RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 ZNF277Q9NRM2 450 aaPredicted RBP11.91□□□□□ -0.5
SND1-201ENST00000354725 SAMSN1Q9NSI8 373 aaKnown RBP11.91□□□□□ -0.5
SND1-201ENST00000354725 HOOK1Q9UJC3 728 aaKnown RBP11.91□□□□□ -0.5
SND1-201ENST00000354725 SLC12A7Q9Y666 1083 aa11.91□□□□□ -0.5
SND1-201ENST00000354725 PAPPA2Q9BXP8 1791 aa11.91□□□□□ -0.5
SND1-201ENST00000354725 ERICH2A1L162 156 aa11.91□□□□□ -0.5
SND1-201ENST00000354725 RAD9BQ6WBX8 426 aa11.91□□□□□ -0.5
SND1-201ENST00000354725 MICALCLQ6ZW33 695 aa11.91□□□□□ -0.5
SND1-201ENST00000354725 USP49Q70CQ1 688 aa11.91□□□□□ -0.5
SND1-201ENST00000354725 USP33Q8TEY7 942 aa11.91□□□□□ -0.5
SND1-201ENST00000354725 HOOK2Q96ED9 719 aa11.91□□□□□ -0.5
SND1-201ENST00000354725 SLC26A6Q9BXS9 759 aa11.91□□□□□ -0.5
SND1-201ENST00000354725 ANKZF1Q9H8Y5 726 aa11.91□□□□□ -0.5
SND1-201ENST00000354725 KIAA0754O94854 1291 aa11.91□□□□□ -0.5
SND1-201ENST00000354725 PDHBP11177 359 aa11.91□□□□□ -0.5
SND1-201ENST00000354725 MCCD1P59942 119 aaPredicted RBP11.91□□□□□ -0.5
SND1-201ENST00000354725 CTDSPL2Q05D32 466 aa11.91□□□□□ -0.5
SND1-201ENST00000354725 PPP2R3AQ06190 1150 aa11.91□□□□□ -0.5
SND1-201ENST00000354725 CCDC40Q4G0X9 1142 aa11.91□□□□□ -0.5
SND1-201ENST00000354725 SPATA1Q5VX52 437 aa11.91□□□□□ -0.5
SND1-201ENST00000354725 C14orf80Q86SX3 495 aa11.91□□□□□ -0.5
SND1-201ENST00000354725 CCDC50Q8IVM0 306 aa11.91□□□□□ -0.5
SND1-201ENST00000354725 OXER1Q8TDS5 423 aa11.91□□□□□ -0.5
SND1-201ENST00000354725 FAM84BQ96KN1 310 aaPredicted RBP11.91□□□□□ -0.5
SND1-201ENST00000354725 PAPOLBQ9NRJ5 636 aaKnown RBP11.91□□□□□ -0.5
SND1-201ENST00000354725 SMNDC1O75940 238 aaKnown RBP eCLIP11.9□□□□□ -0.5
SND1-201ENST00000354725 TUBB2AQ13885 445 aa11.9□□□□□ -0.5
SND1-201ENST00000354725 AOC3Q16853 763 aa11.9□□□□□ -0.5
SND1-201ENST00000354725 FAM228AQ86W67 206 aa11.9□□□□□ -0.5
SND1-201ENST00000354725 TUBB2BQ9BVA1 445 aa11.9□□□□□ -0.5
SND1-201ENST00000354725 CSRNP2Q9H175 543 aa11.9□□□□□ -0.5
SND1-201ENST00000354725 UTP6Q9NYH9 597 aaKnown RBP11.9□□□□□ -0.5
SND1-201ENST00000354725 GGA1Q9UJY5 639 aa11.9□□□□□ -0.5
SND1-201ENST00000354725 ATAD5Q96QE3 1844 aa11.9□□□□□ -0.5
SND1-201ENST00000354725 HMGB1P1B2RPK0 211 aaPredicted RBP11.9□□□□□ -0.5
SND1-201ENST00000354725 POTECB2RU33 542 aa11.9□□□□□ -0.5
SND1-201ENST00000354725 RNF40O75150 1001 aa11.9□□□□□ -0.5
SND1-201ENST00000354725 CYP11B2P19099 503 aa11.9□□□□□ -0.5
SND1-201ENST00000354725 EIF4BP23588 611 aaKnown RBP11.9□□□□□ -0.5
SND1-201ENST00000354725 KIF11P52732 1056 aa11.9□□□□□ -0.5
SND1-201ENST00000354725 ADKP55263 362 aaKnown RBP11.9□□□□□ -0.5
SND1-201ENST00000354725 GPR162Q16538 588 aa11.9□□□□□ -0.5
SND1-201ENST00000354725 PTPN21Q16825 1174 aa11.9□□□□□ -0.5
SND1-201ENST00000354725 C4orf46Q504U0 113 aa11.9□□□□□ -0.5
SND1-201ENST00000354725 EARS2Q5JPH6 523 aaKnown RBP11.9□□□□□ -0.5
SND1-201ENST00000354725 MTHFD1LQ6UB35 978 aa11.9□□□□□ -0.5
SND1-201ENST00000354725 GOLGA1Q92805 767 aa11.9□□□□□ -0.5
SND1-201ENST00000354725 DHX58Q96C10 678 aa11.9□□□□□ -0.5
SND1-201ENST00000354725 DNAI2Q9GZS0 605 aa11.9□□□□□ -0.5
SND1-201ENST00000354725 MUC3BQ9H195 1237 aa11.9□□□□□ -0.5
SND1-201ENST00000354725 MFAP3LO75121 409 aa11.9□□□□□ -0.51
SND1-201ENST00000354725 MBD4O95243 580 aa11.9□□□□□ -0.51
SND1-201ENST00000354725 FERP16591 822 aa11.9□□□□□ -0.51
SND1-201ENST00000354725 NR5A1Q13285 461 aa11.9□□□□□ -0.51
SND1-201ENST00000354725 RTN1Q16799 776 aa11.9□□□□□ -0.51
SND1-201ENST00000354725 BZW1Q7L1Q6 419 aaKnown RBP11.9□□□□□ -0.51
SND1-201ENST00000354725 FANCBQ8NB91 859 aa11.9□□□□□ -0.51
SND1-201ENST00000354725 SUPT20HQ8NEM7 779 aa11.9□□□□□ -0.51
SND1-201ENST00000354725 MIPOL1Q8TD10 442 aa11.9□□□□□ -0.51
SND1-201ENST00000354725 AIDAQ96BJ3 306 aa11.9□□□□□ -0.51
SND1-201ENST00000354725 GSDMAQ96QA5 445 aa11.9□□□□□ -0.51
SND1-201ENST00000354725 GORASP1Q9BQQ3 440 aa11.9□□□□□ -0.51
SND1-201ENST00000354725 ZHX3Q9H4I2 956 aa11.9□□□□□ -0.51
SND1-201ENST00000354725 KCNQ5Q9NR82 932 aa11.9□□□□□ -0.51
SND1-201ENST00000354725 ZNF219Q9P2Y4 722 aaPredicted RBP11.9□□□□□ -0.51
SND1-201ENST00000354725 CORO1CQ9ULV4 474 aaPredicted RBP11.9□□□□□ -0.51
SND1-201ENST00000354725 TMEM98Q9Y2Y6 226 aa11.9□□□□□ -0.51
SND1-201ENST00000354725 LINC00854A0A1B0GVQ3 168 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 WNT7AO00755 349 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 TEX33O43247 280 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 SLC26A4O43511 780 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 FGFR1OPO95684 399 aaKnown RBP11.89□□□□□ -0.51
SND1-201ENST00000354725 MTF1Q14872 753 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 TSR1Q2NL82 804 aaKnown RBP11.89□□□□□ -0.51
SND1-201ENST00000354725 TSNAXIP1Q2TAA8 658 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 LCORLQ8N3X6 602 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 CCDC51Q96ER9 411 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 PAGE5Q96GU1 130 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 LIMA1Q9UHB6 759 aaKnown RBP11.89□□□□□ -0.51
SND1-201ENST00000354725 KCNJ14Q9UNX9 436 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 CEP131Q9UPN4 1083 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 PDS5AQ29RF7 1337 aaKnown RBP11.89□□□□□ -0.51
SND1-201ENST00000354725 ZNF541Q9H0D2 1346 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 IFIT3O14879 490 aaKnown RBP11.89□□□□□ -0.51
SND1-201ENST00000354725 MEFVO15553 781 aaPredicted RBP11.89□□□□□ -0.51
SND1-201ENST00000354725 ZNF189O75820 626 aaPredicted RBP11.89□□□□□ -0.51
SND1-201ENST00000354725 GYPCP04921 128 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 LDHCP07864 332 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 ARHGAP25P42331 645 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 IRAK1P51617 712 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 AMPD2Q01433 879 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 SLMAPQ14BN4 828 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 SPECC1Q5M775 1068 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 FAAH2Q6GMR7 532 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 UBE2Q1Q7Z7E8 422 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 FAM114A1Q8IWE2 563 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 GRAMD1CQ8IYS0 662 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 TRIM58Q8NG06 486 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 BCAS4Q8TDM0 211 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 GMLQ99445 158 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms