RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 DNMT1P26358 1616 aaKnown RBP13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 A0A0G2JND7 137 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 WDR91A4D1P6 747 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 KLRF2D3W0D1 207 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 TRIM66O15016 1216 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 FGGP02679 453 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 GCFC2P16383 781 aaKnown RBP13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 TAB3Q8N5C8 712 aaPredicted RBP13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 CEP19Q96LK0 163 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 SYNGAP1Q96PV0 1343 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 SRGAP2O75044 1071 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 GCP02774 474 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 IL1RL1Q01638 556 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 LCA5Q86VQ0 697 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 GPKOWQ92917 476 aaPredicted RBP eCLIP13.72□□□□□ -0.211e-14■■□□□ 11.6
SYNCRIP-201ENST00000355238 UIMC1Q96RL1 719 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 LGR6Q9HBX8 967 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 PPP1R37O75864 691 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 FAM102BQ5T8I3 360 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 TEDDM1Q5T9Z0 273 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 NUDCD1Q96RS6 583 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 MRPL40Q9NQ50 206 aaKnown RBP13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 PAIP2BQ9ULR5 123 aaKnown RBP13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 SATB2Q9UPW6 733 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 SAT1P21673 171 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 SMCR8Q8TEV9 937 aaPredicted RBP13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 TAF1DQ9H5J8 278 aaPredicted RBP13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 PPARGC1AQ9UBK2 798 aaKnown RBP13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 LGALS16A8MUM7 142 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 MIF4GDA9UHW6 222 aaKnown RBP13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 HNRNPCL1O60812 293 aaKnown RBP13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 ADAMTS2O95450 1211 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 FSCBQ5H9T9 825 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 ALKBH5Q6P6C2 394 aaKnown RBP13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 SESTD1Q86VW0 696 aa13.72□□□□□ -0.21
SYNCRIP-201ENST00000355238 ESYT2A0FGR8 921 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 EIF3HO15372 352 aaKnown RBP eCLIP13.71□□□□□ -0.212e-12■□□□□ 9.7
SYNCRIP-201ENST00000355238 PALMO75781 387 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 TNNC2P02585 160 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 PMS2P54278 862 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 CUL3Q13618 768 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 EPM2AIP1Q7L775 607 aaPredicted RBP13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 WDR7Q9Y4E6 1490 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 RASA4BC9J798 803 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 CTIFO43310 598 aaKnown RBP13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 RASA4O43374 803 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 GFPT2O94808 682 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 KRT10P13645 584 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 IFNAR1P17181 557 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 PRPSAP1Q14558 356 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 TMEM232C9JQI7 657 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 PLCB4Q15147 1175 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 NECTIN1Q15223 517 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 ZNF589Q86UQ0 364 aaPredicted RBP13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 GSPT2Q8IYD1 628 aaKnown RBP13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 PYROXD1Q8WU10 500 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 THOC1Q96FV9 657 aaKnown RBP13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 AZI2Q9H6S1 392 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 GCNT4Q9P109 453 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 ANKFY1Q9P2R3 1169 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 ZBTB22O15209 634 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 CFLARO15519 480 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 KRT1P04264 644 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 SRRM1Q8IYB3 904 aaKnown RBP13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.71□□□□□ -0.219e-8■■■■■ 39.4
SYNCRIP-201ENST00000355238 KIAA1024Q9UPX6 916 aa13.71□□□□□ -0.21
SYNCRIP-201ENST00000355238 A6NJR5 290 aa13.71□□□□□ -0.22
SYNCRIP-201ENST00000355238 FBXW10Q5XX13 1052 aa13.71□□□□□ -0.22
SYNCRIP-201ENST00000355238 PDIK1LQ8N165 341 aa13.71□□□□□ -0.22
SYNCRIP-201ENST00000355238 RBM17Q96I25 401 aaKnown RBP13.71□□□□□ -0.22
SYNCRIP-201ENST00000355238 KRT82Q9NSB4 513 aa13.71□□□□□ -0.22
SYNCRIP-201ENST00000355238 SEPT10Q9P0V9 454 aa13.71□□□□□ -0.22
SYNCRIP-201ENST00000355238 TRPC5Q9UL62 973 aaPredicted RBP13.71□□□□□ -0.22
SYNCRIP-201ENST00000355238 PPP4R3CPQ6ZMV5 832 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 MAPKAPK5Q8IW41 473 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 TTC25Q96NG3 672 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 SPC25Q9HBM1 224 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 TLK1Q9UKI8 766 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 SLC4A7Q9Y6M7 1214 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 MCF2L2Q86YR7 1114 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 ICA1LQ8NDH6 482 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 TGFBRAP1Q8WUH2 860 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 POLR3CQ9BUI4 534 aaPredicted RBP13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 GOLGA8CPA6NN73 597 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 ZBBXA8MT70 800 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 DLATP10515 647 aaKnown RBP13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 MDH1P40925 334 aaKnown RBP13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 ARL6IP4Q66PJ3 421 aaKnown RBP13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 FAM47EQ6ZV65 393 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 CCDC127Q96BQ5 260 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 PGBD1Q96JS3 809 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 PLEKHF1Q96S99 279 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 SMYD2Q9NRG4 433 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 APOBEC2Q9Y235 224 aaKnown RBP13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 KRT37O76014 449 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 ZNF579Q8NAF0 562 aaKnown RBP13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 ZNF473Q8WTR7 871 aaKnown RBP13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 NOP56O00567 594 aaKnown RBP13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 UFL1O94874 794 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 STAT2P52630 851 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms