RBAKDNI3L0D1 243 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 DLL1O00548 723 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 TREHO43280 583 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 EVCP57679 992 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 APOBRQ0VD83 1088 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 MKRN4PQ13434 485 aaPredicted RBP15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 CNKSR3Q6P9H4 555 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 Q6ZUG5 572 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 TRIM50Q86XT4 487 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 HERC6Q8IVU3 1022 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 JAKMIP1Q96N16 626 aaKnown RBP15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 CUL9Q8IWT3 2517 aa15.68■□□□□ 0.1
TNFRSF1A-202ENST00000366159 FOSP01100 380 aaPredicted RBP15.67■□□□□ 0.1
TNFRSF1A-202ENST00000366159 RPS6KB1P23443 525 aa15.67■□□□□ 0.1
TNFRSF1A-202ENST00000366159 NAPAP54920 295 aa15.67■□□□□ 0.1
TNFRSF1A-202ENST00000366159 WDR5P61964 334 aaKnown RBP15.67■□□□□ 0.1
TNFRSF1A-202ENST00000366159 MTMR1Q13613 665 aa15.67■□□□□ 0.1
TNFRSF1A-202ENST00000366159 PFKFB3Q16875 520 aaPredicted RBP15.67■□□□□ 0.1
TNFRSF1A-202ENST00000366159 USP38Q8NB14 1042 aa15.67■□□□□ 0.1
TNFRSF1A-202ENST00000366159 CYP2W1Q8TAV3 490 aa15.67■□□□□ 0.1
TNFRSF1A-202ENST00000366159 BRF1Q92994 677 aa15.67■□□□□ 0.1
TNFRSF1A-202ENST00000366159 ATP6V0A1Q93050 837 aa15.67■□□□□ 0.1
TNFRSF1A-202ENST00000366159 SMCO2A6NFE2 343 aa15.66■□□□□ 0.1
TNFRSF1A-202ENST00000366159 CAND2O75155 1236 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms