RNA–Protein interactions for RNA: ENST00000363904.1

RNU6-478P-201, Transcript of RNA, U6 small nuclear 478, pseudogene, humanhuman

BASIC

Gene RNU6-478P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-478P-201ENST00000363904 SIMC1Q8NDZ2 872 aa1.17□□□□□ -2.22
RNU6-478P-201ENST00000363904 C16orf92Q96LL3 132 aa1.17□□□□□ -2.22
RNU6-478P-201ENST00000363904 HIRIP3Q9BW71 556 aaPredicted RBP1.17□□□□□ -2.22
RNU6-478P-201ENST00000363904 CARD11Q9BXL7 1154 aa1.17□□□□□ -2.22
RNU6-478P-201ENST00000363904 ZNF768Q9H5H4 540 aaKnown RBP1.17□□□□□ -2.22
RNU6-478P-201ENST00000363904 GULP1Q9UBP9 304 aa1.17□□□□□ -2.22
RNU6-478P-201ENST00000363904 PUF60Q9UHX1 559 aaKnown RBP1.17□□□□□ -2.22
RNU6-478P-201ENST00000363904 PRSS47A8MTI9 375 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 RGS13O14921 159 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 SGSM2O43147 1006 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 FBXO21O94952 628 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 COL6A1P12109 1028 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 MAN2A2P49641 1150 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 KRTAP10-1P60331 282 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 RBM10P98175 930 aaKnown RBP1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 FKBP4Q02790 459 aaKnown RBP eCLIP1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 RPL6Q02878 288 aaKnown RBP1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 RAD51AP2Q09MP3 1159 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 NOLC1Q14978 699 aaKnown RBP eCLIP1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 SMAD2Q15796 467 aaKnown RBP1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 TIGD2Q4W5G0 525 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 LCE1CQ5T751 118 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 LCE1BQ5T7P3 118 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 TMEM164Q5U3C3 297 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 SPTY2D1Q68D10 685 aaPredicted RBP1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 Q6YL49 198 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 LRP10Q7Z4F1 713 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 ZDHHC17Q8IUH5 632 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 ANKRD35Q8N283 1001 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 LCORLQ8N3X6 602 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 SPEM1Q8N4L4 309 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 SEC14L1Q92503 715 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 CAVIN3Q969G5 261 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 TOE1Q96GM8 510 aaKnown RBP1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 TMEM176AQ96HP8 235 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 MTA3Q9BTC8 594 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 NIF3L1Q9GZT8 377 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 MIR1-1HGQ9H1L0 117 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 NELFAQ9H3P2 528 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 MSL2Q9HCI7 577 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 TLK1Q9UKI8 766 aa1.16□□□□□ -2.22
RNU6-478P-201ENST00000363904 ZNF521Q96K83 1311 aa1.15□□□□□ -2.22
RNU6-478P-201ENST00000363904 NDUFB5O43674 189 aa1.15□□□□□ -2.23
RNU6-478P-201ENST00000363904 MATN4O95460 622 aa1.15□□□□□ -2.23
RNU6-478P-201ENST00000363904 FUCA1P04066 466 aa1.15□□□□□ -2.23
RNU6-478P-201ENST00000363904 CHGBP05060 677 aa1.15□□□□□ -2.23
RNU6-478P-201ENST00000363904 SCNN1GP51170 649 aa1.15□□□□□ -2.23
RNU6-478P-201ENST00000363904 RRADP55042 308 aa1.15□□□□□ -2.23
RNU6-478P-201ENST00000363904 EZH2Q15910 746 aaKnown RBP1.15□□□□□ -2.23
RNU6-478P-201ENST00000363904 KIAA1614Q5VZ46 1190 aa1.15□□□□□ -2.23
RNU6-478P-201ENST00000363904 TMC5Q6UXY8 1006 aa1.15□□□□□ -2.23
RNU6-478P-201ENST00000363904 CAGE1Q8TC20 777 aa1.15□□□□□ -2.23
RNU6-478P-201ENST00000363904 TMC1Q8TDI8 760 aa1.15□□□□□ -2.23
RNU6-478P-201ENST00000363904 ZNF512BQ96KM6 892 aaPredicted RBP1.15□□□□□ -2.23
RNU6-478P-201ENST00000363904 MKRN2Q9H000 416 aaKnown RBP1.15□□□□□ -2.23
RNU6-478P-201ENST00000363904 KATNBL1Q9H079 304 aa1.15□□□□□ -2.23
RNU6-478P-201ENST00000363904 KIAA1586Q9HCI6 787 aa1.15□□□□□ -2.23
RNU6-478P-201ENST00000363904 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP1.15□□□□□ -2.23
RNU6-478P-201ENST00000363904 REV1Q9UBZ9 1251 aa1.15□□□□□ -2.23
RNU6-478P-201ENST00000363904 CGB1A6NKQ9 187 aa1.14□□□□□ -2.23
RNU6-478P-201ENST00000363904 CLEC3AO75596 197 aa1.14□□□□□ -2.23
RNU6-478P-201ENST00000363904 UBOX5O94941 541 aa1.14□□□□□ -2.23
RNU6-478P-201ENST00000363904 CKMP06732 381 aa1.14□□□□□ -2.23
RNU6-478P-201ENST00000363904 RAG1P15918 1043 aa1.14□□□□□ -2.23
RNU6-478P-201ENST00000363904 PDE6AP16499 860 aa1.14□□□□□ -2.23
RNU6-478P-201ENST00000363904 UBTFP17480 764 aaKnown RBP1.14□□□□□ -2.23
RNU6-478P-201ENST00000363904 MAPK8P45983 427 aa1.14□□□□□ -2.23
RNU6-478P-201ENST00000363904 LARP7Q4G0J3 582 aaKnown RBP eCLIP1.14□□□□□ -2.23
RNU6-478P-201ENST00000363904 Q6ZRM9 215 aa1.14□□□□□ -2.23
RNU6-478P-201ENST00000363904 ARHGEF25Q86VW2 580 aa1.14□□□□□ -2.23
RNU6-478P-201ENST00000363904 SH2D3CQ8N5H7 860 aa1.14□□□□□ -2.23
RNU6-478P-201ENST00000363904 JARID2Q92833 1246 aaPredicted RBP1.14□□□□□ -2.23
RNU6-478P-201ENST00000363904 ZNF48Q96MX3 618 aaPredicted RBP1.14□□□□□ -2.23
RNU6-478P-201ENST00000363904 SRRTQ9BXP5 876 aaKnown RBP1.14□□□□□ -2.23
RNU6-478P-201ENST00000363904 PRR13Q9NZ81 148 aa1.14□□□□□ -2.23
RNU6-478P-201ENST00000363904 ARHGAP20Q9P2F6 1191 aa1.14□□□□□ -2.23
RNU6-478P-201ENST00000363904 PROCRQ9UNN8 238 aa1.14□□□□□ -2.23
RNU6-478P-201ENST00000363904 NOTCH4Q99466 2003 aa1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 H0Y8X5 98 aa1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 MATN2O00339 956 aa1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 ARHGAP6O43182 974 aa1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 PPP1R11O60927 126 aaPredicted RBP1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 BPNT1O95861 308 aa1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 KNG1P01042 644 aa1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 TYRP1P17643 537 aa1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 NR4A1P22736 598 aa1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 RPS26P62854 115 aaKnown RBP1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 RABL3Q5HYI8 236 aa1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 CFAP70Q5T0N1 1121 aa1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 PHF19Q5T6S3 580 aa1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 C11orf87Q6NUJ2 197 aa1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 TEPPQ6URK8 271 aa1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 KRTAP5-5Q701N2 237 aaPredicted RBP1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 SV2BQ7L1I2 683 aa1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 GPRIN1Q7Z2K8 1008 aa1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 BMP8AQ7Z5Y6 402 aa1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 ANKRD24Q8TF21 1146 aa1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 MPHOSPH9Q99550 1183 aa1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 DUSP26Q9BV47 211 aa1.13□□□□□ -2.23
RNU6-478P-201ENST00000363904 SRCIN1Q9C0H9 1055 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms