RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 YWHAEP62258 255 aaKnown RBP14.91□□□□□ -0.02
VCP-201ENST00000358901 LRRC8CQ8TDW0 803 aa14.91□□□□□ -0.02
VCP-201ENST00000358901 DBNDD1Q9H9R9 158 aa14.91□□□□□ -0.02
VCP-201ENST00000358901 MLXIPQ9HAP2 919 aa14.91□□□□□ -0.02
VCP-201ENST00000358901 PARVGQ9HBI0 331 aa14.91□□□□□ -0.02
VCP-201ENST00000358901 UBE2TQ9NPD8 197 aaPredicted RBP14.91□□□□□ -0.02
VCP-201ENST00000358901 SLC8A1P32418 973 aa14.9□□□□□ -0.02
VCP-201ENST00000358901 BPIFB4P59827 614 aa14.9□□□□□ -0.02
VCP-201ENST00000358901 TXNRD1Q16881 649 aa14.9□□□□□ -0.02
VCP-201ENST00000358901 BBOF1Q8ND07 529 aa14.9□□□□□ -0.02
VCP-201ENST00000358901 MORC2Q9Y6X9 1032 aaPredicted RBP14.9□□□□□ -0.02
VCP-201ENST00000358901 ZCCHC11Q5TAX3 1644 aaKnown RBP14.9□□□□□ -0.02
VCP-201ENST00000358901 SFI1A8K8P3 1242 aa14.9□□□□□ -0.02
VCP-201ENST00000358901 TMEM191BP0C7N4 346 aa14.9□□□□□ -0.02
VCP-201ENST00000358901 DDIT3P35638 169 aa14.9□□□□□ -0.02
VCP-201ENST00000358901 POLGP54098 1239 aaPredicted RBP14.9□□□□□ -0.02
VCP-201ENST00000358901 YARSP54577 528 aaKnown RBP14.9□□□□□ -0.02
VCP-201ENST00000358901 SNCBQ16143 134 aa14.9□□□□□ -0.02
VCP-201ENST00000358901 VCXQ9H320 206 aa14.9□□□□□ -0.02
VCP-201ENST00000358901 LAMC1P11047 1609 aa14.9□□□□□ -0.02
VCP-201ENST00000358901 LRRC53A6NM62 1247 aa14.9□□□□□ -0.02
VCP-201ENST00000358901 APBA3O96018 575 aa14.9□□□□□ -0.02
VCP-201ENST00000358901 POLR2BP30876 1174 aaKnown RBP14.9□□□□□ -0.02
VCP-201ENST00000358901 MXI1P50539 228 aa14.9□□□□□ -0.02
VCP-201ENST00000358901 SESN3P58005 492 aa14.9□□□□□ -0.02
VCP-201ENST00000358901 MRPS9P82933 396 aaKnown RBP14.9□□□□□ -0.02
VCP-201ENST00000358901 MUM1Q2TAK8 710 aa14.9□□□□□ -0.02
VCP-201ENST00000358901 ZBTB8OSQ8IWT0 167 aa14.9□□□□□ -0.02
VCP-201ENST00000358901 NEK9Q8TD19 979 aa14.9□□□□□ -0.02
VCP-201ENST00000358901 SH3RF3Q8TEJ3 882 aaPredicted RBP14.9□□□□□ -0.02
VCP-201ENST00000358901 ZNF609O15014 1411 aa14.9□□□□□ -0.02
VCP-201ENST00000358901 TADA3O75528 432 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 PALMO75781 387 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 STAM2O75886 525 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 KRT81Q14533 505 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 SEPT14Q6ZU15 432 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 MTA3Q9BTC8 594 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 POLD4Q9HCU8 107 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 ODF2LQ9ULJ1 636 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 MINPP1Q9UNW1 487 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 PNMA6FA0A0J9YX94 578 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 ANO9A1A5B4 782 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 ARHGAP42A6NI28 874 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 H0YCG3 227 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 ECEL1O95672 775 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 HOXA13P31271 388 aaPredicted RBP14.89□□□□□ -0.03
VCP-201ENST00000358901 RAB3IPQ96QF0 476 aaPredicted RBP14.89□□□□□ -0.03
VCP-201ENST00000358901 ANO3Q9BYT9 981 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 SH3GLB2Q9NR46 395 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 P4HA1P13674 534 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 PPP2R5CQ13362 524 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 TNFAIP1Q13829 316 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 E2F4Q16254 413 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 C10orf76Q5T2E6 689 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 MMS19Q96T76 1030 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 TBK1Q9UHD2 729 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 UNC13BO14795 1591 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 FGGP02679 453 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 CA8P35219 290 aa14.89□□□□□ -0.03
VCP-201ENST00000358901 ADGRL3Q9HAR2 1447 aa14.88□□□□□ -0.03
VCP-201ENST00000358901 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.88□□□□□ -0.03
VCP-201ENST00000358901 ESYT3A0FGR9 886 aa14.88□□□□□ -0.03
VCP-201ENST00000358901 RPSAP08865 295 aaKnown RBP14.88□□□□□ -0.03
VCP-201ENST00000358901 PIK3CAP42336 1068 aa14.88□□□□□ -0.03
VCP-201ENST00000358901 RCAN1P53805 252 aa14.88□□□□□ -0.03
VCP-201ENST00000358901 IL9RQ01113 521 aa14.88□□□□□ -0.03
VCP-201ENST00000358901 CDC37Q16543 378 aaPredicted RBP14.88□□□□□ -0.03
VCP-201ENST00000358901 ANKRD35Q8N283 1001 aa14.88□□□□□ -0.03
VCP-201ENST00000358901 CELF1Q92879 486 aaKnown RBP14.88□□□□□ -0.03
VCP-201ENST00000358901 KLHL29Q96CT2 875 aa14.88□□□□□ -0.03
VCP-201ENST00000358901 HOOK2Q96ED9 719 aa14.88□□□□□ -0.03
VCP-201ENST00000358901 ACCSQ96QU6 501 aa14.88□□□□□ -0.03
VCP-201ENST00000358901 PAGR1Q9BTK6 254 aa14.88□□□□□ -0.03
VCP-201ENST00000358901 PCDHB4Q9Y5E5 795 aa14.88□□□□□ -0.03
VCP-201ENST00000358901 MRFAP1Q9Y605 127 aa14.88□□□□□ -0.03
VCP-201ENST00000358901 YWHAGP61981 247 aaKnown RBP eCLIP14.88□□□□□ -0.03
VCP-201ENST00000358901 TTBK2Q6IQ55 1244 aa14.88□□□□□ -0.03
VCP-201ENST00000358901 PHLDB2Q86SQ0 1253 aa14.88□□□□□ -0.03
VCP-201ENST00000358901 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.88□□□□□ -0.034e-11■■□□□ 13
VCP-201ENST00000358901 CPSF2Q9P2I0 782 aaKnown RBP14.88□□□□□ -0.03
VCP-201ENST00000358901 USP17L5A8MUK1 530 aa14.88□□□□□ -0.03
VCP-201ENST00000358901 RASGRF2O14827 1237 aa14.88□□□□□ -0.03
VCP-201ENST00000358901 PPEF1O14829 653 aaPredicted RBP14.88□□□□□ -0.03
VCP-201ENST00000358901 TNNC2P02585 160 aa14.88□□□□□ -0.03
VCP-201ENST00000358901 HSPA6P17066 643 aa14.88□□□□□ -0.03
VCP-201ENST00000358901 GGCXP38435 758 aa14.88□□□□□ -0.03
VCP-201ENST00000358901 HIBCHQ6NVY1 386 aaPredicted RBP14.88□□□□□ -0.03
VCP-201ENST00000358901 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.88□□□□□ -0.03
VCP-201ENST00000358901 FBXO2Q9UK22 296 aaPredicted RBP14.88□□□□□ -0.03
VCP-201ENST00000358901 MAD1L1Q9Y6D9 718 aa14.88□□□□□ -0.03
VCP-201ENST00000358901 ERCC6L2Q5T890 1561 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 FAM205CA6NFA0 338 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 DR1Q01658 176 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 GFPT1Q06210 699 aaPredicted RBP14.87□□□□□ -0.03
VCP-201ENST00000358901 CTTNQ14247 550 aaKnown RBP14.87□□□□□ -0.03
VCP-201ENST00000358901 PHLDB3Q6NSJ2 640 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 USP49Q70CQ1 688 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 NLGN1Q8N2Q7 840 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 CFAP61Q8NHU2 1237 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 CCT6BQ92526 530 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms