RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 DGKHQ86XP1 1220 aa15.17■□□□□ 0.02
COL6A1-201ENST00000361866 CPXCR1Q8N123 301 aa15.17■□□□□ 0.02
COL6A1-201ENST00000361866 KIFC2Q96AC6 838 aa15.17■□□□□ 0.02
COL6A1-201ENST00000361866 PLCB1Q9NQ66 1216 aa15.17■□□□□ 0.02
COL6A1-201ENST00000361866 THRAP3Q9Y2W1 955 aaKnown RBP15.17■□□□□ 0.02
COL6A1-201ENST00000361866 CEP83Q9Y592 693 aa15.17■□□□□ 0.02
COL6A1-201ENST00000361866 DIP2CQ9Y2E4 1556 aa15.17■□□□□ 0.02
COL6A1-201ENST00000361866 TDP2O95551 362 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 PHLDB2Q86SQ0 1253 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 AMACRQ9UHK6 382 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 HMGB1P1B2RPK0 211 aaPredicted RBP15.16■□□□□ 0.02
COL6A1-201ENST00000361866 AFPP02771 609 aaKnown RBP15.16■□□□□ 0.02
COL6A1-201ENST00000361866 PLA2G4BP0C869 781 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 SRGNP10124 158 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 SESN3P58005 492 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 LRRC63Q05C16 580 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 TRAPPC3LQ5T215 181 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 UNC13DQ70J99 1090 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 DDX42Q86XP3 938 aaKnown RBP eCLIP15.16■□□□□ 0.02
COL6A1-201ENST00000361866 SH3RF3Q8TEJ3 882 aaPredicted RBP15.16■□□□□ 0.02
COL6A1-201ENST00000361866 MROH1Q8NDA8 1641 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 A0A087X0B3 334 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 EIF4E1BA6NMX2 242 aaKnown RBP15.16■□□□□ 0.02
COL6A1-201ENST00000361866 ADCY8P40145 1251 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 TRIP13Q15645 432 aaPredicted RBP15.16■□□□□ 0.02
COL6A1-201ENST00000361866 C6orf163Q5TEZ5 329 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 USP37Q86T82 979 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 SPICE1Q8N0Z3 855 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 EHD4Q9H223 541 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 KLHL14Q9P2G3 628 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.16■□□□□ 0.02
COL6A1-201ENST00000361866 CAPN6Q9Y6Q1 641 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 ITIH6Q6UXX5 1313 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 GUCY2CP25092 1073 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 ATP5DP30049 168 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 BRINP3Q76B58 766 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 MSANTD4Q8NCY6 345 aa15.16■□□□□ 0.02
COL6A1-201ENST00000361866 NAP1L4Q99733 375 aaKnown RBP15.16■□□□□ 0.02
COL6A1-201ENST00000361866 PSMD14O00487 310 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 CSF1RP07333 972 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 NEDD9Q14511 834 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 NLRP14Q86W24 1093 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 ARL8AQ96BM9 186 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 KLHL29Q96CT2 875 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 TARSL2A2RTX5 802 aaKnown RBP15.15■□□□□ 0.02
COL6A1-201ENST00000361866 ERVV-1B6SEH8 477 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 MYO1FO00160 1098 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 EIF3HO15372 352 aaKnown RBP eCLIP15.15■□□□□ 0.022e-6■■■□□ 15.9
COL6A1-201ENST00000361866 SNAP25P60880 206 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 SARNPP82979 210 aaKnown RBP15.15■□□□□ 0.02
COL6A1-201ENST00000361866 FAM182BQ5T319 152 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 ZIM3Q96PE6 472 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 VPS37BQ9H9H4 285 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 MINPP1Q9UNW1 487 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 USP17L5A8MUK1 530 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 SMIM22K7EJ46 135 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 DAPK3O43293 454 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 THAP12O43422 761 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 PPP1R37O75864 691 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 CORO7P57737 925 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 KCNH2Q12809 1159 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 ODR4Q5SWX8 454 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 PCIF1Q9H4Z3 704 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 VIPAS39Q9H9C1 493 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 GGT7Q9UJ14 662 aa15.15■□□□□ 0.02
COL6A1-201ENST00000361866 GAS7O60861 476 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 MKRN4PQ13434 485 aaPredicted RBP15.14■□□□□ 0.01
COL6A1-201ENST00000361866 WDR78Q5VTH9 848 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 HHATQ5VTY9 493 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 CYP4F22Q6NT55 531 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 FAM217BQ9NTX9 383 aaPredicted RBP15.14■□□□□ 0.01
COL6A1-201ENST00000361866 ACSL3O95573 720 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 GAS8O95995 478 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 TMOD1P28289 359 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 CDK8P49336 464 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 FAM186BQ8IYM0 893 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 GDAP1Q8TB36 358 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 BHMT2Q9H2M3 363 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 METTL14Q9HCE5 456 aaKnown RBP15.14■□□□□ 0.01
COL6A1-201ENST00000361866 CCDC160A6NGH7 325 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 USP17L15C9J2P7 530 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 USP17L13C9JLJ4 530 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 USP17L11C9JVI0 530 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 USP17L18D6R9N7 530 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 USP17L22D6RA61 530 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 USP17L17D6RBQ6 530 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 USP17L19D6RCP7 530 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 USP17L20D6RJB6 530 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 USP17L24Q0WX57 530 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 TBX2Q13207 712 aaPredicted RBP15.14■□□□□ 0.01
COL6A1-201ENST00000361866 USP17L6PQ6QN14 398 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 FAM114A2Q9NRY5 505 aa15.14■□□□□ 0.01
COL6A1-201ENST00000361866 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.14■□□□□ 0.013e-6■■■□□ 18.4
COL6A1-201ENST00000361866 SRP68Q9UHB9 627 aaKnown RBP15.14■□□□□ 0.01
COL6A1-201ENST00000361866 CHUKO15111 745 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 CYP19A1P11511 503 aaPredicted RBP15.13■□□□□ 0.01
COL6A1-201ENST00000361866 SLC8A1P32418 973 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 PDE6BP35913 854 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 TROAPQ12815 778 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 PPP4R3AQ6IN85 833 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms