RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 PLTPP55058 493 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 ARMC9Q7Z3E5 817 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 KIAA0825Q8IV33 1275 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 NEMP1O14524 444 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 SERPINI2O75830 405 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 NSUN2Q08J23 767 aaKnown RBP eCLIP6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 HSPH1Q92598 858 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 EEF2KMTQ96G04 330 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 LLGL1Q15334 1064 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 RPF1Q9H9Y2 349 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 OCA2Q04671 838 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 G2E3Q7L622 706 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 CDHR1Q96JP9 859 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 ABT1Q9ULW3 272 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 EXOC1LA0A1B0GW35 172 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 PTGDRQ13258 359 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 ST13P4Q8IZP2 240 aaPredicted RBP6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 SYMPKQ92797 1274 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 HAUS4Q9H6D7 363 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 MAGEF1Q9HAY2 307 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 E9PMD0 336 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 NR2F2P24468 414 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 FAM133BQ5BKY9 247 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 TMCO5AQ8N6Q1 288 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 ENOX1Q8TC92 643 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 ULK4Q96C45 1275 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 PHACTR3Q96KR7 559 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 USP21Q9UK80 565 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 CREB3O43889 395 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 FLAD1Q8NFF5 587 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 GCNT4Q9P109 453 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 POLIQ9UNA4 740 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 TMEM206Q9H813 350 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 SRGAP2CP0DJJ0 459 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 TBC1D10BQ4KMP7 808 aaPredicted RBP6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 OR6B2Q6IFH4 312 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 ARMCX2Q7L311 632 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 FASTKD5Q7L8L6 764 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 ELMOD1Q8N336 334 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 EPN1Q9Y6I3 576 aaPredicted RBP6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 ADCY1Q08828 1119 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 GOLGA8FQ08AF8 430 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 GOLGA8DPQ0D2H9 430 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 NCKAP5LQ9HCH0 1330 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 CNOT10Q9H9A5 744 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 TMEM232C9JQI7 657 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 MAPK13O15264 365 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 CTNND1O60716 968 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 GOLGA8HP0CJ92 632 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 MCF2P10911 925 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 SUPT20HL1Q3ZLR7 823 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 MTBPQ96DY7 904 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 NAF1Q96HR8 494 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 TAGAPQ8N103 731 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 PYROXD1Q8WU10 500 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 UBE2TQ9NPD8 197 aaPredicted RBP6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 SUN2Q9UH99 717 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 SPATA1Q5VX52 437 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 GRAMD4Q6IC98 578 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 IFNL3Q8IZI9 196 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 OTULINQ96BN8 352 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 L3MBTL1Q9Y468 752 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 GAP43P17677 238 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 COPB1P53618 953 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 ZNF445P59923 1031 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 GIMAP4Q9NUV9 329 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 SCARA5Q6ZMJ2 495 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 IFT43Q96FT9 208 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 HEXIM2Q96MH2 286 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 SYTL2Q9HCH5 934 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 ZNF263O14978 683 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 MARK3P27448 753 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 LRRC23Q53EV4 343 aaPredicted RBP6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 C16orf87Q6PH81 154 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 MYCBPQ99417 103 aaPredicted RBP6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 ZBED2Q9BTP6 218 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 VCPP55072 806 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 SPICE1Q8N0Z3 855 aa6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 DDX17Q92841 729 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-201ENST00000355086 PAPOLAP51003 745 aaKnown RBP6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 FANCBQ8NB91 859 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 ZBED1O96006 694 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 C10orf76Q5T2E6 689 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 CUEDC2Q9H467 287 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 IQANK1A0A1B0GTG1 560 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 ASPSCR1Q9BZE9 553 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 ABCC1P33527 1531 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 MOCS3O95396 460 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 MXD4Q14582 209 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 ZNF274Q96GC6 653 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 ABHD8Q96I13 439 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 DDAH1O94760 285 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 TRIP13Q15645 432 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 LRRC8AQ8IWT6 810 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 TUBGCP2Q9BSJ2 902 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 CXCR5P32302 372 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 SLC9A5Q14940 896 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 CEP170P1Q96L14 293 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 CLIC6Q96NY7 704 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms