RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 GBP7Q8N8V2 638 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 TXLNGQ9NUQ3 528 aa16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 CEP72Q9P209 647 aa16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 A0A1B0GTH6 734 aa16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 TESPA1A2RU30 521 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 USP17L3A6NCW0 530 aa16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 USP17L4A6NCW7 530 aa16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 RNF8O76064 485 aa16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 TTLL1O95922 423 aa16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 ATP1A1P05023 1023 aaKnown RBP16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 RBBP5Q15291 538 aaKnown RBP16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 PFKFB3Q16875 520 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 USP17L1Q7RTZ2 530 aa16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 POMGNT1Q8WZA1 660 aa16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 CCT6BQ92526 530 aa16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 MEIS1O00470 390 aa16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 NOP56O00567 594 aaKnown RBP16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 SCNN1DP51172 638 aa16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 TAF11Q15544 211 aa16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 NBPF9Q3BBW0 867 aa16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 DDX23Q9BUQ8 820 aaKnown RBP16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 AZI2Q9H6S1 392 aa16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 LEMD3Q9Y2U8 911 aa16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 NCAPD2Q15021 1401 aa16.91■□□□□ 0.3
TRAPPC11-202ENST00000357207 TARSL2A2RTX5 802 aaKnown RBP16.91■□□□□ 0.3
TRAPPC11-202ENST00000357207 GMNCA6NCL1 334 aa16.91■□□□□ 0.3
TRAPPC11-202ENST00000357207 INHBAP08476 426 aa16.91■□□□□ 0.3
TRAPPC11-202ENST00000357207 NT5C2P49902 561 aa16.91■□□□□ 0.3
TRAPPC11-202ENST00000357207 YWHAGP61981 247 aaKnown RBP eCLIP16.91■□□□□ 0.3
TRAPPC11-202ENST00000357207 ENAHQ8N8S7 591 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC11-202ENST00000357207 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC11-202ENST00000357207 H0YCG3 227 aa16.91■□□□□ 0.3
TRAPPC11-202ENST00000357207 TMED2Q15363 201 aa16.91■□□□□ 0.3
TRAPPC11-202ENST00000357207 SPATA4Q8NEY3 305 aa16.91■□□□□ 0.3
TRAPPC11-202ENST00000357207 SNX24Q9Y343 169 aa16.91■□□□□ 0.3
TRAPPC11-202ENST00000357207 PVALEFA0A1B0GWK0 134 aa16.91■□□□□ 0.3
TRAPPC11-202ENST00000357207 PRPF6O94906 941 aaKnown RBP16.91■□□□□ 0.3
TRAPPC11-202ENST00000357207 MMEP08473 750 aa16.91■□□□□ 0.3
TRAPPC11-202ENST00000357207 PROM2Q8N271 834 aa16.91■□□□□ 0.3
TRAPPC11-202ENST00000357207 TRIM11Q96F44 468 aa16.91■□□□□ 0.3
TRAPPC11-202ENST00000357207 CFAP74Q9C0B2 1584 aa16.91■□□□□ 0.3
TRAPPC11-202ENST00000357207 CDC42BPAQ5VT25 1732 aa16.91■□□□□ 0.3
TRAPPC11-202ENST00000357207 SNAP23O00161 211 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 SART1O43290 800 aaKnown RBP16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 SLC16A2P36021 539 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 PDCD7Q8N8D1 485 aaKnown RBP16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 RNF34Q969K3 372 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 TPX2Q9ULW0 747 aaKnown RBP16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 GINS2Q9Y248 185 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 ALAS1P13196 640 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 FAM83BQ5T0W9 1011 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 UBE2TQ9NPD8 197 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 PICK1Q9NRD5 415 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 SERPINB13Q9UIV8 391 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 FBXO2Q9UK22 296 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 ABCC3O15438 1527 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 CRCPO75575 148 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 STAM2O75886 525 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 GFPT1Q06210 699 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 SCYL2Q6P3W7 929 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 KCTD1Q719H9 257 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 RHOT2Q8IXI1 618 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 CEP120Q8N960 986 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 TC2NQ8N9U0 490 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 MADDQ8WXG6 1647 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 CHP1Q99653 195 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 VIPAS39Q9H9C1 493 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 NOP53Q9NZM5 478 aaKnown RBP16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 PODXLO00592 558 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 CYP27B1O15528 508 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 ARHGAP4P98171 946 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 MECOMQ03112 1051 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 FMR1Q06787 632 aaKnown RBP eCLIP16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 DMP1Q13316 513 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 NACC1Q96RE7 527 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 CAPN11Q9UMQ6 739 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 TACC3Q9Y6A5 838 aa16.9■□□□□ 0.3
TRAPPC11-202ENST00000357207 KRT81Q14533 505 aa16.89■□□□□ 0.29
TRAPPC11-202ENST00000357207 RASGRP2Q7LDG7 609 aa16.89■□□□□ 0.29
TRAPPC11-202ENST00000357207 HAUS1Q96CS2 278 aa16.89■□□□□ 0.29
TRAPPC11-202ENST00000357207 TRIM4Q9C037 500 aa16.89■□□□□ 0.29
TRAPPC11-202ENST00000357207 GIPC1O14908 333 aa16.89■□□□□ 0.29
TRAPPC11-202ENST00000357207 NCK2O43639 380 aa16.89■□□□□ 0.29
TRAPPC11-202ENST00000357207 MAGOHP61326 146 aaKnown RBP16.89■□□□□ 0.29
TRAPPC11-202ENST00000357207 KIAA0825Q8IV33 1275 aa16.89■□□□□ 0.29
TRAPPC11-202ENST00000357207 CCHCR1Q8TD31 782 aa16.89■□□□□ 0.29
TRAPPC11-202ENST00000357207 HNRNPDLO14979 420 aaKnown RBP16.89■□□□□ 0.29
TRAPPC11-202ENST00000357207 CA4P22748 312 aa16.89■□□□□ 0.29
TRAPPC11-202ENST00000357207 DLGAP5Q15398 846 aa16.89■□□□□ 0.29
TRAPPC11-202ENST00000357207 GDAP1Q8TB36 358 aa16.89■□□□□ 0.29
TRAPPC11-202ENST00000357207 WDR11Q9BZH6 1224 aa16.89■□□□□ 0.29
TRAPPC11-202ENST00000357207 Q9H521 79 aa16.89■□□□□ 0.29
TRAPPC11-202ENST00000357207 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.89■□□□□ 0.29
TRAPPC11-202ENST00000357207 PARVGQ9HBI0 331 aa16.89■□□□□ 0.29
TRAPPC11-202ENST00000357207 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.89■□□□□ 0.29
TRAPPC11-202ENST00000357207 ANKARQ7Z5J8 1434 aa16.89■□□□□ 0.29
TRAPPC11-202ENST00000357207 WDR17Q8IZU2 1322 aa16.89■□□□□ 0.29
TRAPPC11-202ENST00000357207 EXOC1LA0A1B0GW35 172 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 SGK1O00141 431 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 ACSL3O95573 720 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms