RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 HAUS3Q68CZ6 603 aa17.55■□□□□ 0.4
PHTF1-201ENST00000357783 IQCDQ96DY2 449 aa17.55■□□□□ 0.4
PHTF1-201ENST00000357783 PCDHA2Q9Y5H9 948 aa17.55■□□□□ 0.4
PHTF1-201ENST00000357783 COL4A3BPQ9Y5P4 624 aa17.55■□□□□ 0.4
PHTF1-201ENST00000357783 DUSP10Q9Y6W6 482 aa17.55■□□□□ 0.4
PHTF1-201ENST00000357783 CLRN2A0PK11 232 aa17.55■□□□□ 0.4
PHTF1-201ENST00000357783 C21orf2O43822 256 aa17.55■□□□□ 0.4
PHTF1-201ENST00000357783 RHOXF2BP0C7M4 288 aa17.55■□□□□ 0.4
PHTF1-201ENST00000357783 SPIRE1Q08AE8 756 aa17.55■□□□□ 0.4
PHTF1-201ENST00000357783 RRAGAQ7L523 313 aa17.55■□□□□ 0.4
PHTF1-201ENST00000357783 CATSPER3Q86XQ3 398 aa17.55■□□□□ 0.4
PHTF1-201ENST00000357783 SMCR8Q8TEV9 937 aaPredicted RBP17.55■□□□□ 0.4
PHTF1-201ENST00000357783 LENG9Q96B70 501 aa17.55■□□□□ 0.4
PHTF1-201ENST00000357783 RHOXF2Q9BQY4 288 aa17.55■□□□□ 0.4
PHTF1-201ENST00000357783 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.55■□□□□ 0.4
PHTF1-201ENST00000357783 ARHGAP20Q9P2F6 1191 aa17.55■□□□□ 0.4
PHTF1-201ENST00000357783 PLAGL2Q9UPG8 496 aa17.55■□□□□ 0.4
PHTF1-201ENST00000357783 MACROD2A1Z1Q3 448 aa17.54■□□□□ 0.4
PHTF1-201ENST00000357783 ZNF263O14978 683 aa17.54■□□□□ 0.4
PHTF1-201ENST00000357783 ECE1P42892 770 aa17.54■□□□□ 0.4
PHTF1-201ENST00000357783 SLC12A3P55017 1021 aa17.54■□□□□ 0.4
PHTF1-201ENST00000357783 PSMC6P62333 389 aa17.54■□□□□ 0.4
PHTF1-201ENST00000357783 SPA17Q15506 151 aa17.54■□□□□ 0.4
PHTF1-201ENST00000357783 ARSHQ5FYA8 562 aa17.54■□□□□ 0.4
PHTF1-201ENST00000357783 TRAPPC11Q7Z392 1133 aa17.54■□□□□ 0.4
PHTF1-201ENST00000357783 PNKPQ96T60 521 aa17.54■□□□□ 0.4
PHTF1-201ENST00000357783 PRR12Q9ULL5 1215 aa17.54■□□□□ 0.4
PHTF1-201ENST00000357783 LRRC53A6NM62 1247 aa17.54■□□□□ 0.4
PHTF1-201ENST00000357783 OPLAHO14841 1288 aa17.54■□□□□ 0.4
PHTF1-201ENST00000357783 SREBF1P36956 1147 aa17.54■□□□□ 0.4
PHTF1-201ENST00000357783 PABPC4Q13310 644 aaKnown RBP eCLIP17.54■□□□□ 0.4
PHTF1-201ENST00000357783 ZNF662Q6ZS27 426 aa17.54■□□□□ 0.4
PHTF1-201ENST00000357783 EHBP1Q8NDI1 1231 aa17.54■□□□□ 0.4
PHTF1-201ENST00000357783 SCFD1Q8WVM8 642 aa17.54■□□□□ 0.4
PHTF1-201ENST00000357783 HNRNPH3P31942 346 aaKnown RBP17.53■□□□□ 0.4
PHTF1-201ENST00000357783 Q4G0T1 1027 aa17.53■□□□□ 0.4
PHTF1-201ENST00000357783 ZNF772Q68DY9 489 aaPredicted RBP17.53■□□□□ 0.4
PHTF1-201ENST00000357783 NEK11Q8NG66 645 aa17.53■□□□□ 0.4
PHTF1-201ENST00000357783 CYP2W1Q8TAV3 490 aa17.53■□□□□ 0.4
PHTF1-201ENST00000357783 CCDC151A5D8V7 595 aa17.53■□□□□ 0.4
PHTF1-201ENST00000357783 SRGAP2O75044 1071 aa17.53■□□□□ 0.4
PHTF1-201ENST00000357783 FOSP01100 380 aaPredicted RBP17.53■□□□□ 0.4
PHTF1-201ENST00000357783 EIF4A3P38919 411 aaKnown RBP17.53■□□□□ 0.4
PHTF1-201ENST00000357783 VAV2P52735 878 aa17.53■□□□□ 0.4
PHTF1-201ENST00000357783 FOXR2Q6PJQ5 311 aa17.53■□□□□ 0.4
PHTF1-201ENST00000357783 NOA1Q8NC60 698 aaKnown RBP17.53■□□□□ 0.4
PHTF1-201ENST00000357783 ERMNQ8TAM6 284 aa17.53■□□□□ 0.4
PHTF1-201ENST00000357783 DEF6Q9H4E7 631 aa17.53■□□□□ 0.4
PHTF1-201ENST00000357783 TMOD2Q9NZR1 351 aa17.53■□□□□ 0.4
PHTF1-201ENST00000357783 CYP4A11Q02928 519 aa17.52■□□□□ 0.4
PHTF1-201ENST00000357783 KIF5AQ12840 1032 aa17.52■□□□□ 0.4
PHTF1-201ENST00000357783 BRD3Q15059 726 aa17.52■□□□□ 0.4
PHTF1-201ENST00000357783 KIAA1755Q5JYT7 1200 aa17.52■□□□□ 0.4
PHTF1-201ENST00000357783 MCTP2Q6DN12 878 aa17.52■□□□□ 0.4
PHTF1-201ENST00000357783 CACNA2D4Q7Z3S7 1137 aa17.52■□□□□ 0.4
PHTF1-201ENST00000357783 ACER1Q8TDN7 264 aa17.52■□□□□ 0.4
PHTF1-201ENST00000357783 BAP1Q92560 729 aa17.52■□□□□ 0.4
PHTF1-201ENST00000357783 EMILIN3Q9NT22 766 aa17.52■□□□□ 0.4
PHTF1-201ENST00000357783 TNS1Q9HBL0 1735 aaKnown RBP17.52■□□□□ 0.4
PHTF1-201ENST00000357783 TBX3O15119 743 aa17.52■□□□□ 0.39
PHTF1-201ENST00000357783 MSH4O15457 936 aa17.52■□□□□ 0.39
PHTF1-201ENST00000357783 SLC26A4O43511 780 aa17.52■□□□□ 0.39
PHTF1-201ENST00000357783 SPATA31C1P0DKV0 1188 aa17.52■□□□□ 0.39
PHTF1-201ENST00000357783 ZNF76P36508 570 aa17.52■□□□□ 0.39
PHTF1-201ENST00000357783 MMP14P50281 582 aa17.52■□□□□ 0.39
PHTF1-201ENST00000357783 KIF11P52732 1056 aa17.52■□□□□ 0.39
PHTF1-201ENST00000357783 KCNMA1Q12791 1236 aa17.52■□□□□ 0.39
PHTF1-201ENST00000357783 LONRF2Q1L5Z9 754 aa17.52■□□□□ 0.39
PHTF1-201ENST00000357783 BTNL9Q6UXG8 535 aa17.52■□□□□ 0.39
PHTF1-201ENST00000357783 MSANTD4Q8NCY6 345 aa17.52■□□□□ 0.39
PHTF1-201ENST00000357783 SUPT20HQ8NEM7 779 aa17.52■□□□□ 0.39
PHTF1-201ENST00000357783 IFIH1Q9BYX4 1025 aaKnown RBP17.52■□□□□ 0.39
PHTF1-201ENST00000357783 SAR1BQ9Y6B6 198 aa17.52■□□□□ 0.39
PHTF1-201ENST00000357783 POTEB2H3BUK9 544 aa17.51■□□□□ 0.39
PHTF1-201ENST00000357783 RAD17O75943 681 aa17.51■□□□□ 0.39
PHTF1-201ENST00000357783 CAPZA3Q96KX2 299 aa17.51■□□□□ 0.39
PHTF1-201ENST00000357783 CEP63Q96MT8 703 aa17.51■□□□□ 0.39
PHTF1-201ENST00000357783 KCTD10Q9H3F6 313 aa17.51■□□□□ 0.39
PHTF1-201ENST00000357783 DNM3Q9UQ16 869 aa17.51■□□□□ 0.39
PHTF1-201ENST00000357783 ATP8B1O43520 1251 aa17.51■□□□□ 0.39
PHTF1-201ENST00000357783 AKR1B10O60218 316 aa17.51■□□□□ 0.39
PHTF1-201ENST00000357783 RPA1P27694 616 aa17.51■□□□□ 0.39
PHTF1-201ENST00000357783 CASP5P51878 434 aa17.51■□□□□ 0.39
PHTF1-201ENST00000357783 STAT2P52630 851 aa17.51■□□□□ 0.39
PHTF1-201ENST00000357783 SECISBP2LQ93073 1101 aaKnown RBP17.51■□□□□ 0.39
PHTF1-201ENST00000357783 CRACR2AQ9BSW2 395 aa17.51■□□□□ 0.39
PHTF1-201ENST00000357783 ARHGEF10LQ9HCE6 1279 aa17.51■□□□□ 0.39
PHTF1-201ENST00000357783 NLRC4Q9NPP4 1024 aa17.51■□□□□ 0.39
PHTF1-201ENST00000357783 HERC5Q9UII4 1024 aaKnown RBP17.51■□□□□ 0.39
PHTF1-201ENST00000357783 PCDHA13Q9Y5I0 950 aa17.51■□□□□ 0.39
PHTF1-201ENST00000357783 COL2A1P02458 1487 aaPredicted RBP17.5■□□□□ 0.39
PHTF1-201ENST00000357783 FRMD3A2A2Y4 597 aa17.5■□□□□ 0.39
PHTF1-201ENST00000357783 SPDYE2BA6NHP3 402 aa17.5■□□□□ 0.39
PHTF1-201ENST00000357783 SPDYE6P0CI01 402 aa17.5■□□□□ 0.39
PHTF1-201ENST00000357783 FAM83BQ5T0W9 1011 aa17.5■□□□□ 0.39
PHTF1-201ENST00000357783 PAPD7Q5XG87 772 aaKnown RBP17.5■□□□□ 0.39
PHTF1-201ENST00000357783 PDXDC1Q6P996 788 aa17.5■□□□□ 0.39
PHTF1-201ENST00000357783 SAMD1Q6SPF0 538 aaPredicted RBP17.5■□□□□ 0.39
PHTF1-201ENST00000357783 FAM20AQ96MK3 541 aa17.5■□□□□ 0.39
PHTF1-201ENST00000357783 PURBQ96QR8 312 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms