RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 ZCWPW2Q504Y3 356 aa26.06■■□□□ 1.76
NPAS3-203ENST00000357798 USP17L1Q7RTZ2 530 aa26.06■■□□□ 1.76
NPAS3-203ENST00000357798 TBCKQ8TEA7 893 aa26.06■■□□□ 1.76
NPAS3-203ENST00000357798 BHMG1C9JSJ3 638 aaPredicted RBP26.05■■□□□ 1.76
NPAS3-203ENST00000357798 KLRF2D3W0D1 207 aa26.05■■□□□ 1.76
NPAS3-203ENST00000357798 H0YGN5 161 aa26.05■■□□□ 1.76
NPAS3-203ENST00000357798 TSPY3P0CV98 308 aa26.05■■□□□ 1.76
NPAS3-203ENST00000357798 TSPY8P0CW00 308 aa26.05■■□□□ 1.76
NPAS3-203ENST00000357798 TXKP42681 527 aa26.05■■□□□ 1.76
NPAS3-203ENST00000357798 ERVK-9P63128 1117 aa26.05■■□□□ 1.76
NPAS3-203ENST00000357798 FKBP3Q00688 224 aaKnown RBP26.05■■□□□ 1.76
NPAS3-203ENST00000357798 TMEM47Q9BQJ4 181 aa26.05■■□□□ 1.76
NPAS3-203ENST00000357798 MKNK2Q9HBH9 465 aa26.05■■□□□ 1.76
NPAS3-203ENST00000357798 NFS1Q9Y697 457 aa26.05■■□□□ 1.76
NPAS3-203ENST00000357798 ECHS1P30084 290 aa26.05■■□□□ 1.76
NPAS3-203ENST00000357798 DYNLL2Q96FJ2 89 aa26.05■■□□□ 1.76
NPAS3-203ENST00000357798 SLC12A6Q9UHW9 1150 aa26.05■■□□□ 1.76
NPAS3-203ENST00000357798 GMNCA6NCL1 334 aa26.04■■□□□ 1.76
NPAS3-203ENST00000357798 ZPR1O75312 459 aa26.04■■□□□ 1.76
NPAS3-203ENST00000357798 KIAA0753Q2KHM9 967 aa26.04■■□□□ 1.76
NPAS3-203ENST00000357798 TMEM266Q2M3C6 531 aa26.04■■□□□ 1.76
NPAS3-203ENST00000357798 SOGA3Q5TF21 947 aa26.04■■□□□ 1.76
NPAS3-203ENST00000357798 CCDC121Q6ZUS5 278 aa26.04■■□□□ 1.76
NPAS3-203ENST00000357798 KLHL7Q8IXQ5 586 aa26.04■■□□□ 1.76
NPAS3-203ENST00000357798 MYOCDQ8IZQ8 938 aa26.04■■□□□ 1.76
NPAS3-203ENST00000357798 PBKQ96KB5 322 aa26.04■■□□□ 1.76
NPAS3-203ENST00000357798 JPH2Q9BR39 696 aaPredicted RBP26.04■■□□□ 1.76
NPAS3-203ENST00000357798 PACSIN2Q9UNF0 486 aaPredicted RBP26.04■■□□□ 1.76
NPAS3-203ENST00000357798 DOT1LQ8TEK3 1739 aa26.04■■□□□ 1.76
NPAS3-203ENST00000357798 MYH4Q9Y623 1939 aa26.04■■□□□ 1.76
NPAS3-203ENST00000357798 CCDC172P0C7W6 258 aa26.04■■□□□ 1.76
NPAS3-203ENST00000357798 HPDP32754 393 aaPredicted RBP26.04■■□□□ 1.76
NPAS3-203ENST00000357798 POLR2FP61218 127 aaKnown RBP26.04■■□□□ 1.76
NPAS3-203ENST00000357798 HLTFQ14527 1009 aaKnown RBP eCLIP26.04■■□□□ 1.76
NPAS3-203ENST00000357798 RUFY4Q6ZNE9 571 aa26.04■■□□□ 1.76
NPAS3-203ENST00000357798 ZKSCAN4Q969J2 545 aaPredicted RBP26.04■■□□□ 1.76
NPAS3-203ENST00000357798 CEP63Q96MT8 703 aa26.04■■□□□ 1.76
NPAS3-203ENST00000357798 AIPL1Q9NZN9 384 aa26.04■■□□□ 1.76
NPAS3-203ENST00000357798 RPS6KA1Q15418 735 aa26.03■■□□□ 1.76
NPAS3-203ENST00000357798 CALCRLQ16602 461 aa26.03■■□□□ 1.76
NPAS3-203ENST00000357798 SCFD2Q8WU76 684 aa26.03■■□□□ 1.76
NPAS3-203ENST00000357798 A0A087X0T9 212 aa26.03■■□□□ 1.76
NPAS3-203ENST00000357798 FAM228BP0C875 321 aa26.03■■□□□ 1.76
NPAS3-203ENST00000357798 RDXP35241 583 aaKnown RBP26.03■■□□□ 1.76
NPAS3-203ENST00000357798 SLC4A8Q2Y0W8 1093 aa26.03■■□□□ 1.76
NPAS3-203ENST00000357798 AGBL2Q5U5Z8 902 aa26.03■■□□□ 1.76
NPAS3-203ENST00000357798 DDX12PQ92771 950 aa26.03■■□□□ 1.76
NPAS3-203ENST00000357798 CALR3Q96L12 384 aaKnown RBP26.03■■□□□ 1.76
NPAS3-203ENST00000357798 SLC40A1Q9NP59 571 aa26.03■■□□□ 1.76
NPAS3-203ENST00000357798 PPANQ9NQ55 473 aaKnown RBP26.03■■□□□ 1.76
NPAS3-203ENST00000357798 GOLGA6L7A0A1B0GV03 622 aa26.02■■□□□ 1.76
NPAS3-203ENST00000357798 GNA14O95837 355 aa26.02■■□□□ 1.76
NPAS3-203ENST00000357798 UAP1Q16222 522 aaPredicted RBP26.02■■□□□ 1.76
NPAS3-203ENST00000357798 C10orf76Q5T2E6 689 aa26.02■■□□□ 1.76
NPAS3-203ENST00000357798 RAB34Q9BZG1 259 aa26.02■■□□□ 1.76
NPAS3-203ENST00000357798 ESYT2A0FGR8 921 aa26.02■■□□□ 1.76
NPAS3-203ENST00000357798 TRAPPC3O43617 180 aa26.02■■□□□ 1.76
NPAS3-203ENST00000357798 HIBADHP31937 336 aaKnown RBP26.02■■□□□ 1.76
NPAS3-203ENST00000357798 SEPT2Q15019 361 aa26.02■■□□□ 1.76
NPAS3-203ENST00000357798 TMEM119Q4V9L6 283 aa26.02■■□□□ 1.76
NPAS3-203ENST00000357798 C3orf67Q6ZVT6 689 aa26.02■■□□□ 1.76
NPAS3-203ENST00000357798 ACTRT1Q8TDG2 376 aa26.02■■□□□ 1.76
NPAS3-203ENST00000357798 MTMR7Q9Y216 660 aa26.02■■□□□ 1.76
NPAS3-203ENST00000357798 GOLGA8HP0CJ92 632 aa26.01■■□□□ 1.76
NPAS3-203ENST00000357798 ERCC3P19447 782 aa26.01■■□□□ 1.76
NPAS3-203ENST00000357798 KLRK1P26718 216 aa26.01■■□□□ 1.76
NPAS3-203ENST00000357798 USP11P51784 963 aa26.01■■□□□ 1.76
NPAS3-203ENST00000357798 KLHL30Q0D2K2 578 aa26.01■■□□□ 1.76
NPAS3-203ENST00000357798 RAPGEF1Q13905 1077 aa26.01■■□□□ 1.76
NPAS3-203ENST00000357798 LRRC41Q15345 812 aa26.01■■□□□ 1.76
NPAS3-203ENST00000357798 ASIC2Q16515 512 aa26.01■■□□□ 1.76
NPAS3-203ENST00000357798 ZNF444Q8N0Y2 327 aaPredicted RBP26.01■■□□□ 1.76
NPAS3-203ENST00000357798 REXO1Q8N1G1 1221 aaKnown RBP26.01■■□□□ 1.76
NPAS3-203ENST00000357798 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.01■■□□□ 1.76
NPAS3-203ENST00000357798 KIF4AO95239 1232 aa26.01■■□□□ 1.75
NPAS3-203ENST00000357798 PAEPP09466 180 aa26.01■■□□□ 1.75
NPAS3-203ENST00000357798 MARSP56192 900 aaKnown RBP26.01■■□□□ 1.75
NPAS3-203ENST00000357798 RNASE9P60153 205 aaKnown RBP26.01■■□□□ 1.75
NPAS3-203ENST00000357798 ZNF844Q08AG5 666 aa26.01■■□□□ 1.75
NPAS3-203ENST00000357798 MTMR3Q13615 1198 aa26.01■■□□□ 1.75
NPAS3-203ENST00000357798 PDIA5Q14554 519 aa26.01■■□□□ 1.75
NPAS3-203ENST00000357798 NAV1Q8NEY1 1877 aa26.01■■□□□ 1.75
NPAS3-203ENST00000357798 PACSIN1Q9BY11 444 aa26.01■■□□□ 1.75
NPAS3-203ENST00000357798 CD248Q9HCU0 757 aa26.01■■□□□ 1.75
NPAS3-203ENST00000357798 KIF13BQ9NQT8 1826 aa26.01■■□□□ 1.75
NPAS3-203ENST00000357798 C5orf60A6NFR6 353 aa26.01■■□□□ 1.75
NPAS3-203ENST00000357798 TRAF5O00463 557 aa26.01■■□□□ 1.75
NPAS3-203ENST00000357798 PREPLQ4J6C6 727 aaPredicted RBP26.01■■□□□ 1.75
NPAS3-203ENST00000357798 GLIS3Q8NEA6 775 aa26.01■■□□□ 1.75
NPAS3-203ENST00000357798 DDX20Q9UHI6 824 aaKnown RBP26.01■■□□□ 1.75
NPAS3-203ENST00000357798 STX8Q9UNK0 236 aa26.01■■□□□ 1.75
NPAS3-203ENST00000357798 KCNK3O14649 394 aa26■■□□□ 1.75
NPAS3-203ENST00000357798 SMARCA1P28370 1054 aa26■■□□□ 1.75
NPAS3-203ENST00000357798 IFI16Q16666 785 aaKnown RBP26■■□□□ 1.75
NPAS3-203ENST00000357798 TRIM59Q8IWR1 403 aa26■■□□□ 1.75
NPAS3-203ENST00000357798 CENPHQ9H3R5 247 aa26■■□□□ 1.75
NPAS3-203ENST00000357798 ZNF652Q9Y2D9 606 aa26■■□□□ 1.75
NPAS3-203ENST00000357798 COASYQ13057 564 aa26■■□□□ 1.75
NPAS3-203ENST00000357798 ERFEQ4G0M1 354 aa26■■□□□ 1.75
NPAS3-203ENST00000357798 SPTY2D1Q68D10 685 aaPredicted RBP26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms