RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 MAPTP10636 758 aaKnown RBP4.11□□□□□ -1.75
RNF38-203ENST00000353739 FXR1P51114 621 aaKnown RBP eCLIP4.11□□□□□ -1.75
RNF38-203ENST00000353739 ERVK-24P63145 666 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 MYBPC2Q14324 1141 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 DOK7Q18PE1 504 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 SLC35G1Q2M3R5 365 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 ERCC6LQ2NKX8 1250 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 PAPD7Q5XG87 772 aaKnown RBP4.11□□□□□ -1.75
RNF38-203ENST00000353739 SMYD5Q6GMV2 418 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 AMIGO3Q86WK7 504 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 SLC35F6Q8N357 371 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 OGFOD1Q8N543 542 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 CERS5Q8N5B7 392 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 AGBL3Q8NEM8 1001 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 FAM151AQ8WW52 585 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 STAMQ92783 540 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 NOX5Q96PH1 765 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 MMTAG2Q9BU76 263 aaKnown RBP4.11□□□□□ -1.75
RNF38-203ENST00000353739 TTYH3Q9C0H2 523 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 DDX4Q9NQI0 724 aaKnown RBP4.11□□□□□ -1.75
RNF38-203ENST00000353739 FBXL5Q9UKA1 691 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 JRKLQ9Y4A0 524 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 HYOU1Q9Y4L1 999 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.11□□□□□ -1.75
RNF38-203ENST00000353739 ATAD5Q96QE3 1844 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 TTC26A0AVF1 554 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 TRIM49BA6NDI0 452 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 A6NNZ2 444 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 PP2D1A8MPX8 630 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 SLC37A4O43826 429 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 IDEP14735 1019 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 RPA1P27694 616 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 CBX1P83916 185 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 ARHGAP4P98171 946 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 EHHADHQ08426 723 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 TNFAIP1Q13829 316 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 TUBB8Q3ZCM7 444 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 CCDC181Q5TID7 509 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 WDR93Q6P2C0 686 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 RSBN1LQ6PCB5 846 aaPredicted RBP4.11□□□□□ -1.75
RNF38-203ENST00000353739 TRAPPC11Q7Z392 1133 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 ZNF572Q7Z3I7 529 aaPredicted RBP4.11□□□□□ -1.75
RNF38-203ENST00000353739 SYT2Q8N9I0 419 aaPredicted RBP4.11□□□□□ -1.75
RNF38-203ENST00000353739 IWS1Q96ST2 819 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 SLF1Q9BQI6 1058 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 DESI2Q9BSY9 194 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 TEKT3Q9BXF9 490 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 TYW1Q9NV66 732 aaKnown RBP4.11□□□□□ -1.75
RNF38-203ENST00000353739 CWC15Q9P013 229 aaKnown RBP4.11□□□□□ -1.75
RNF38-203ENST00000353739 RAB21Q9UL25 225 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 CTDP1Q9Y5B0 961 aaPredicted RBP4.11□□□□□ -1.75
RNF38-203ENST00000353739 GTPBP10A4D1E9 387 aaKnown RBP4.11□□□□□ -1.75
RNF38-203ENST00000353739 RBAK-RBAKDNI3L0D1 243 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 FAM13AO94988 1023 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 AFPP02771 609 aaKnown RBP4.11□□□□□ -1.75
RNF38-203ENST00000353739 CASP1P29466 404 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 PAFAH1B1P43034 410 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 SCNN1DP51172 638 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 PRELPP51888 382 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 RASA3Q14644 834 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 UBE2SQ16763 222 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 MIIPQ5JXC2 388 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 CC2D1AQ6P1N0 951 aaPredicted RBP4.11□□□□□ -1.75
RNF38-203ENST00000353739 KCTD1Q719H9 257 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 ZNF771Q7L3S4 317 aaPredicted RBP4.11□□□□□ -1.75
RNF38-203ENST00000353739 FAM83AQ86UY5 434 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 SYCE1Q8N0S2 351 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 KIAA0895Q8NCT3 520 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.11□□□□□ -1.75
RNF38-203ENST00000353739 PURBQ96QR8 312 aaKnown RBP4.11□□□□□ -1.75
RNF38-203ENST00000353739 MKNK1Q9BUB5 465 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 IFIH1Q9BYX4 1025 aaKnown RBP4.11□□□□□ -1.75
RNF38-203ENST00000353739 RANBP17Q9H2T7 1088 aaKnown RBP4.11□□□□□ -1.75
RNF38-203ENST00000353739 SEMA6BQ9H3T3 888 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 SLC39A2Q9NP94 309 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 MED4Q9NPJ6 270 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 DIS3Q9Y2L1 958 aaKnown RBP4.11□□□□□ -1.75
RNF38-203ENST00000353739 PCDHA13Q9Y5I0 950 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 TRAF5O00463 557 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 PPIP5K2O43314 1243 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 AKR1B10O60218 316 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 USP14P54578 494 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 APBA1Q02410 837 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 EVX2Q03828 476 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 ENPEPQ07075 957 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 GOLGA8FQ08AF8 430 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 GOLGA8DPQ0D2H9 430 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 PPP2R5CQ13362 524 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 DLGAP5Q15398 846 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 NCAPH2Q6IBW4 605 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 XRRA1Q6P2D8 792 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 ACRBPQ8NEB7 543 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 FAM81BQ96LP2 452 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 WDR24Q96S15 920 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 PLCB1Q9NQ66 1216 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 EMILIN3Q9NT22 766 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 INTUQ9ULD6 942 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 GUCA1BQ9UMX6 200 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 PLAGL2Q9UPG8 496 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 KIAA1024Q9UPX6 916 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms