RNA–Protein interactions for RNA: ENST00000364426.1

RNU4-41P-201, Transcript of RNA, U4 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU4-41P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-41P-201ENST00000364426 CCDC9Q9Y3X0 531 aaKnown RBP2.77□□□□□ -1.97
RNU4-41P-201ENST00000364426 PCDHA2Q9Y5H9 948 aa2.77□□□□□ -1.97
RNU4-41P-201ENST00000364426 MRVI1Q9Y6F6 885 aa2.77□□□□□ -1.97
RNU4-41P-201ENST00000364426 BAZ1AQ9NRL2 1556 aaPredicted RBP2.77□□□□□ -1.97
RNU4-41P-201ENST00000364426 ARHGEF11O15085 1522 aa2.77□□□□□ -1.97
RNU4-41P-201ENST00000364426 AGRPO00253 132 aa2.76□□□□□ -1.97
RNU4-41P-201ENST00000364426 KRIT1O00522 736 aa2.76□□□□□ -1.97
RNU4-41P-201ENST00000364426 DDAH1O94760 285 aa2.76□□□□□ -1.97
RNU4-41P-201ENST00000364426 ETFBP38117 255 aa2.76□□□□□ -1.97
RNU4-41P-201ENST00000364426 KCNJ6P48051 423 aa2.76□□□□□ -1.97
RNU4-41P-201ENST00000364426 MLLT6P55198 1093 aaPredicted RBP2.76□□□□□ -1.97
RNU4-41P-201ENST00000364426 PPP2CBP62714 309 aa2.76□□□□□ -1.97
RNU4-41P-201ENST00000364426 PPP2CAP67775 309 aa2.76□□□□□ -1.97
RNU4-41P-201ENST00000364426 GNL2Q13823 731 aaKnown RBP2.76□□□□□ -1.97
RNU4-41P-201ENST00000364426 CDSNQ15517 529 aa2.76□□□□□ -1.97
RNU4-41P-201ENST00000364426 HABP4Q5JVS0 413 aaKnown RBP2.76□□□□□ -1.97
RNU4-41P-201ENST00000364426 PRAMEF18Q5VWM3 479 aa2.76□□□□□ -1.97
RNU4-41P-201ENST00000364426 TRIM48Q8IWZ4 208 aa2.76□□□□□ -1.97
RNU4-41P-201ENST00000364426 DTX3Q8N9I9 347 aa2.76□□□□□ -1.97
RNU4-41P-201ENST00000364426 TINF2Q9BSI4 451 aa2.76□□□□□ -1.97
RNU4-41P-201ENST00000364426 TMEM168Q9H0V1 697 aa2.76□□□□□ -1.97
RNU4-41P-201ENST00000364426 ZNF408Q9H9D4 720 aa2.76□□□□□ -1.97
RNU4-41P-201ENST00000364426 L2HGDHQ9H9P8 463 aa2.76□□□□□ -1.97
RNU4-41P-201ENST00000364426 CLDND1Q9NY35 253 aa2.76□□□□□ -1.97
RNU4-41P-201ENST00000364426 WASF3Q9UPY6 502 aa2.76□□□□□ -1.97
RNU4-41P-201ENST00000364426 ZNF536O15090 1300 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 A0A1W2PQU0 124 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 GPR42O15529 346 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 AKAP8O43823 692 aaKnown RBP2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 KLHL18O94889 574 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 GJB6O95452 261 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 CYP1A1P04798 512 aaPredicted RBP2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 FGFR1P11362 822 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 ERCC5P28715 1186 aaPredicted RBP2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 GRIA2P42262 883 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 PPP2R2AP63151 447 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 NFATC3Q12968 1075 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 ICAM4Q14773 271 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 SLFN13Q68D06 897 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 OTOP3Q7RTS5 596 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 LIMS2Q7Z4I7 341 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 KBTBD2Q8IY47 623 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 CHST13Q8NET6 341 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 UHMK1Q8TAS1 419 aaKnown RBP2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 IGDCC4Q8TDY8 1250 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 CDK5RAP1Q96SZ6 601 aaKnown RBP2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 GMLQ99445 158 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 ZFYVE21Q9BQ24 234 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 DLL4Q9NR61 685 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 FTSJ1Q9UET6 329 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 ADAM29Q9UKF5 820 aa2.75□□□□□ -1.97
RNU4-41P-201ENST00000364426 UNC13AQ9UPW8 1703 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 IQCA1LA6NCM1 817 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 PATE3B3GLJ2 98 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 KLF4O43474 513 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 DLX3O60479 287 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 MSCO60682 206 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 KNG1P01042 644 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 TCF3P15923 654 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 FAHP16930 419 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 EPHA5P54756 1037 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 ARID5AQ03989 594 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 R3HDM1Q15032 1099 aaKnown RBP2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 DDR2Q16832 855 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 KIZQ2M2Z5 673 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 LBX2Q6XYB7 198 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 ARHGEF18Q6ZSZ5 1173 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 CIR1Q86X95 450 aaPredicted RBP2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 MCF2L2Q86YR7 1114 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 SLC43A3Q8NBI5 491 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 PIP4K2CQ8TBX8 421 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 DCAF4Q8WV16 495 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 CLEC4DQ8WXI8 215 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 KISS1RQ969F8 398 aaPredicted RBP2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 ZNF669Q96BR6 464 aaPredicted RBP2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 AJUBAQ96IF1 538 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 CHAMP1Q96JM3 812 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 ZSWIM3Q96MP5 696 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 IER2Q9BTL4 223 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 KLC2Q9H0B6 622 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 MEGF9Q9H1U4 602 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 SEMA4AQ9H3S1 761 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 SEC61A2Q9H9S3 476 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 BARX1Q9HBU1 254 aaPredicted RBP2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 ST6GALNAC2Q9UJ37 374 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 CROTQ9UKG9 612 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 TESMINQ9Y4I5 508 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 NUB1Q9Y5A7 615 aa2.74□□□□□ -1.97
RNU4-41P-201ENST00000364426 ERCC6Q03468 1493 aa2.73□□□□□ -1.97
RNU4-41P-201ENST00000364426 NPEPPSL1A6NEC2 478 aa2.73□□□□□ -1.97
RNU4-41P-201ENST00000364426 TACR2P21452 398 aa2.73□□□□□ -1.97
RNU4-41P-201ENST00000364426 SELENOPP49908 381 aa2.73□□□□□ -1.97
RNU4-41P-201ENST00000364426 GPR85P60893 370 aa2.73□□□□□ -1.97
RNU4-41P-201ENST00000364426 SPIRE1Q08AE8 756 aa2.73□□□□□ -1.97
RNU4-41P-201ENST00000364426 HSP90AA2PQ14568 343 aaPredicted RBP2.73□□□□□ -1.97
RNU4-41P-201ENST00000364426 SMAD2Q15796 467 aaKnown RBP2.73□□□□□ -1.97
RNU4-41P-201ENST00000364426 NTRK3Q16288 839 aa2.73□□□□□ -1.97
RNU4-41P-201ENST00000364426 PAN2Q504Q3 1202 aaKnown RBP2.73□□□□□ -1.97
RNU4-41P-201ENST00000364426 VASNQ6EMK4 673 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms