RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 ZIM3Q96PE6 472 aa19.5■□□□□ 0.71
RTN4-204ENST00000357732 FAM169AQ9Y6X4 670 aa19.5■□□□□ 0.71
RTN4-204ENST00000357732 SLC37A4O43826 429 aa19.5■□□□□ 0.71
RTN4-204ENST00000357732 NOL4O94818 638 aa19.5■□□□□ 0.71
RTN4-204ENST00000357732 ANXA13P27216 316 aa19.5■□□□□ 0.71
RTN4-204ENST00000357732 NAP1L1P55209 391 aaKnown RBP19.5■□□□□ 0.71
RTN4-204ENST00000357732 TNNC1P63316 161 aa19.5■□□□□ 0.71
RTN4-204ENST00000357732 FAM26FQ5R3K3 315 aa19.5■□□□□ 0.71
RTN4-204ENST00000357732 TRIM59Q8IWR1 403 aa19.5■□□□□ 0.71
RTN4-204ENST00000357732 CEP95Q96GE4 821 aa19.5■□□□□ 0.71
RTN4-204ENST00000357732 NCK2O43639 380 aa19.49■□□□□ 0.71
RTN4-204ENST00000357732 HEXIM1O94992 359 aaKnown RBP19.49■□□□□ 0.71
RTN4-204ENST00000357732 CDC37Q16543 378 aaPredicted RBP19.49■□□□□ 0.71
RTN4-204ENST00000357732 IFI16Q16666 785 aaKnown RBP19.49■□□□□ 0.71
RTN4-204ENST00000357732 ARHGEF1Q92888 912 aaKnown RBP19.49■□□□□ 0.71
RTN4-204ENST00000357732 INPP4AQ96PE3 977 aaPredicted RBP19.49■□□□□ 0.71
RTN4-204ENST00000357732 PLEKHA4Q9H4M7 779 aa19.49■□□□□ 0.71
RTN4-204ENST00000357732 TRAF5O00463 557 aa19.49■□□□□ 0.71
RTN4-204ENST00000357732 PALMO75781 387 aa19.49■□□□□ 0.71
RTN4-204ENST00000357732 SNHG28P0DPA3 235 aa19.49■□□□□ 0.71
RTN4-204ENST00000357732 PDHBP11177 359 aa19.49■□□□□ 0.71
RTN4-204ENST00000357732 BTDP43251 543 aa19.49■□□□□ 0.71
RTN4-204ENST00000357732 CCDC65Q8IXS2 484 aa19.49■□□□□ 0.71
RTN4-204ENST00000357732 TMEM260Q9NX78 707 aa19.49■□□□□ 0.71
RTN4-204ENST00000357732 BZW2Q9Y6E2 419 aaKnown RBP19.49■□□□□ 0.71
RTN4-204ENST00000357732 BUB1O43683 1085 aa19.48■□□□□ 0.71
RTN4-204ENST00000357732 TLR2O60603 784 aa19.48■□□□□ 0.71
RTN4-204ENST00000357732 ERLIN2O94905 339 aa19.48■□□□□ 0.71
RTN4-204ENST00000357732 GLI1P08151 1106 aa19.48■□□□□ 0.71
RTN4-204ENST00000357732 GRAPQ13588 217 aa19.48■□□□□ 0.71
RTN4-204ENST00000357732 EDRF1Q3B7T1 1238 aa19.48■□□□□ 0.71
RTN4-204ENST00000357732 GRAPLQ8TC17 118 aaPredicted RBP19.48■□□□□ 0.71
RTN4-204ENST00000357732 ARL8AQ96BM9 186 aa19.48■□□□□ 0.71
RTN4-204ENST00000357732 PANK4Q9NVE7 773 aa19.48■□□□□ 0.71
RTN4-204ENST00000357732 SWAP70Q9UH65 585 aa19.48■□□□□ 0.71
RTN4-204ENST00000357732 RTCBQ9Y3I0 505 aaKnown RBP19.48■□□□□ 0.71
RTN4-204ENST00000357732 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.48■□□□□ 0.71
RTN4-204ENST00000357732 KIF13BQ9NQT8 1826 aa19.48■□□□□ 0.71
RTN4-204ENST00000357732 POTEMA6NI47 508 aa19.48■□□□□ 0.71
RTN4-204ENST00000357732 HMGB1P1B2RPK0 211 aaPredicted RBP19.48■□□□□ 0.71
RTN4-204ENST00000357732 TDP2O95551 362 aa19.48■□□□□ 0.71
RTN4-204ENST00000357732 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.48■□□□□ 0.71
RTN4-204ENST00000357732 TEX11Q8IYF3 940 aa19.48■□□□□ 0.71
RTN4-204ENST00000357732 PSMB7Q99436 277 aa19.48■□□□□ 0.71
RTN4-204ENST00000357732 LRIG3Q6UXM1 1119 aa19.47■□□□□ 0.71
RTN4-204ENST00000357732 MICALCLQ6ZW33 695 aa19.47■□□□□ 0.71
RTN4-204ENST00000357732 YTHDF3Q7Z739 585 aaKnown RBP19.47■□□□□ 0.71
RTN4-204ENST00000357732 LSM14BQ9BX40 385 aaKnown RBP19.47■□□□□ 0.71
RTN4-204ENST00000357732 GLT8D2Q9H1C3 349 aa19.47■□□□□ 0.71
RTN4-204ENST00000357732 EPB41L5Q9HCM4 733 aa19.47■□□□□ 0.71
RTN4-204ENST00000357732 GGA2Q9UJY4 613 aa19.47■□□□□ 0.71
RTN4-204ENST00000357732 TMEM59LQ9UK28 342 aa19.47■□□□□ 0.71
RTN4-204ENST00000357732 USP17L5A8MUK1 530 aa19.47■□□□□ 0.71
RTN4-204ENST00000357732 EDIL3O43854 480 aa19.47■□□□□ 0.71
RTN4-204ENST00000357732 MYBP10242 640 aa19.47■□□□□ 0.71
RTN4-204ENST00000357732 CLK2P49760 499 aaKnown RBP19.47■□□□□ 0.71
RTN4-204ENST00000357732 POLR2FP61218 127 aaKnown RBP19.47■□□□□ 0.71
RTN4-204ENST00000357732 MMS22LQ6ZRQ5 1243 aa19.47■□□□□ 0.71
RTN4-204ENST00000357732 ANKRD13CQ8N6S4 541 aa19.47■□□□□ 0.71
RTN4-204ENST00000357732 IPO4Q8TEX9 1081 aaKnown RBP19.47■□□□□ 0.71
RTN4-204ENST00000357732 PBKQ96KB5 322 aa19.47■□□□□ 0.71
RTN4-204ENST00000357732 CALR3Q96L12 384 aaKnown RBP19.47■□□□□ 0.71
RTN4-204ENST00000357732 CCDC43Q96MW1 224 aaKnown RBP19.47■□□□□ 0.71
RTN4-204ENST00000357732 VAT1LQ9HCJ6 419 aa19.47■□□□□ 0.71
RTN4-204ENST00000357732 NLRC4Q9NPP4 1024 aa19.47■□□□□ 0.71
RTN4-204ENST00000357732 EHD2Q9NZN4 543 aa19.47■□□□□ 0.71
RTN4-204ENST00000357732 FOCADQ5VW36 1801 aa19.47■□□□□ 0.71
RTN4-204ENST00000357732 PNMA6FA0A0J9YX94 578 aa19.46■□□□□ 0.71
RTN4-204ENST00000357732 HSPA9P38646 679 aaKnown RBP19.46■□□□□ 0.71
RTN4-204ENST00000357732 CARSP49589 748 aaKnown RBP19.46■□□□□ 0.71
RTN4-204ENST00000357732 GUCY2DQ02846 1103 aa19.46■□□□□ 0.71
RTN4-204ENST00000357732 CUL1Q13616 776 aa19.46■□□□□ 0.71
RTN4-204ENST00000357732 KCNK18Q7Z418 384 aa19.46■□□□□ 0.71
RTN4-204ENST00000357732 USP38Q8NB14 1042 aa19.46■□□□□ 0.71
RTN4-204ENST00000357732 DDX25Q9UHL0 483 aaKnown RBP19.46■□□□□ 0.71
RTN4-204ENST00000357732 CCNL1Q9UK58 526 aaPredicted RBP19.46■□□□□ 0.71
RTN4-204ENST00000357732 NFU1Q9UMS0 254 aa19.46■□□□□ 0.71
RTN4-204ENST00000357732 PITPNM2Q9BZ72 1349 aa19.46■□□□□ 0.71
RTN4-204ENST00000357732 NDUFAB1O14561 156 aa19.46■□□□□ 0.71
RTN4-204ENST00000357732 KLRC1P26715 233 aa19.46■□□□□ 0.71
RTN4-204ENST00000357732 USP8P40818 1118 aa19.46■□□□□ 0.71
RTN4-204ENST00000357732 KLHL30Q0D2K2 578 aa19.46■□□□□ 0.71
RTN4-204ENST00000357732 ASIC2Q16515 512 aa19.46■□□□□ 0.71
RTN4-204ENST00000357732 MICALL1Q8N3F8 863 aa19.46■□□□□ 0.71
RTN4-204ENST00000357732 TBC1D5Q92609 795 aa19.46■□□□□ 0.71
RTN4-204ENST00000357732 TAF4BQ92750 862 aa19.46■□□□□ 0.71
RTN4-204ENST00000357732 MS4A14Q96JA4 679 aa19.46■□□□□ 0.71
RTN4-204ENST00000357732 PLCB1Q9NQ66 1216 aa19.46■□□□□ 0.71
RTN4-204ENST00000357732 MTMR4Q9NYA4 1195 aa19.46■□□□□ 0.71
RTN4-204ENST00000357732 SMARCAL1Q9NZC9 954 aa19.46■□□□□ 0.71
RTN4-204ENST00000357732 PCDHA2Q9Y5H9 948 aa19.46■□□□□ 0.71
RTN4-204ENST00000357732 ZNF233A6NK53 670 aa19.45■□□□□ 0.7
RTN4-204ENST00000357732 MRPL12P52815 198 aaKnown RBP19.45■□□□□ 0.7
RTN4-204ENST00000357732 KIAA0753Q2KHM9 967 aa19.45■□□□□ 0.7
RTN4-204ENST00000357732 ARFGAP2Q8N6H7 521 aa19.45■□□□□ 0.7
RTN4-204ENST00000357732 CUL5Q93034 780 aa19.45■□□□□ 0.7
RTN4-204ENST00000357732 NUDT12Q9BQG2 462 aa19.45■□□□□ 0.7
RTN4-204ENST00000357732 ISCUQ9H1K1 167 aa19.45■□□□□ 0.7
RTN4-204ENST00000357732 EPN3Q9H201 632 aa19.45■□□□□ 0.7
RTN4-204ENST00000357732 GAKO14976 1311 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms