RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 RHOT2Q8IXI1 618 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 TUBGCP2Q9BSJ2 902 aa7.14□□□□□ -1.27
TRIM38-201ENST00000357085 ADD3Q9UEY8 706 aaKnown RBP7.14□□□□□ -1.27
TRIM38-201ENST00000357085 KIF11P52732 1056 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 VPS52Q8N1B4 723 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 AFAP1L2Q8N4X5 818 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 RNPC3Q96LT9 517 aaKnown RBP7.13□□□□□ -1.27
TRIM38-201ENST00000357085 ZMYND12Q9H0C1 365 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 ALCAMQ13740 583 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 TYW1BQ6NUM6 668 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 HAUS1Q96CS2 278 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 RIMBP3CA6NJZ7 1639 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 RIMBP3BA6NNM3 1639 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 RIMBP3Q9UFD9 1639 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 ANP32DO95626 131 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 EXOSC10Q01780 885 aaKnown RBP7.13□□□□□ -1.27
TRIM38-201ENST00000357085 CCDC15Q0P6D6 951 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 BZW1Q7L1Q6 419 aaKnown RBP7.13□□□□□ -1.27
TRIM38-201ENST00000357085 KRT12Q99456 494 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 IRX2Q9BZI1 471 aaPredicted RBP7.13□□□□□ -1.27
TRIM38-201ENST00000357085 SH2B2O14492 632 aaPredicted RBP7.13□□□□□ -1.27
TRIM38-201ENST00000357085 SKAP2O75563 359 aaPredicted RBP7.13□□□□□ -1.27
TRIM38-201ENST00000357085 ANKRD20A3Q5VUR7 823 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 APOA5Q6Q788 366 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 G3BP2Q9UN86 482 aaKnown RBP7.13□□□□□ -1.27
TRIM38-201ENST00000357085 ATRNO75882 1429 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 KLHL30Q0D2K2 578 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 SYCP2LQ5T4T6 812 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 ZNF572Q7Z3I7 529 aaPredicted RBP7.13□□□□□ -1.27
TRIM38-201ENST00000357085 LRRC8CQ8TDW0 803 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 SEPT11Q9NVA2 429 aaKnown RBP7.13□□□□□ -1.27
TRIM38-201ENST00000357085 CD2APQ9Y5K6 639 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 MROH7-TTC4A0A0A0MT08 1334 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 TJP1Q07157 1748 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 CDKAL1Q5VV42 579 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 SH2D3CQ8N5H7 860 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 PA2G4Q9UQ80 394 aaKnown RBP7.13□□□□□ -1.27
TRIM38-201ENST00000357085 ATP6V0A2Q9Y487 856 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 PCDH11XQ9BZA7 1347 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 MST1RQ04912 1400 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 NPEPPSP55786 919 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 FAM43BQ6ZT52 329 aaPredicted RBP7.13□□□□□ -1.27
TRIM38-201ENST00000357085 ZNF512BQ96KM6 892 aaPredicted RBP7.13□□□□□ -1.27
TRIM38-201ENST00000357085 CLIC6Q96NY7 704 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 LRP2BPQ9P2M1 347 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 CCDC88AQ3V6T2 1871 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 MYBL2P10244 700 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 HSPA9P38646 679 aaKnown RBP7.13□□□□□ -1.27
TRIM38-201ENST00000357085 CABP4P57796 275 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 SLC7A5Q01650 507 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 TFCP2Q12800 502 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 PUM3Q15397 648 aaKnown RBP7.13□□□□□ -1.27
TRIM38-201ENST00000357085 CAVIN4Q5BKX8 364 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 CHST3Q7LGC8 479 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 DPF2Q92785 391 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 ZNF652Q9Y2D9 606 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 FRMD4BQ9Y2L6 1034 aa7.13□□□□□ -1.27
TRIM38-201ENST00000357085 SLC9C2Q5TAH2 1124 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 ABTB1Q969K4 478 aaPredicted RBP7.12□□□□□ -1.27
TRIM38-201ENST00000357085 USP15Q9Y4E8 981 aaPredicted RBP7.12□□□□□ -1.27
TRIM38-201ENST00000357085 MAP3K19Q56UN5 1328 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 BAG3O95817 575 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 CMPK2Q5EBM0 449 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 CENPUQ71F23 418 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 GORASP1Q9BQQ3 440 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 OPHN1O60890 802 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 HARSP12081 509 aaKnown RBP7.12□□□□□ -1.27
TRIM38-201ENST00000357085 CCNE1P24864 410 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 TPP2P29144 1249 aaPredicted RBP7.12□□□□□ -1.27
TRIM38-201ENST00000357085 XIAPP98170 497 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 DR1Q01658 176 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 LIN9Q5TKA1 542 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 TRPM8Q7Z2W7 1104 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 NUDCD1Q96RS6 583 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 DDX20Q9UHI6 824 aaKnown RBP7.12□□□□□ -1.27
TRIM38-201ENST00000357085 PAEPP09466 180 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 CUL4BQ13620 913 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 PPP1R18Q6NYC8 613 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 IP6K1Q92551 441 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 HPSEQ9Y251 543 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.12□□□□□ -1.27
TRIM38-201ENST00000357085 NEURL1BA8MQ27 555 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 PRPF3O43395 683 aaKnown RBP7.12□□□□□ -1.27
TRIM38-201ENST00000357085 XRCC5P13010 732 aaKnown RBP7.12□□□□□ -1.27
TRIM38-201ENST00000357085 COG7P83436 770 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 ARHGAP4P98171 946 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 C11orf91Q3C1V1 193 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 P2RX5Q93086 422 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 KIF13AQ9H1H9 1805 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 GPAA1O43292 621 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 RAD23BP54727 409 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 RIPPLY1Q0D2K3 151 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 RAD9BQ6WBX8 426 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 UNC13DQ70J99 1090 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 HS2ST1Q7LGA3 356 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 CRACR2BQ8N4Y2 399 aaPredicted RBP7.12□□□□□ -1.27
TRIM38-201ENST00000357085 OGFOD1Q8N543 542 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 ISCUQ9H1K1 167 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 SH2D4AQ9H788 454 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 MMRN2Q9H8L6 949 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms