RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 CUL3Q13618 768 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 ZNF513Q8N8E2 541 aaPredicted RBP8.49□□□□□ -1.05
VANGL1-202ENST00000355485 NEK9Q8TD19 979 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 RAPGEF5Q92565 580 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 ATP6V1G3Q96LB4 118 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 PCDHB6Q9Y5E3 794 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 TMOD1P28289 359 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 USH1GQ495M9 461 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 TTC17Q96AE7 1141 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 TMEM247A6NEH6 219 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 LMNAP02545 664 aaKnown RBP8.49□□□□□ -1.05
VANGL1-202ENST00000355485 BCRP11274 1271 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 SERPINB4P48594 390 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 CTCFP49711 727 aaPredicted RBP8.49□□□□□ -1.05
VANGL1-202ENST00000355485 PMS1P54277 932 aaKnown RBP8.49□□□□□ -1.05
VANGL1-202ENST00000355485 EPHB1P54762 984 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 BFSP1Q12934 665 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 RETREG2Q8NC44 543 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 SEC16BQ96JE7 1060 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 NT5C3AQ9H0P0 336 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 RPRD1BQ9NQG5 326 aaKnown RBP8.49□□□□□ -1.05
VANGL1-202ENST00000355485 FRMPD2Q68DX3 1309 aaPredicted RBP8.49□□□□□ -1.05
VANGL1-202ENST00000355485 KCNA3P22001 575 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 PMS2P54278 862 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 ADAM9Q13443 819 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 ZNF658Q5TYW1 1059 aaPredicted RBP8.49□□□□□ -1.05
VANGL1-202ENST00000355485 ARL10Q8N8L6 244 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 SDCCAG3Q96C92 435 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 FAM89AQ96GI7 184 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 RMDN2Q96LZ7 410 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 TRIM45Q9H8W5 580 aaPredicted RBP8.49□□□□□ -1.05
VANGL1-202ENST00000355485 ABHD10Q9NUJ1 306 aa8.49□□□□□ -1.05
VANGL1-202ENST00000355485 SEC24DO94855 1032 aaPredicted RBP8.48□□□□□ -1.05
VANGL1-202ENST00000355485 ZNF211Q13398 564 aaPredicted RBP8.48□□□□□ -1.05
VANGL1-202ENST00000355485 SGO2Q562F6 1265 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 KIAA1841Q6NSI8 718 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 ZNF654Q8IZM8 581 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 ENOX1Q8TC92 643 aaKnown RBP8.48□□□□□ -1.05
VANGL1-202ENST00000355485 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.48□□□□□ -1.05
VANGL1-202ENST00000355485 SPZ1Q9BXG8 430 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 ALG13Q9NP73 1137 aaKnown RBP8.48□□□□□ -1.05
VANGL1-202ENST00000355485 INPP5FQ9Y2H2 1132 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 BZW2Q9Y6E2 419 aaKnown RBP8.48□□□□□ -1.05
VANGL1-202ENST00000355485 CLIC2O15247 247 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 CYTH1Q15438 398 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 TMC4Q7Z404 712 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 RNPC3Q96LT9 517 aaKnown RBP8.48□□□□□ -1.05
VANGL1-202ENST00000355485 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.48□□□□□ -1.05
VANGL1-202ENST00000355485 TFR2Q9UP52 801 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 TRAF3IP3Q9Y228 551 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 KCNQ3O43525 872 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 INHBAP08476 426 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 TSTA3Q13630 321 aaPredicted RBP8.48□□□□□ -1.05
VANGL1-202ENST00000355485 C6orf118Q5T5N4 469 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 RNF207Q6ZRF8 634 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 PDZD4Q76G19 769 aaPredicted RBP8.48□□□□□ -1.05
VANGL1-202ENST00000355485 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.48□□□□□ -1.052e-6■■■■■ 54.9
VANGL1-202ENST00000355485 DLGAP2Q9P1A6 1054 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 TRPC5Q9UL62 973 aaPredicted RBP8.48□□□□□ -1.05
VANGL1-202ENST00000355485 RAP1GDS1P52306 607 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 RPS6KC1Q96S38 1066 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 ANO3Q9BYT9 981 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 ECEL1O95672 775 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 MCF2P10911 925 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.48□□□□□ -1.05
VANGL1-202ENST00000355485 MAP4K1Q92918 833 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 FMO2Q99518 471 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 KRT82Q9NSB4 513 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 GINM1Q9NU53 330 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 PPARGC1AQ9UBK2 798 aaKnown RBP8.48□□□□□ -1.05
VANGL1-202ENST00000355485 DNM3Q9UQ16 869 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 MAP3K5Q99683 1374 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 DNMT1P26358 1616 aaKnown RBP8.48□□□□□ -1.05
VANGL1-202ENST00000355485 FAM135BQ49AJ0 1406 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 ABL1P00519 1130 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 BAG6P46379 1132 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 NR5A1Q13285 461 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 IDI1Q13907 227 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 RFX6Q8HWS3 928 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 NDUFAF2Q8N183 169 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 CCT8L2Q96SF2 557 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 MTIF3Q9H2K0 278 aaKnown RBP8.48□□□□□ -1.05
VANGL1-202ENST00000355485 ABCC2Q92887 1545 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 RIMBP2O15034 1052 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 CAND2O75155 1236 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 DNAJC8O75937 253 aaPredicted RBP8.48□□□□□ -1.05
VANGL1-202ENST00000355485 CYP21A2P08686 494 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 ZFXP17010 805 aaPredicted RBP8.48□□□□□ -1.05
VANGL1-202ENST00000355485 PSMA3P25788 255 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 ATXN3P54252 364 aaPredicted RBP8.48□□□□□ -1.05
VANGL1-202ENST00000355485 SMAD1Q15797 465 aaKnown RBP8.48□□□□□ -1.05
VANGL1-202ENST00000355485 TEKT4Q8WW24 435 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 P2RX5Q93086 422 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 TGS1Q96RS0 853 aaKnown RBP8.48□□□□□ -1.05
VANGL1-202ENST00000355485 TRPV6Q9H1D0 765 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 DONSONQ9NYP3 566 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 ADGRG1Q9Y653 693 aa8.48□□□□□ -1.05
VANGL1-202ENST00000355485 ZNF263O14978 683 aa8.47□□□□□ -1.05
VANGL1-202ENST00000355485 MT-ND3P03897 115 aa8.47□□□□□ -1.05
VANGL1-202ENST00000355485 ARL8AQ96BM9 186 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms