RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3A, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 POLR3GO15318 223 aaPredicted RBP24.5■■□□□ 1.51
UPF3A-201ENST00000351487 SSBP05455 408 aaKnown RBP eCLIP24.5■■□□□ 1.51
UPF3A-201ENST00000351487 EIF4A3P38919 411 aaKnown RBP24.5■■□□□ 1.51
UPF3A-201ENST00000351487 SPIRE1Q08AE8 756 aa24.5■■□□□ 1.51
UPF3A-201ENST00000351487 KCNMA1Q12791 1236 aa24.5■■□□□ 1.51
UPF3A-201ENST00000351487 HAUS3Q68CZ6 603 aa24.5■■□□□ 1.51
UPF3A-201ENST00000351487 GPBP1Q86WP2 473 aa24.5■■□□□ 1.51
UPF3A-201ENST00000351487 NEK11Q8NG66 645 aa24.5■■□□□ 1.51
UPF3A-201ENST00000351487 ETNPPLQ8TBG4 499 aa24.5■■□□□ 1.51
UPF3A-201ENST00000351487 GMCL1Q96IK5 515 aa24.5■■□□□ 1.51
UPF3A-201ENST00000351487 TRAF5O00463 557 aa24.49■■□□□ 1.51
UPF3A-201ENST00000351487 SRGAP2O75044 1071 aa24.49■■□□□ 1.51
UPF3A-201ENST00000351487 ARHGAP4P98171 946 aa24.49■■□□□ 1.51
UPF3A-201ENST00000351487 MAPK8IP2Q13387 824 aaPredicted RBP24.49■■□□□ 1.51
UPF3A-201ENST00000351487 RRAGAQ7L523 313 aa24.49■■□□□ 1.51
UPF3A-201ENST00000351487 AMNQ9BXJ7 453 aa24.49■■□□□ 1.51
UPF3A-201ENST00000351487 FGFBP2Q9BYJ0 223 aa24.49■■□□□ 1.51
UPF3A-201ENST00000351487 SSU72P8A0A1W2PR75 194 aa24.49■■□□□ 1.51
UPF3A-201ENST00000351487 ASTE1Q2TB18 679 aaPredicted RBP24.49■■□□□ 1.51
UPF3A-201ENST00000351487 KCTD10Q9H3F6 313 aa24.49■■□□□ 1.51
UPF3A-201ENST00000351487 SERPINA10Q9UK55 444 aa24.49■■□□□ 1.51
UPF3A-201ENST00000351487 JRKLQ9Y4A0 524 aa24.49■■□□□ 1.51
UPF3A-201ENST00000351487 ATRNL1Q5VV63 1379 aa24.49■■□□□ 1.51
UPF3A-201ENST00000351487 TARSL2A2RTX5 802 aaKnown RBP24.48■■□□□ 1.51
UPF3A-201ENST00000351487 RAD21O60216 631 aa24.48■■□□□ 1.51
UPF3A-201ENST00000351487 MED24O75448 989 aa24.48■■□□□ 1.51
UPF3A-201ENST00000351487 MMP14P50281 582 aa24.48■■□□□ 1.51
UPF3A-201ENST00000351487 SLC12A3P55017 1021 aa24.48■■□□□ 1.51
UPF3A-201ENST00000351487 Q4G0T1 1027 aa24.48■■□□□ 1.51
UPF3A-201ENST00000351487 CCDC40Q4G0X9 1142 aa24.48■■□□□ 1.51
UPF3A-201ENST00000351487 FLAD1Q8NFF5 587 aa24.48■■□□□ 1.51
UPF3A-201ENST00000351487 TRIM34Q9BYJ4 488 aa24.48■■□□□ 1.51
UPF3A-201ENST00000351487 NUCKS1Q9H1E3 243 aaKnown RBP24.48■■□□□ 1.51
UPF3A-201ENST00000351487 DEF6Q9H4E7 631 aa24.48■■□□□ 1.51
UPF3A-201ENST00000351487 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.48■■□□□ 1.51
UPF3A-201ENST00000351487 CEP72Q9P209 647 aa24.48■■□□□ 1.51
UPF3A-201ENST00000351487 F5H6K3 240 aa24.47■■□□□ 1.51
UPF3A-201ENST00000351487 H3BQF6 201 aa24.47■■□□□ 1.51
UPF3A-201ENST00000351487 PJA2O43164 708 aa24.47■■□□□ 1.51
UPF3A-201ENST00000351487 ECE2O60344 883 aa24.47■■□□□ 1.51
UPF3A-201ENST00000351487 MCM3P25205 808 aa24.47■■□□□ 1.51
UPF3A-201ENST00000351487 KLRC3Q07444 240 aa24.47■■□□□ 1.51
UPF3A-201ENST00000351487 GPS2Q13227 327 aa24.47■■□□□ 1.51
UPF3A-201ENST00000351487 PPP4R3CPQ6ZMV5 832 aa24.47■■□□□ 1.51
UPF3A-201ENST00000351487 TRIM59Q8IWR1 403 aa24.47■■□□□ 1.51
UPF3A-201ENST00000351487 SCFD1Q8WVM8 642 aa24.47■■□□□ 1.51
UPF3A-201ENST00000351487 SYN2Q92777 582 aaPredicted RBP24.47■■□□□ 1.51
UPF3A-201ENST00000351487 P2RX7Q99572 595 aaKnown RBP24.47■■□□□ 1.51
UPF3A-201ENST00000351487 TANGO6Q9C0B7 1094 aa24.47■■□□□ 1.51
UPF3A-201ENST00000351487 SLX4Q8IY92 1834 aa24.47■■□□□ 1.51
UPF3A-201ENST00000351487 MYH10P35580 1976 aa24.47■■□□□ 1.51
UPF3A-201ENST00000351487 COL2A1P02458 1487 aaPredicted RBP24.47■■□□□ 1.51
UPF3A-201ENST00000351487 AKR1B10O60218 316 aa24.47■■□□□ 1.51
UPF3A-201ENST00000351487 TACC1O75410 805 aa24.47■■□□□ 1.51
UPF3A-201ENST00000351487 CAPN6Q9Y6Q1 641 aa24.47■■□□□ 1.51
UPF3A-201ENST00000351487 PLSCR1O15162 318 aa24.46■■□□□ 1.51
UPF3A-201ENST00000351487 EIF3JO75822 258 aaKnown RBP24.46■■□□□ 1.51
UPF3A-201ENST00000351487 FOSP01100 380 aaPredicted RBP24.46■■□□□ 1.51
UPF3A-201ENST00000351487 SREBF1P36956 1147 aa24.46■■□□□ 1.51
UPF3A-201ENST00000351487 RBM5P52756 815 aaKnown RBP eCLIP24.46■■□□□ 1.51
UPF3A-201ENST00000351487 EDRF1Q3B7T1 1238 aa24.46■■□□□ 1.51
UPF3A-201ENST00000351487 HERC4Q5GLZ8 1057 aaPredicted RBP24.46■■□□□ 1.51
UPF3A-201ENST00000351487 CACNA2D4Q7Z3S7 1137 aa24.46■■□□□ 1.51
UPF3A-201ENST00000351487 ZNF622Q969S3 477 aaKnown RBP eCLIP24.46■■□□□ 1.512e-6■■■□□ 15.3
UPF3A-201ENST00000351487 LENG9Q96B70 501 aa24.46■■□□□ 1.51
UPF3A-201ENST00000351487 ZCCHC17Q9NP64 241 aaKnown RBP24.46■■□□□ 1.51
UPF3A-201ENST00000351487 SNX12Q9UMY4 172 aa24.46■■□□□ 1.51
UPF3A-201ENST00000351487 NDUFB10O96000 172 aa24.46■■□□□ 1.51
UPF3A-201ENST00000351487 PRLRP16471 622 aa24.46■■□□□ 1.51
UPF3A-201ENST00000351487 STAT3P40763 770 aa24.46■■□□□ 1.51
UPF3A-201ENST00000351487 CASP8Q14790 479 aa24.46■■□□□ 1.51
UPF3A-201ENST00000351487 ABCB5Q2M3G0 1257 aa24.46■■□□□ 1.51
UPF3A-201ENST00000351487 ARSHQ5FYA8 562 aa24.46■■□□□ 1.51
UPF3A-201ENST00000351487 HGSNATQ68CP4 663 aa24.46■■□□□ 1.51
UPF3A-201ENST00000351487 CCDC155Q8N6L0 562 aa24.46■■□□□ 1.51
UPF3A-201ENST00000351487 CAPZA3Q96KX2 299 aa24.46■■□□□ 1.51
UPF3A-201ENST00000351487 SUGCTQ9HAC7 445 aa24.46■■□□□ 1.51
UPF3A-201ENST00000351487 TBC1D7Q9P0N9 293 aa24.46■■□□□ 1.51
UPF3A-201ENST00000351487 RBAK-RBAKDNI3L0D1 243 aa24.45■■□□□ 1.5
UPF3A-201ENST00000351487 FBXO11Q86XK2 927 aa24.45■■□□□ 1.5
UPF3A-201ENST00000351487 ERMNQ8TAM6 284 aa24.45■■□□□ 1.5
UPF3A-201ENST00000351487 SMCR8Q8TEV9 937 aaPredicted RBP24.45■■□□□ 1.5
UPF3A-201ENST00000351487 EMILIN3Q9NT22 766 aa24.45■■□□□ 1.5
UPF3A-201ENST00000351487 FAM184BQ9ULE4 1060 aa24.45■■□□□ 1.5
UPF3A-201ENST00000351487 STK24Q9Y6E0 443 aa24.45■■□□□ 1.5
UPF3A-201ENST00000351487 NPHP3-ACAD11A0A0J9YXS1 232 aa24.45■■□□□ 1.5
UPF3A-201ENST00000351487 POTEFA5A3E0 1075 aa24.45■■□□□ 1.5
UPF3A-201ENST00000351487 NOL4O94818 638 aa24.45■■□□□ 1.5
UPF3A-201ENST00000351487 POTEIP0CG38 1075 aa24.45■■□□□ 1.5
UPF3A-201ENST00000351487 ERCC3P19447 782 aa24.45■■□□□ 1.5
UPF3A-201ENST00000351487 SYDE2Q5VT97 1194 aa24.45■■□□□ 1.5
UPF3A-201ENST00000351487 IQCEQ6IPM2 695 aa24.45■■□□□ 1.5
UPF3A-201ENST00000351487 STYK1Q6J9G0 422 aa24.45■■□□□ 1.5
UPF3A-201ENST00000351487 POTEGQ6S5H5 508 aa24.45■■□□□ 1.5
UPF3A-201ENST00000351487 POTEEQ6S8J3 1075 aa24.45■■□□□ 1.5
UPF3A-201ENST00000351487 ZNF572Q7Z3I7 529 aaPredicted RBP24.45■■□□□ 1.5
UPF3A-201ENST00000351487 CATSPER3Q86XQ3 398 aa24.45■■□□□ 1.5
UPF3A-201ENST00000351487 TXLNBQ8N3L3 684 aa24.45■■□□□ 1.5
UPF3A-201ENST00000351487 PDE11AQ9HCR9 933 aa24.45■■□□□ 1.5
UPF3A-201ENST00000351487 JADE2Q9NQC1 790 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms