RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 TMEM62Q0P6H9 643 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 TRIM42Q8IWZ5 723 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 LY9Q9HBG7 655 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 SLC12A7Q9Y666 1083 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 SMIM23A6NLE4 172 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 PJA2O43164 708 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 FLOT1O75955 427 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 CALB2P22676 271 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 ASRGL1Q7L266 308 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 TMC3Q7Z5M5 1100 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 TRIM22Q8IYM9 498 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 NDNQ99608 321 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 ZWILCHQ9H900 591 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.48□□□□□ -0.09
IFT88-202ENST00000351808 GALNT8Q9NY28 637 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 FMN2Q9NZ56 1722 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 MYH2Q9UKX2 1941 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 USP6P35125 1406 aa14.47□□□□□ -0.09
IFT88-202ENST00000351808 GPAA1O43292 621 aa14.47□□□□□ -0.09
IFT88-202ENST00000351808 LCA5LO95447 670 aa14.47□□□□□ -0.09
IFT88-202ENST00000351808 MTIF2P46199 727 aaKnown RBP14.47□□□□□ -0.09
IFT88-202ENST00000351808 ENOX2Q16206 610 aaKnown RBP14.47□□□□□ -0.09
IFT88-202ENST00000351808 APBB1IPQ7Z5R6 666 aaPredicted RBP14.47□□□□□ -0.09
IFT88-202ENST00000351808 PPP1R12CQ9BZL4 782 aa14.47□□□□□ -0.09
IFT88-202ENST00000351808 KRT23Q9C075 422 aa14.47□□□□□ -0.09
IFT88-202ENST00000351808 VCXQ9H320 206 aa14.47□□□□□ -0.09
IFT88-202ENST00000351808 RNPEPL1Q9HAU8 725 aa14.47□□□□□ -0.09
IFT88-202ENST00000351808 FAM207AQ9NSI2 230 aaPredicted RBP14.47□□□□□ -0.09
IFT88-202ENST00000351808 IQSEC3Q9UPP2 1182 aaPredicted RBP14.47□□□□□ -0.09
IFT88-202ENST00000351808 PHF24Q9UPV7 400 aa14.47□□□□□ -0.09
IFT88-202ENST00000351808 MYL6BP14649 208 aa14.47□□□□□ -0.09
IFT88-202ENST00000351808 GIGYF2Q6Y7W6 1299 aaKnown RBP14.47□□□□□ -0.09
IFT88-202ENST00000351808 CSGALNACT2Q8N6G5 542 aa14.47□□□□□ -0.09
IFT88-202ENST00000351808 EIF1ADQ8N9N8 165 aaKnown RBP14.47□□□□□ -0.09
IFT88-202ENST00000351808 IFT43Q96FT9 208 aa14.47□□□□□ -0.09
IFT88-202ENST00000351808 NOC4LQ9BVI4 516 aaKnown RBP14.47□□□□□ -0.09
IFT88-202ENST00000351808 AP1M1Q9BXS5 423 aa14.47□□□□□ -0.09
IFT88-202ENST00000351808 NSRP1Q9H0G5 558 aaKnown RBP14.47□□□□□ -0.09
IFT88-202ENST00000351808 RMND1Q9NWS8 449 aa14.47□□□□□ -0.09
IFT88-202ENST00000351808 ATP8A1Q9Y2Q0 1164 aa14.47□□□□□ -0.09
IFT88-202ENST00000351808 USP15Q9Y4E8 981 aaPredicted RBP14.47□□□□□ -0.09
IFT88-202ENST00000351808 ITGA6P23229 1130 aa14.46□□□□□ -0.09
IFT88-202ENST00000351808 MMP13P45452 471 aa14.46□□□□□ -0.09
IFT88-202ENST00000351808 KIAA0753Q2KHM9 967 aa14.46□□□□□ -0.09
IFT88-202ENST00000351808 PABPC1LQ4VXU2 614 aaKnown RBP14.46□□□□□ -0.09
IFT88-202ENST00000351808 CCDC178Q5BJE1 867 aa14.46□□□□□ -0.09
IFT88-202ENST00000351808 RNF10Q8N5U6 811 aaKnown RBP14.46□□□□□ -0.09
IFT88-202ENST00000351808 FERMT2Q96AC1 680 aa14.46□□□□□ -0.09
IFT88-202ENST00000351808 OPTNQ96CV9 577 aa14.46□□□□□ -0.09
IFT88-202ENST00000351808 ABCF2Q9UG63 623 aa14.46□□□□□ -0.09
IFT88-202ENST00000351808 METP08581 1390 aa14.46□□□□□ -0.09
IFT88-202ENST00000351808 RIMBP3CA6NJZ7 1639 aa14.46□□□□□ -0.1
IFT88-202ENST00000351808 RIMBP3BA6NNM3 1639 aa14.46□□□□□ -0.1
IFT88-202ENST00000351808 RIMBP3Q9UFD9 1639 aa14.46□□□□□ -0.1
IFT88-202ENST00000351808 H0Y3Z8 333 aa14.46□□□□□ -0.1
IFT88-202ENST00000351808 TPBGLP0DKB5 382 aa14.46□□□□□ -0.1
IFT88-202ENST00000351808 HOXC9P31274 260 aa14.46□□□□□ -0.1
IFT88-202ENST00000351808 IFI35P80217 286 aaPredicted RBP14.46□□□□□ -0.1
IFT88-202ENST00000351808 AMOTQ4VCS5 1084 aa14.46□□□□□ -0.1
IFT88-202ENST00000351808 FITM2Q8N6M3 262 aa14.46□□□□□ -0.1
IFT88-202ENST00000351808 UTP4Q969X6 686 aaKnown RBP14.46□□□□□ -0.1
IFT88-202ENST00000351808 DDX23Q9BUQ8 820 aaKnown RBP14.46□□□□□ -0.1
IFT88-202ENST00000351808 DDX47Q9H0S4 455 aaKnown RBP14.46□□□□□ -0.1
IFT88-202ENST00000351808 TMEM59LQ9UK28 342 aa14.46□□□□□ -0.1
IFT88-202ENST00000351808 SOS2Q07890 1332 aaPredicted RBP14.45□□□□□ -0.1
IFT88-202ENST00000351808 A0A1W2PQJ5 194 aa14.45□□□□□ -0.1
IFT88-202ENST00000351808 HNRNPH3P31942 346 aaKnown RBP14.45□□□□□ -0.1
IFT88-202ENST00000351808 LMBR1LQ6UX01 489 aa14.45□□□□□ -0.1
IFT88-202ENST00000351808 RRAGAQ7L523 313 aa14.45□□□□□ -0.1
IFT88-202ENST00000351808 STAG2Q8N3U4 1231 aa14.45□□□□□ -0.1
IFT88-202ENST00000351808 DYDC1Q8WWB3 177 aa14.45□□□□□ -0.1
IFT88-202ENST00000351808 DNAJC9Q8WXX5 260 aa14.45□□□□□ -0.1
IFT88-202ENST00000351808 TMEM87BQ96K49 555 aa14.45□□□□□ -0.1
IFT88-202ENST00000351808 CNOT6LQ96LI5 555 aaKnown RBP14.45□□□□□ -0.1
IFT88-202ENST00000351808 DDX21Q9NR30 783 aaKnown RBP eCLIP14.45□□□□□ -0.1
IFT88-202ENST00000351808 PDLIM1O00151 329 aa14.45□□□□□ -0.1
IFT88-202ENST00000351808 PEX11AO75192 247 aa14.45□□□□□ -0.1
IFT88-202ENST00000351808 WFS1O76024 890 aa14.45□□□□□ -0.1
IFT88-202ENST00000351808 OATP04181 439 aa14.45□□□□□ -0.1
IFT88-202ENST00000351808 TTI2Q6NXR4 508 aa14.45□□□□□ -0.1
IFT88-202ENST00000351808 ATG9AQ7Z3C6 839 aa14.45□□□□□ -0.1
IFT88-202ENST00000351808 STK32AQ8WU08 396 aa14.45□□□□□ -0.1
IFT88-202ENST00000351808 DUSP9Q99956 384 aaKnown RBP14.45□□□□□ -0.1
IFT88-202ENST00000351808 YIPF2Q9BWQ6 316 aa14.45□□□□□ -0.1
IFT88-202ENST00000351808 DPH5Q9H2P9 285 aa14.45□□□□□ -0.1
IFT88-202ENST00000351808 ETNK1Q9HBU6 452 aa14.45□□□□□ -0.1
IFT88-202ENST00000351808 FGFR1OP2Q9NVK5 253 aa14.45□□□□□ -0.1
IFT88-202ENST00000351808 NEO1Q92859 1461 aa14.45□□□□□ -0.1
IFT88-202ENST00000351808 LRRC53A6NM62 1247 aa14.44□□□□□ -0.1
IFT88-202ENST00000351808 KCNK3O14649 394 aa14.44□□□□□ -0.1
IFT88-202ENST00000351808 PDE6CP51160 858 aa14.44□□□□□ -0.1
IFT88-202ENST00000351808 PTGDRQ13258 359 aa14.44□□□□□ -0.1
IFT88-202ENST00000351808 PTPROQ16827 1216 aa14.44□□□□□ -0.1
IFT88-202ENST00000351808 MIIPQ5JXC2 388 aa14.44□□□□□ -0.1
IFT88-202ENST00000351808 MEI1Q5TIA1 1274 aa14.44□□□□□ -0.1
IFT88-202ENST00000351808 SGMS1Q86VZ5 419 aa14.44□□□□□ -0.1
IFT88-202ENST00000351808 GBP7Q8N8V2 638 aaPredicted RBP14.44□□□□□ -0.1
IFT88-202ENST00000351808 TRAPPC9Q96Q05 1148 aa14.44□□□□□ -0.1
IFT88-202ENST00000351808 PSMA7O14818 248 aa14.44□□□□□ -0.1
IFT88-202ENST00000351808 SUN1O94901 812 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms