RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 NR2F2P24468 414 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 THEM5Q8N1Q8 247 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 KIAA1024Q9UPX6 916 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 CAPN7Q9Y6W3 813 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 hCG_1642624A0A1W2PR95 340 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 JAK2O60674 1132 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 BBOX1O75936 387 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 TRPV6Q9H1D0 765 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 M0R2C6 588 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 PYGBP11216 843 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 PRKG1Q13976 671 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 RC3H1Q5TC82 1133 aaKnown RBP10.44□□□□□ -0.74
CUX1-203ENST00000360264 MX2P20592 715 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 PGRMC1O00264 195 aaKnown RBP10.43□□□□□ -0.74
CUX1-203ENST00000360264 PTK2BQ14289 1009 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 RASIP1Q5U651 963 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 TRIM67Q6ZTA4 783 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 SLITRK6Q9H5Y7 841 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 ARID1BQ8NFD5 2236 aaPredicted RBP10.43□□□□□ -0.74
CUX1-203ENST00000360264 CLTAP09496 248 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 NOP14P78316 857 aaKnown RBP10.43□□□□□ -0.74
CUX1-203ENST00000360264 TNFAIP2Q03169 654 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 EHHADHQ08426 723 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 ALS2CLQ60I27 953 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 KMT5AQ9NQR1 393 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 PACSIN2Q9UNF0 486 aaPredicted RBP10.43□□□□□ -0.74
CUX1-203ENST00000360264 BCAMP50895 628 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 MRFAP1L1Q96HT8 127 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 ASPSCR1Q9BZE9 553 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 GOLGA8MH3BSY2 632 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 EIF4A1P60842 406 aaKnown RBP10.43□□□□□ -0.74
CUX1-203ENST00000360264 SLMAPQ14BN4 828 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 URGCPQ8TCY9 931 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 PI4KBQ9UBF8 816 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 PTPRZ1P23471 2315 aaPredicted RBP10.43□□□□□ -0.74
CUX1-203ENST00000360264 VPS41P49754 854 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 PODNQ7Z5L7 613 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 PCGF5Q86SE9 256 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 MCUQ8NE86 351 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 POLR3CQ9BUI4 534 aaPredicted RBP10.43□□□□□ -0.74
CUX1-203ENST00000360264 POLA2Q14181 598 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 SGO2Q562F6 1265 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 TRIM68Q6AZZ1 485 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 RAB42Q8N4Z0 105 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 BCS1LQ9Y276 419 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 DIS3Q9Y2L1 958 aaKnown RBP10.43□□□□□ -0.74
CUX1-203ENST00000360264 ZSCAN26Q16670 478 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 SYDE2Q5VT97 1194 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 NUDT18Q6ZVK8 323 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 TRMT44Q8IYL2 757 aaKnown RBP10.43□□□□□ -0.74
CUX1-203ENST00000360264 FAM135BQ49AJ0 1406 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 IL6STP40189 918 aaPredicted RBP10.43□□□□□ -0.74
CUX1-203ENST00000360264 DCAF4Q8WV16 495 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 CENPKQ9BS16 269 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 GPR108Q9NPR9 543 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 DNMT1P26358 1616 aaKnown RBP10.43□□□□□ -0.74
CUX1-203ENST00000360264 LRRC63Q05C16 580 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 RDH13Q8NBN7 331 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 THAP9Q9H5L6 903 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 SERPINB13Q9UIV8 391 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 SLC4A1P02730 911 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 GDAP1Q8TB36 358 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 PI4K2BQ8TCG2 481 aa10.43□□□□□ -0.74
CUX1-203ENST00000360264 TOPORSQ9NS56 1045 aaPredicted RBP10.43□□□□□ -0.74
CUX1-203ENST00000360264 RASGRF2O14827 1237 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 TJP3O95049 919 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 ZSWIM6Q9HCJ5 1215 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 PTPN22Q9Y2R2 807 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 CHRNDQ07001 517 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 CDV3Q9UKY7 258 aaKnown RBP10.42□□□□□ -0.74
CUX1-203ENST00000360264 KIAA1755Q5JYT7 1200 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 ZNF653Q96CK0 615 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 ATP8B1O43520 1251 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 EIF3BP55884 814 aaKnown RBP10.42□□□□□ -0.74
CUX1-203ENST00000360264 CRLF3Q8IUI8 442 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 SNX19Q92543 992 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 RLBP1P12271 317 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 WASHC5Q12768 1159 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 PAWRQ96IZ0 340 aaKnown RBP10.42□□□□□ -0.74
CUX1-203ENST00000360264 KRT82Q9NSB4 513 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 FARP1Q9Y4F1 1045 aaPredicted RBP10.42□□□□□ -0.74
CUX1-203ENST00000360264 ATP10AO60312 1499 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 BUB1O43683 1085 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 CPA1P15085 419 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 PARVGQ9HBI0 331 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 ASNSD1Q9NWL6 643 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 KCNA4P22459 653 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 ME3Q16798 604 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 FAM186BQ8IYM0 893 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 ATP7AQ04656 1500 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 IKBKBO14920 756 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 GLE1Q53GS7 698 aaKnown RBP10.42□□□□□ -0.74
CUX1-203ENST00000360264 FASTKD5Q7L8L6 764 aaKnown RBP10.42□□□□□ -0.74
CUX1-203ENST00000360264 NEUROG2Q9H2A3 272 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 THRAP3Q9Y2W1 955 aaKnown RBP10.42□□□□□ -0.74
CUX1-203ENST00000360264 MLH3Q9UHC1 1453 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 GPKOWQ92917 476 aaPredicted RBP eCLIP10.42□□□□□ -0.747e-6■□□□□ 10
CUX1-203ENST00000360264 FSD1LQ9BXM9 530 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 SOX5P35711 763 aa10.42□□□□□ -0.74
CUX1-203ENST00000360264 TADA2BQ86TJ2 420 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms