RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 RNF10Q8N5U6 811 aaKnown RBP21■□□□□ 0.95
CMTM3-201ENST00000361909 ZDHHC15Q96MV8 337 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 CCDC43Q96MW1 224 aaKnown RBP21■□□□□ 0.95
CMTM3-201ENST00000361909 ZSCAN10Q96SZ4 725 aaPredicted RBP21■□□□□ 0.95
CMTM3-201ENST00000361909 RABEP2Q9H5N1 569 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 VEZTQ9HBM0 779 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 BRCA1P38398 1863 aaKnown RBP21■□□□□ 0.95
CMTM3-201ENST00000361909 F8W031 263 aaPredicted RBP20.99■□□□□ 0.95
CMTM3-201ENST00000361909 MAPKAPK5Q8IW41 473 aa20.99■□□□□ 0.95
CMTM3-201ENST00000361909 CCDC47Q96A33 483 aaKnown RBP20.99■□□□□ 0.95
CMTM3-201ENST00000361909 TRIM49BA6NDI0 452 aa20.99■□□□□ 0.95
CMTM3-201ENST00000361909 ZNF233A6NK53 670 aa20.99■□□□□ 0.95
CMTM3-201ENST00000361909 ERCC3P19447 782 aa20.99■□□□□ 0.95
CMTM3-201ENST00000361909 ATP1A2P50993 1020 aa20.99■□□□□ 0.95
CMTM3-201ENST00000361909 SNCBQ16143 134 aa20.99■□□□□ 0.95
CMTM3-201ENST00000361909 DALRD3Q5D0E6 543 aaKnown RBP20.99■□□□□ 0.95
CMTM3-201ENST00000361909 CCDC121Q6ZUS5 278 aa20.99■□□□□ 0.95
CMTM3-201ENST00000361909 CUEDC2Q9H467 287 aa20.99■□□□□ 0.95
CMTM3-201ENST00000361909 DISC1Q9NRI5 854 aa20.99■□□□□ 0.95
CMTM3-201ENST00000361909 DUSP10Q9Y6W6 482 aa20.99■□□□□ 0.95
CMTM3-201ENST00000361909 TNKSO95271 1327 aa20.98■□□□□ 0.95
CMTM3-201ENST00000361909 CRKP46108 304 aa20.98■□□□□ 0.95
CMTM3-201ENST00000361909 RNF187Q5TA31 235 aaPredicted RBP20.98■□□□□ 0.95
CMTM3-201ENST00000361909 ARHGAP27Q6ZUM4 889 aa20.98■□□□□ 0.95
CMTM3-201ENST00000361909 CMTR1Q8N1G2 835 aaKnown RBP20.98■□□□□ 0.95
CMTM3-201ENST00000361909 ZKSCAN3Q9BRR0 538 aa20.98■□□□□ 0.95
CMTM3-201ENST00000361909 SLC40A1Q9NP59 571 aa20.98■□□□□ 0.95
CMTM3-201ENST00000361909 SERPINA10Q9UK55 444 aa20.98■□□□□ 0.95
CMTM3-201ENST00000361909 MYH1P12882 1939 aa20.98■□□□□ 0.95
CMTM3-201ENST00000361909 GOLGA6L10A6NI86 522 aa20.97■□□□□ 0.95
CMTM3-201ENST00000361909 DDAH1O94760 285 aa20.97■□□□□ 0.95
CMTM3-201ENST00000361909 KRT14P02533 472 aa20.97■□□□□ 0.95
CMTM3-201ENST00000361909 GCFC2P16383 781 aaKnown RBP20.97■□□□□ 0.95
CMTM3-201ENST00000361909 SLC7A5Q01650 507 aa20.97■□□□□ 0.95
CMTM3-201ENST00000361909 NPY5RQ15761 445 aa20.97■□□□□ 0.95
CMTM3-201ENST00000361909 APOBEC3HQ6NTF7 200 aaKnown RBP20.97■□□□□ 0.95
CMTM3-201ENST00000361909 CATIPQ7Z7H3 387 aa20.97■□□□□ 0.95
CMTM3-201ENST00000361909 SH2D3CQ8N5H7 860 aa20.97■□□□□ 0.95
CMTM3-201ENST00000361909 CSGALNACT2Q8N6G5 542 aa20.97■□□□□ 0.95
CMTM3-201ENST00000361909 MYO3BQ8WXR4 1341 aa20.97■□□□□ 0.95
CMTM3-201ENST00000361909 RASSF10A6NK89 507 aa20.97■□□□□ 0.95
CMTM3-201ENST00000361909 YDJCA8MPS7 323 aa20.97■□□□□ 0.95
CMTM3-201ENST00000361909 ZNF263O14978 683 aa20.97■□□□□ 0.95
CMTM3-201ENST00000361909 PRDM1O75626 825 aa20.97■□□□□ 0.95
CMTM3-201ENST00000361909 SLC8A1P32418 973 aa20.97■□□□□ 0.95
CMTM3-201ENST00000361909 SCNN1DP51172 638 aa20.97■□□□□ 0.95
CMTM3-201ENST00000361909 KIF11P52732 1056 aa20.97■□□□□ 0.95
CMTM3-201ENST00000361909 CYP27A1Q02318 531 aa20.97■□□□□ 0.95
CMTM3-201ENST00000361909 ITGB3BPQ13352 177 aaPredicted RBP20.97■□□□□ 0.95
CMTM3-201ENST00000361909 CCDC178Q5BJE1 867 aa20.97■□□□□ 0.95
CMTM3-201ENST00000361909 ODF2LQ9ULJ1 636 aa20.97■□□□□ 0.95
CMTM3-201ENST00000361909 ABCB11O95342 1321 aa20.97■□□□□ 0.95
CMTM3-201ENST00000361909 WNT7AO00755 349 aa20.96■□□□□ 0.95
CMTM3-201ENST00000361909 EZRP15311 586 aaKnown RBP20.96■□□□□ 0.95
CMTM3-201ENST00000361909 CCNE1P24864 410 aa20.96■□□□□ 0.95
CMTM3-201ENST00000361909 GUCY1A3Q02108 690 aa20.96■□□□□ 0.95
CMTM3-201ENST00000361909 EVX2Q03828 476 aa20.96■□□□□ 0.95
CMTM3-201ENST00000361909 CRYMQ14894 314 aa20.96■□□□□ 0.95
CMTM3-201ENST00000361909 COBLL1Q53SF7 1204 aa20.96■□□□□ 0.95
CMTM3-201ENST00000361909 NFRKBQ6P4R8 1299 aa20.96■□□□□ 0.95
CMTM3-201ENST00000361909 ENAHQ8N8S7 591 aaPredicted RBP20.96■□□□□ 0.95
CMTM3-201ENST00000361909 CNOT6LQ96LI5 555 aaKnown RBP20.96■□□□□ 0.95
CMTM3-201ENST00000361909 PCMTD1Q96MG8 357 aaPredicted RBP20.96■□□□□ 0.95
CMTM3-201ENST00000361909 CD248Q9HCU0 757 aa20.96■□□□□ 0.95
CMTM3-201ENST00000361909 USP40Q9NVE5 1235 aa20.96■□□□□ 0.95
CMTM3-201ENST00000361909 PMS1P54277 932 aaKnown RBP20.96■□□□□ 0.95
CMTM3-201ENST00000361909 KIAA0825Q8IV33 1275 aa20.96■□□□□ 0.95
CMTM3-201ENST00000361909 LARGE2Q8N3Y3 721 aa20.96■□□□□ 0.95
CMTM3-201ENST00000361909 MIEF2Q96C03 454 aa20.96■□□□□ 0.95
CMTM3-201ENST00000361909 SGSM3Q96HU1 749 aa20.96■□□□□ 0.95
CMTM3-201ENST00000361909 NOX5Q96PH1 765 aa20.96■□□□□ 0.95
CMTM3-201ENST00000361909 MAPK8IP1Q9UQF2 711 aa20.96■□□□□ 0.95
CMTM3-201ENST00000361909 MOCS3O95396 460 aa20.95■□□□□ 0.94
CMTM3-201ENST00000361909 HSPA9P38646 679 aaKnown RBP20.95■□□□□ 0.94
CMTM3-201ENST00000361909 KCTD16Q68DU8 428 aa20.95■□□□□ 0.94
CMTM3-201ENST00000361909 C16orf86Q6ZW13 317 aa20.95■□□□□ 0.94
CMTM3-201ENST00000361909 PARP9Q8IXQ6 854 aa20.95■□□□□ 0.94
CMTM3-201ENST00000361909 P2RX5Q93086 422 aa20.95■□□□□ 0.94
CMTM3-201ENST00000361909 CYFIP2Q96F07 1278 aa20.95■□□□□ 0.94
CMTM3-201ENST00000361909 CCDC114Q96M63 670 aa20.95■□□□□ 0.94
CMTM3-201ENST00000361909 MKNK2Q9HBH9 465 aa20.95■□□□□ 0.94
CMTM3-201ENST00000361909 RBM12Q9NTZ6 932 aaKnown RBP20.95■□□□□ 0.94
CMTM3-201ENST00000361909 TCP11L1Q9NUJ3 509 aa20.95■□□□□ 0.94
CMTM3-201ENST00000361909 TSPY2A6NKD2 308 aa20.95■□□□□ 0.94
CMTM3-201ENST00000361909 KLRC4O43908 158 aa20.95■□□□□ 0.94
CMTM3-201ENST00000361909 PTGER2P43116 358 aa20.95■□□□□ 0.94
CMTM3-201ENST00000361909 SATB1Q01826 763 aa20.95■□□□□ 0.94
CMTM3-201ENST00000361909 IFIT1BQ5T764 474 aaKnown RBP20.95■□□□□ 0.94
CMTM3-201ENST00000361909 CDC42EP5Q6NZY7 148 aa20.95■□□□□ 0.94
CMTM3-201ENST00000361909 N4BP2L2Q92802 583 aaPredicted RBP20.95■□□□□ 0.94
CMTM3-201ENST00000361909 DUSP9Q99956 384 aaKnown RBP20.95■□□□□ 0.94
CMTM3-201ENST00000361909 NOC4LQ9BVI4 516 aaKnown RBP20.95■□□□□ 0.94
CMTM3-201ENST00000361909 EDEM3Q9BZQ6 932 aa20.95■□□□□ 0.94
CMTM3-201ENST00000361909 LUC7LQ9NQ29 371 aaKnown RBP20.95■□□□□ 0.94
CMTM3-201ENST00000361909 PLCB1Q9NQ66 1216 aa20.95■□□□□ 0.94
CMTM3-201ENST00000361909 SAP30BPQ9UHR5 308 aaKnown RBP20.95■□□□□ 0.94
CMTM3-201ENST00000361909 FER1L6Q2WGJ9 1857 aa20.94■□□□□ 0.94
CMTM3-201ENST00000361909 HEXIM1O94992 359 aaKnown RBP20.94■□□□□ 0.94
CMTM3-201ENST00000361909 CALRP27797 417 aaKnown RBP20.94■□□□□ 0.94
CMTM3-201ENST00000361909 HOXA7P31268 230 aaPredicted RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms