RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 CEP120Q8N960 986 aa13.71□□□□□ -0.21
BDNF-202ENST00000356660 LARP4BQ92615 738 aaKnown RBP13.71□□□□□ -0.21
BDNF-202ENST00000356660 MTMR8Q96EF0 704 aa13.71□□□□□ -0.21
BDNF-202ENST00000356660 TAF1DQ9H5J8 278 aaPredicted RBP13.71□□□□□ -0.21
BDNF-202ENST00000356660 RNF14Q9UBS8 474 aa13.71□□□□□ -0.21
BDNF-202ENST00000356660 MTRF1LQ9UGC7 380 aaKnown RBP13.71□□□□□ -0.21
BDNF-202ENST00000356660 RASAL2Q9UJF2 1139 aa13.71□□□□□ -0.21
BDNF-202ENST00000356660 SLIT1O75093 1534 aa13.71□□□□□ -0.21
BDNF-202ENST00000356660 USP17L3A6NCW0 530 aa13.71□□□□□ -0.22
BDNF-202ENST00000356660 USP17L4A6NCW7 530 aa13.71□□□□□ -0.22
BDNF-202ENST00000356660 FLOT1O75955 427 aa13.71□□□□□ -0.22
BDNF-202ENST00000356660 KLRC1P26715 233 aa13.71□□□□□ -0.22
BDNF-202ENST00000356660 PCK1P35558 622 aa13.71□□□□□ -0.22
BDNF-202ENST00000356660 PPP2R2AP63151 447 aa13.71□□□□□ -0.22
BDNF-202ENST00000356660 FAM83BQ5T0W9 1011 aa13.71□□□□□ -0.22
BDNF-202ENST00000356660 SMIM5Q71RC9 77 aa13.71□□□□□ -0.22
BDNF-202ENST00000356660 ARMCX6Q7L4S7 300 aa13.71□□□□□ -0.22
BDNF-202ENST00000356660 USP17L1Q7RTZ2 530 aa13.71□□□□□ -0.22
BDNF-202ENST00000356660 SPATA20Q8TB22 786 aa13.71□□□□□ -0.22
BDNF-202ENST00000356660 TBCKQ8TEA7 893 aa13.71□□□□□ -0.22
BDNF-202ENST00000356660 CASKIN2Q8WXE0 1202 aa13.71□□□□□ -0.22
BDNF-202ENST00000356660 MLXIPLQ9NP71 852 aa13.71□□□□□ -0.22
BDNF-202ENST00000356660 PCDHB13Q9Y5F0 798 aa13.71□□□□□ -0.22
BDNF-202ENST00000356660 USP17L8P0C7I0 530 aa13.7□□□□□ -0.22
BDNF-202ENST00000356660 SETSIPP0DME0 302 aa13.7□□□□□ -0.22
BDNF-202ENST00000356660 FAM26FQ5R3K3 315 aa13.7□□□□□ -0.22
BDNF-202ENST00000356660 SCNN1DP51172 638 aa13.7□□□□□ -0.22
BDNF-202ENST00000356660 ADAM9Q13443 819 aa13.7□□□□□ -0.22
BDNF-202ENST00000356660 USH1GQ495M9 461 aa13.7□□□□□ -0.22
BDNF-202ENST00000356660 TTI2Q6NXR4 508 aa13.7□□□□□ -0.22
BDNF-202ENST00000356660 CYB5D1Q6P9G0 228 aa13.7□□□□□ -0.22
BDNF-202ENST00000356660 GIMAP8Q8ND71 665 aaPredicted RBP13.7□□□□□ -0.22
BDNF-202ENST00000356660 WDR66Q8TBY9 1149 aa13.7□□□□□ -0.22
BDNF-202ENST00000356660 IQCDQ96DY2 449 aa13.7□□□□□ -0.22
BDNF-202ENST00000356660 PLAGL2Q9UPG8 496 aa13.7□□□□□ -0.22
BDNF-202ENST00000356660 A0A1W2PRG0 241 aa13.7□□□□□ -0.22
BDNF-202ENST00000356660 H2AFZP0C0S5 128 aa13.7□□□□□ -0.22
BDNF-202ENST00000356660 FKBP3Q00688 224 aaKnown RBP13.7□□□□□ -0.22
BDNF-202ENST00000356660 TRADDQ15628 312 aa13.7□□□□□ -0.22
BDNF-202ENST00000356660 H2AFVQ71UI9 128 aa13.7□□□□□ -0.22
BDNF-202ENST00000356660 RNF217Q8TC41 542 aa13.7□□□□□ -0.22
BDNF-202ENST00000356660 MRRFQ96E11 262 aaKnown RBP13.7□□□□□ -0.22
BDNF-202ENST00000356660 SEC16BQ96JE7 1060 aa13.7□□□□□ -0.22
BDNF-202ENST00000356660 SPATS2LQ9NUQ6 558 aaKnown RBP13.7□□□□□ -0.22
BDNF-202ENST00000356660 AMFRQ9UKV5 643 aa13.7□□□□□ -0.22
BDNF-202ENST00000356660 POTEMA6NI47 508 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 SERPING1P05155 500 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 NAIF1Q69YI7 327 aaPredicted RBP13.69□□□□□ -0.22
BDNF-202ENST00000356660 OTUD6AQ7L8S5 288 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 PAF1Q8N7H5 531 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 WDR17Q8IZU2 1322 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 MON2Q7Z3U7 1717 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 DIP2BQ9P265 1576 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 SART1O43290 800 aaKnown RBP13.69□□□□□ -0.22
BDNF-202ENST00000356660 RHOBTB3O94955 611 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 MRPL12P52815 198 aaKnown RBP13.69□□□□□ -0.22
BDNF-202ENST00000356660 KDM7AQ6ZMT4 941 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 IRF2BP1Q8IU81 584 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 EGFL6Q8IUX8 553 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 MARCH10Q8NA82 808 aaPredicted RBP13.69□□□□□ -0.22
BDNF-202ENST00000356660 COL4A3BPQ9Y5P4 624 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 MMEP08473 750 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 ATP11AP98196 1134 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 TROAPQ12815 778 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 KCNB1Q14721 858 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 CCDC6Q16204 474 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 KLHL29Q96CT2 875 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 BICD1Q96G01 975 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 MTRQ99707 1265 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 PANK4Q9NVE7 773 aa13.69□□□□□ -0.22
BDNF-202ENST00000356660 ARHGAP44Q17R89 818 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 GRIPAP1Q4V328 841 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 ZKSCAN4Q969J2 545 aaPredicted RBP13.68□□□□□ -0.22
BDNF-202ENST00000356660 FMO2Q99518 471 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 PPP1R12CQ9BZL4 782 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 DIP2AQ14689 1571 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 ZNF233A6NK53 670 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 DOK7Q18PE1 504 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 SWT1Q5T5J6 900 aaKnown RBP13.68□□□□□ -0.22
BDNF-202ENST00000356660 ALKBH5Q6P6C2 394 aaKnown RBP13.68□□□□□ -0.22
BDNF-202ENST00000356660 VSIG1Q86XK7 387 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 CPXCR1Q8N123 301 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 LRRC47Q8N1G4 583 aaKnown RBP13.68□□□□□ -0.22
BDNF-202ENST00000356660 FAM167BQ9BTA0 163 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 TLR10Q9BXR5 811 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 SNX24Q9Y343 169 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 FRMPD2Q68DX3 1309 aaPredicted RBP13.68□□□□□ -0.22
BDNF-202ENST00000356660 FGGP02679 453 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 CSF1RP07333 972 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 VPS41P49754 854 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 CALCOCO2Q13137 446 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 USP17L2Q6R6M4 530 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 CCDC105Q8IYK2 499 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 SPDL1Q96EA4 605 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 SGSM3Q96HU1 749 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 TCHPQ9BT92 498 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 VCPKMTQ9H867 229 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 ZNF335Q9H4Z2 1342 aaPredicted RBP13.68□□□□□ -0.22
BDNF-202ENST00000356660 GJC1P36383 396 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 HSD17B3P37058 310 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms