RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 CLDND1Q9NY35 253 aa7.09□□□□□ -1.28
CDC42SE2-201ENST00000360515 GREB1Q4ZG55 1949 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 USP34Q70CQ2 3546 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 MTMR3Q13615 1198 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 SYDE2Q5VT97 1194 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 PLCD3Q8N3E9 789 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 DBF4BQ8NFT6 615 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 DZANK1Q9NVP4 752 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 PCDHGC5Q9Y5F6 944 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 ZMYM2Q9UBW7 1377 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 H3BQ06 376 aaPredicted RBP7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 ENPP3O14638 875 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 SPTLC1O15269 473 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 ITGB1P05556 798 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 LIMK1P53667 647 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 SYCE2Q6PIF2 218 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 KBTBD3Q8NAB2 608 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 LINC01599Q8WXQ3 324 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 KIFC2Q96AC6 838 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 ADAM7Q9H2U9 754 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 CLIP2Q9UDT6 1046 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 FBXO4Q9UKT5 387 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 DUSP12Q9UNI6 340 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 TMEM232C9JQI7 657 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 SRGAP2BP0DMP2 458 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 TXNP10599 105 aaKnown RBP7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 TAF2Q6P1X5 1199 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 DTWD2Q8NBA8 298 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 HDAC7Q8WUI4 952 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 ZBED2Q9BTP6 218 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 PUS7LQ9H0K6 701 aaKnown RBP7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 SLC4A4Q9Y6R1 1079 aa7.08□□□□□ -1.28
CDC42SE2-201ENST00000360515 ZNF292O60281 2723 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 LINC01565O15544 149 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 SURF6O75683 361 aaKnown RBP7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 GNAT1P11488 350 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 PDE4DQ08499 809 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 RNF207Q6ZRF8 634 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 TSHZ1Q6ZSZ6 1077 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 MCF2L2Q86YR7 1114 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 SENP7Q9BQF6 1050 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 WNT16Q9UBV4 365 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 CCPG1Q9ULG6 757 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 FOXD2O60548 495 aaPredicted RBP7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 MTHFRP42898 656 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 ZNF543Q08ER8 600 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 SYTL5Q8TDW5 730 aaPredicted RBP7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 NSUN6Q8TEA1 469 aaKnown RBP7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 TRAIPQ9BWF2 469 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 EPC1Q9H2F5 836 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 SLC2A4RGQ9NR83 387 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 MYH15Q9Y2K3 1946 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 C17orf102A2RUQ5 167 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 NFIBO00712 420 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 TOP1P11387 765 aaKnown RBP7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 TGM1P22735 817 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 RPS6P62753 249 aaKnown RBP7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 DGLUCYQ7Z3D6 616 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 SLC22A17Q8WUG5 538 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 AFG1LQ8WV93 481 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 NEK1Q96PY6 1258 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 EPS15L1Q9UBC2 864 aa7.07□□□□□ -1.28
CDC42SE2-201ENST00000360515 LMNAP02545 664 aaKnown RBP7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 GPATCH4Q5T3I0 446 aaKnown RBP7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 FRMD5Q7Z6J6 570 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 VSIG10LQ86VR7 867 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 C7orf31Q8N865 590 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 CASP10Q92851 521 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 NGRNQ9NPE2 291 aaKnown RBP7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 C1orf112Q9NSG2 853 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 SALL3Q9BXA9 1300 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 CYP2D7A0A087X1C5 515 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 CHRNA1P02708 482 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 ADRB1P08588 477 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 TDGF1P13385 188 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 PDE4BQ07343 736 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 GIT2Q14161 759 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 LPIN1Q14693 890 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 STXBP2Q15833 593 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 CCDC178Q5BJE1 867 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 FBXO47Q5MNV8 452 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 ADGRD2Q7Z7M1 963 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 AACSQ86V21 672 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 NME8Q8N427 588 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 TMEM57Q8N5G2 664 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 PXMP2Q9NR77 195 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 MRPL42Q9Y6G3 142 aaKnown RBP7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 COL4A3Q01955 1670 aa7.06□□□□□ -1.28
CDC42SE2-201ENST00000360515 OPLAHO14841 1288 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 MYCNP04198 464 aaPredicted RBP7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 POLGP54098 1239 aaPredicted RBP7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 TPRNQ4KMQ1 711 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 ZKSCAN2Q63HK3 967 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 IFNL3Q8IZI9 196 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 CWH43Q9H720 699 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 SPATA31C2B4DYI2 1134 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 PDHBP11177 359 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 CTNNB1P35222 781 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 SLC1A4P43007 532 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 SARSP49591 514 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms