RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 NLRP4Q96MN2 994 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 PARVGQ9HBI0 331 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 ANKRD62A6NC57 917 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 EVCP57679 992 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 NUP58Q9BVL2 599 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 KMT5AQ9NQR1 393 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 CTTNBP2NLQ9P2B4 639 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 STK24Q9Y6E0 443 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 IKBKBO14920 756 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 CCND2P30279 289 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 KRT31Q15323 416 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 SESTD1Q86VW0 696 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 GDAP1L1Q96MZ0 367 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 NAA15Q9BXJ9 866 aaKnown RBP13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 ST7Q9NRC1 585 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 AKT3Q9Y243 479 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 USTQ9Y2C2 406 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 WNT10BO00744 389 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 EXOC3L4Q17RC7 722 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 C9orf131Q5VYM1 1079 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 GPATCH11Q8N954 259 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 TRIM31Q9BZY9 425 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 FAM49AQ9H0Q0 323 aaPredicted RBP13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 GBP3Q9H0R5 595 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 RIC8AQ9NPQ8 531 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 H0YHG0 523 aa13.56□□□□□ -0.24
PCDHB11-201ENST00000354757 STAT1P42224 750 aa13.56□□□□□ -0.24
PCDHB11-201ENST00000354757 SETQ01105 290 aaPredicted RBP13.56□□□□□ -0.24
PCDHB11-201ENST00000354757 SHROOM1Q2M3G4 852 aaPredicted RBP13.56□□□□□ -0.24
PCDHB11-201ENST00000354757 FAM186BQ8IYM0 893 aa13.56□□□□□ -0.24
PCDHB11-201ENST00000354757 ZNF280CQ8ND82 737 aa13.56□□□□□ -0.24
PCDHB11-201ENST00000354757 CEP83Q9Y592 693 aa13.56□□□□□ -0.24
PCDHB11-201ENST00000354757 FAM205AQ6ZU69 1335 aa13.56□□□□□ -0.24
PCDHB11-201ENST00000354757 ZBTB33Q86T24 672 aa13.56□□□□□ -0.24
PCDHB11-201ENST00000354757 BEGAINQ9BUH8 593 aa13.56□□□□□ -0.24
PCDHB11-201ENST00000354757 FAM217BQ9NTX9 383 aaPredicted RBP13.56□□□□□ -0.24
PCDHB11-201ENST00000354757 PPP2R2CQ9Y2T4 447 aa13.56□□□□□ -0.24
PCDHB11-201ENST00000354757 TEX33O43247 280 aa13.56□□□□□ -0.24
PCDHB11-201ENST00000354757 SHMT1P34896 483 aa13.56□□□□□ -0.24
PCDHB11-201ENST00000354757 CEP55Q53EZ4 464 aa13.56□□□□□ -0.24
PCDHB11-201ENST00000354757 SWSAP1Q6NVH7 229 aa13.56□□□□□ -0.24
PCDHB11-201ENST00000354757 MAATS1Q7Z4T9 603 aa13.56□□□□□ -0.24
PCDHB11-201ENST00000354757 ZNF579Q8NAF0 562 aaKnown RBP13.56□□□□□ -0.24
PCDHB11-201ENST00000354757 DHTKD1Q96HY7 919 aaPredicted RBP13.56□□□□□ -0.24
PCDHB11-201ENST00000354757 NRBP2Q9NSY0 501 aa13.56□□□□□ -0.24
PCDHB11-201ENST00000354757 PDE4DIPQ5VU43 2346 aa13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 PALM3A6NDB9 673 aaPredicted RBP13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 SOWAHDA6NJG2 315 aa13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 ENC1O14682 589 aa13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 ZBTB8OSQ8IWT0 167 aa13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 PROM2Q8N271 834 aa13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 C2orf69Q8N8R5 385 aa13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 ACRBPQ8NEB7 543 aa13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 AGBL3Q8NEM8 1001 aa13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 NSUN6Q8TEA1 469 aaKnown RBP13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 SECISBP2LQ93073 1101 aaKnown RBP13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 TOB1P50616 345 aaPredicted RBP13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 RHBDL3P58872 404 aa13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 COG2Q14746 738 aa13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 CCDC144BQ3MJ40 725 aa13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 MAP9Q49MG5 647 aa13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 GBP6Q6ZN66 633 aa13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 NAPGQ99747 312 aaPredicted RBP13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 PPP2R3AQ06190 1150 aa13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 CYFIP1Q7L576 1253 aa13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 ADAT2Q7Z6V5 191 aaKnown RBP13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 DPF2Q92785 391 aa13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 ARFGAP3Q9NP61 516 aa13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 GABBR1Q9UBS5 961 aa13.55□□□□□ -0.24
PCDHB11-201ENST00000354757 STX10O60499 249 aa13.54□□□□□ -0.24
PCDHB11-201ENST00000354757 SEPT7Q16181 437 aaKnown RBP13.54□□□□□ -0.24
PCDHB11-201ENST00000354757 LXNQ9BS40 222 aa13.54□□□□□ -0.24
PCDHB11-201ENST00000354757 SELENOOQ9BVL4 669 aa13.54□□□□□ -0.24
PCDHB11-201ENST00000354757 SPTLC3Q9NUV7 552 aa13.54□□□□□ -0.24
PCDHB11-201ENST00000354757 SLC37A4O43826 429 aa13.54□□□□□ -0.24
PCDHB11-201ENST00000354757 LMNB1P20700 586 aa13.54□□□□□ -0.24
PCDHB11-201ENST00000354757 CAP2P40123 477 aa13.54□□□□□ -0.24
PCDHB11-201ENST00000354757 PKN1Q16512 942 aa13.54□□□□□ -0.24
PCDHB11-201ENST00000354757 ZMYND12Q9H0C1 365 aa13.54□□□□□ -0.24
PCDHB11-201ENST00000354757 EPN1Q9Y6I3 576 aaPredicted RBP13.54□□□□□ -0.24
PCDHB11-201ENST00000354757 BCRP11274 1271 aa13.54□□□□□ -0.24
PCDHB11-201ENST00000354757 PADI6Q6TGC4 694 aa13.54□□□□□ -0.24
PCDHB11-201ENST00000354757 GOLGA1Q92805 767 aa13.54□□□□□ -0.24
PCDHB11-201ENST00000354757 MMS19Q96T76 1030 aa13.54□□□□□ -0.24
PCDHB11-201ENST00000354757 AGXT2Q9BYV1 514 aa13.54□□□□□ -0.24
PCDHB11-201ENST00000354757 MAGEF1Q9HAY2 307 aa13.54□□□□□ -0.24
PCDHB11-201ENST00000354757 RWDD2AQ9UIY3 292 aa13.54□□□□□ -0.24
PCDHB11-201ENST00000354757 SMIM23A6NLE4 172 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 SLC16A4O15374 487 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 CEP104O60308 925 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 NT5C2P49902 561 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 FMR1Q06787 632 aaKnown RBP eCLIP13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 CKAP4Q07065 602 aaKnown RBP13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 STXBP2Q15833 593 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 PHLDB2Q86SQ0 1253 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 CCDC25Q86WR0 208 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 EIF2AK1Q9BQI3 630 aaKnown RBP13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 SLC5A4Q9NY91 659 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 GOLGA6L10A0A0M3HER8 536 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms