RNA–Protein interactions for RNA: ENST00000363690.1

RNU6-288P-201, Transcript of RNA, U6 small nuclear 288, pseudogene, humanhuman

BASIC

Gene RNU6-288P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-288P-201ENST00000363690 LSSP48449 732 aa4.33□□□□□ -1.72
RNU6-288P-201ENST00000363690 MAPKAPK2P49137 400 aa4.33□□□□□ -1.72
RNU6-288P-201ENST00000363690 DSG1Q02413 1049 aa4.33□□□□□ -1.72
RNU6-288P-201ENST00000363690 PCBP1Q15365 356 aaKnown RBP eCLIP4.33□□□□□ -1.72
RNU6-288P-201ENST00000363690 ZNF174Q15697 407 aa4.33□□□□□ -1.72
RNU6-288P-201ENST00000363690 STEAP3Q658P3 488 aa4.33□□□□□ -1.72
RNU6-288P-201ENST00000363690 ABHD17CQ6PCB6 329 aa4.33□□□□□ -1.72
RNU6-288P-201ENST00000363690 ARHGAP36Q6ZRI8 547 aa4.33□□□□□ -1.72
RNU6-288P-201ENST00000363690 EFHBQ8N7U6 833 aa4.33□□□□□ -1.72
RNU6-288P-201ENST00000363690 TSPAN17Q96FV3 270 aa4.33□□□□□ -1.72
RNU6-288P-201ENST00000363690 INTS4Q96HW7 963 aaKnown RBP4.33□□□□□ -1.72
RNU6-288P-201ENST00000363690 KCNJ15Q99712 375 aa4.33□□□□□ -1.72
RNU6-288P-201ENST00000363690 JAM3Q9BX67 310 aa4.33□□□□□ -1.72
RNU6-288P-201ENST00000363690 METTL14Q9HCE5 456 aaKnown RBP4.33□□□□□ -1.72
RNU6-288P-201ENST00000363690 ACSS2Q9NR19 701 aa4.33□□□□□ -1.72
RNU6-288P-201ENST00000363690 HOMER2Q9NSB8 354 aa4.33□□□□□ -1.72
RNU6-288P-201ENST00000363690 FBXL7Q9UJT9 491 aa4.33□□□□□ -1.72
RNU6-288P-201ENST00000363690 DBR1Q9UK59 544 aaKnown RBP4.33□□□□□ -1.72
RNU6-288P-201ENST00000363690 CBLCQ9ULV8 474 aa4.33□□□□□ -1.72
RNU6-288P-201ENST00000363690 COQ6Q9Y2Z9 468 aa4.33□□□□□ -1.72
RNU6-288P-201ENST00000363690 PTPDC1A2A3K4 754 aa4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 CYP17A1P05093 508 aa4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 MSL3P1P0C860 447 aa4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 PDE6AP16499 860 aa4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 KPNA1P52294 538 aaPredicted RBP4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 ERVFC1P60507 584 aa4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 YBX1P67809 324 aaKnown RBP4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 KCNMB1Q16558 191 aa4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 GPR158Q5T848 1215 aa4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 NBPF11Q86T75 865 aa4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 OSTM1Q86WC4 334 aa4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 DDX42Q86XP3 938 aaKnown RBP eCLIP4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 NME9Q86XW9 330 aa4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 SPATS2Q86XZ4 545 aaKnown RBP4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 ZZZ3Q8IYH5 903 aa4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 SMC1BQ8NDV3 1235 aa4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 PIP4K2CQ8TBX8 421 aa4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 WDR66Q8TBY9 1149 aa4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 CEP89Q96ST8 783 aa4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 PUS7LQ9H0K6 701 aaKnown RBP4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 C19orf44Q9H6X5 657 aa4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 HSPBP1Q9NZL4 362 aa4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 PPARGC1AQ9UBK2 798 aaKnown RBP4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 ASH2LQ9UBL3 628 aa4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 SRPK3Q9UPE1 567 aa4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 ATP23Q9Y6H3 246 aa4.32□□□□□ -1.72
RNU6-288P-201ENST00000363690 PHLDB1Q86UU1 1377 aa4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 GPR39O43194 453 aa4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 FKBP9O95302 570 aa4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 ITGB5P18084 799 aa4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 POU3F3P20264 500 aaPredicted RBP4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 IL2P60568 153 aa4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 HERVK_113P62684 666 aa4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 EXOSC10Q01780 885 aaKnown RBP4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 STRN3Q13033 797 aa4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 TIGD5Q53EQ6 642 aa4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 CC2D1AQ6P1N0 951 aaPredicted RBP4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 KCTD1Q719H9 257 aa4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 FKBP9P1Q75LS8 142 aa4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 ZSWIM9Q86XI8 627 aa4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 PRPF38AQ8NAV1 312 aaKnown RBP4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 E2F7Q96AV8 911 aa4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 RNF32Q9H0A6 362 aa4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 SMURF1Q9HCE7 757 aa4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 KCNH7Q9NS40 1196 aa4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 MYOTQ9UBF9 498 aa4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 SPEF1Q9Y4P9 236 aa4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 PCDHB4Q9Y5E5 795 aa4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 SPO11Q9Y5K1 396 aa4.31□□□□□ -1.72
RNU6-288P-201ENST00000363690 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 F8W031 263 aaPredicted RBP4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 MAN2B1O00754 1011 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 SGSM2O43147 1006 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 AMY2AP04746 511 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 COL6A2P12110 1019 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 AMY2BP19961 511 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 TACR1P25103 407 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 SDHAP31040 664 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 FNTBP49356 437 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 JAM2P57087 298 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 SESN3P58005 492 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 PHC1P78364 1004 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 IRF9Q00978 393 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 ADCY1Q08828 1119 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 STAT4Q14765 748 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 RAB3GAP1Q15042 981 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 TARBP2Q15633 366 aaKnown RBP4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 SEPT7Q16181 437 aaKnown RBP4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 ATP13A4Q4VNC1 1196 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 ZC3H14Q6PJT7 736 aaKnown RBP4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 MILR1Q7Z6M3 343 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 FERMT3Q86UX7 667 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 KRTAP1-3Q8IUG1 177 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 CISD2Q8N5K1 135 aaKnown RBP4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 UBR7Q8N806 425 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 DLG3Q92796 817 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 MENTQ9BUN1 341 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 PCGF6Q9BYE7 350 aa4.3□□□□□ -1.72
RNU6-288P-201ENST00000363690 RNF38Q9H0F5 515 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms