RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 POTEIP0CG38 1075 aa18.54■□□□□ 0.56
SAMM50-201ENST00000350028 POTEGQ6S5H5 508 aa18.54■□□□□ 0.56
SAMM50-201ENST00000350028 POTEEQ6S8J3 1075 aa18.54■□□□□ 0.56
SAMM50-201ENST00000350028 LDHDQ86WU2 507 aa18.54■□□□□ 0.56
SAMM50-201ENST00000350028 TBC1D5Q92609 795 aa18.54■□□□□ 0.56
SAMM50-201ENST00000350028 FEZ1Q99689 392 aa18.54■□□□□ 0.56
SAMM50-201ENST00000350028 SYT17Q9BSW7 474 aa18.54■□□□□ 0.56
SAMM50-201ENST00000350028 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.54■□□□□ 0.56
SAMM50-201ENST00000350028 ATAD5Q96QE3 1844 aa18.53■□□□□ 0.56
SAMM50-201ENST00000350028 SMCHD1A6NHR9 2005 aa18.53■□□□□ 0.56
SAMM50-201ENST00000350028 A0A1W2PQJ5 194 aa18.53■□□□□ 0.56
SAMM50-201ENST00000350028 URI1O94763 535 aaPredicted RBP18.53■□□□□ 0.56
SAMM50-201ENST00000350028 ZBED6P86452 979 aa18.53■□□□□ 0.56
SAMM50-201ENST00000350028 FKBP3Q00688 224 aaKnown RBP18.53■□□□□ 0.56
SAMM50-201ENST00000350028 ZCWPW2Q504Y3 356 aa18.53■□□□□ 0.56
SAMM50-201ENST00000350028 ARSHQ5FYA8 562 aa18.53■□□□□ 0.56
SAMM50-201ENST00000350028 HERC4Q5GLZ8 1057 aaPredicted RBP18.53■□□□□ 0.56
SAMM50-201ENST00000350028 LRRC55Q6ZSA7 311 aa18.53■□□□□ 0.56
SAMM50-201ENST00000350028 EEF2KMTQ96G04 330 aa18.53■□□□□ 0.56
SAMM50-201ENST00000350028 CEP63Q96MT8 703 aa18.53■□□□□ 0.56
SAMM50-201ENST00000350028 GLIS2Q9BZE0 524 aaPredicted RBP18.53■□□□□ 0.56
SAMM50-201ENST00000350028 TTYH3Q9C0H2 523 aa18.53■□□□□ 0.56
SAMM50-201ENST00000350028 RABGAP1Q9Y3P9 1069 aa18.53■□□□□ 0.56
SAMM50-201ENST00000350028 SHTN1A0MZ66 631 aa18.52■□□□□ 0.56
SAMM50-201ENST00000350028 WDR46O15213 610 aaKnown RBP18.52■□□□□ 0.56
SAMM50-201ENST00000350028 TRIM21P19474 475 aaKnown RBP18.52■□□□□ 0.56
SAMM50-201ENST00000350028 CYP2W1Q8TAV3 490 aa18.52■□□□□ 0.56
SAMM50-201ENST00000350028 LPAR1Q92633 364 aa18.52■□□□□ 0.56
SAMM50-201ENST00000350028 PCMTD1Q96MG8 357 aaPredicted RBP18.52■□□□□ 0.56
SAMM50-201ENST00000350028 TEPSINQ96N21 525 aa18.52■□□□□ 0.56
SAMM50-201ENST00000350028 EIF2AK1Q9BQI3 630 aaKnown RBP18.52■□□□□ 0.56
SAMM50-201ENST00000350028 ZNF341Q9BYN7 854 aa18.52■□□□□ 0.56
SAMM50-201ENST00000350028 NDST4Q9H3R1 872 aa18.52■□□□□ 0.56
SAMM50-201ENST00000350028 ZNHIT6Q9NWK9 470 aaKnown RBP18.52■□□□□ 0.56
SAMM50-201ENST00000350028 BCS1LQ9Y276 419 aa18.52■□□□□ 0.56
SAMM50-201ENST00000350028 LTBP3Q9NS15 1303 aa18.52■□□□□ 0.56
SAMM50-201ENST00000350028 RASSF10A6NK89 507 aa18.52■□□□□ 0.55
SAMM50-201ENST00000350028 KIF5CO60282 957 aa18.52■□□□□ 0.55
SAMM50-201ENST00000350028 GIT2Q14161 759 aa18.52■□□□□ 0.55
SAMM50-201ENST00000350028 PDCL2Q8N4E4 241 aa18.52■□□□□ 0.55
SAMM50-201ENST00000350028 GLIS3Q8NEA6 775 aa18.52■□□□□ 0.55
SAMM50-201ENST00000350028 ZNF397Q8NF99 534 aaPredicted RBP18.52■□□□□ 0.55
SAMM50-201ENST00000350028 SLC5A5Q92911 643 aa18.52■□□□□ 0.55
SAMM50-201ENST00000350028 WDR24Q96S15 920 aa18.52■□□□□ 0.55
SAMM50-201ENST00000350028 TUFT1Q9NNX1 390 aa18.52■□□□□ 0.55
SAMM50-201ENST00000350028 FBXO28Q9NVF7 368 aa18.52■□□□□ 0.55
SAMM50-201ENST00000350028 EPN1Q9Y6I3 576 aaPredicted RBP18.52■□□□□ 0.55
SAMM50-201ENST00000350028 NPHP3-ACAD11A0A0J9YXS1 232 aa18.51■□□□□ 0.55
SAMM50-201ENST00000350028 FANCGO15287 622 aa18.51■□□□□ 0.55
SAMM50-201ENST00000350028 EYA4O95677 639 aa18.51■□□□□ 0.55
SAMM50-201ENST00000350028 GNA14O95837 355 aa18.51■□□□□ 0.55
SAMM50-201ENST00000350028 ICAM1P05362 532 aa18.51■□□□□ 0.55
SAMM50-201ENST00000350028 INPP5BP32019 993 aa18.51■□□□□ 0.55
SAMM50-201ENST00000350028 PSMC6P62333 389 aa18.51■□□□□ 0.55
SAMM50-201ENST00000350028 PPP2R5CQ13362 524 aa18.51■□□□□ 0.55
SAMM50-201ENST00000350028 MEA1Q16626 185 aa18.51■□□□□ 0.55
SAMM50-201ENST00000350028 OTOP1Q7RTM1 612 aa18.51■□□□□ 0.55
SAMM50-201ENST00000350028 CCDC84Q86UT8 332 aaPredicted RBP18.51■□□□□ 0.55
SAMM50-201ENST00000350028 PRPF38AQ8NAV1 312 aaKnown RBP18.51■□□□□ 0.55
SAMM50-201ENST00000350028 CHP1Q99653 195 aa18.51■□□□□ 0.55
SAMM50-201ENST00000350028 WDR18Q9BV38 432 aa18.51■□□□□ 0.55
SAMM50-201ENST00000350028 KIAA1683Q9H0B3 1180 aa18.51■□□□□ 0.55
SAMM50-201ENST00000350028 LZTFL1Q9NQ48 299 aa18.51■□□□□ 0.55
SAMM50-201ENST00000350028 EMILIN3Q9NT22 766 aa18.51■□□□□ 0.55
SAMM50-201ENST00000350028 CGNQ9P2M7 1197 aaKnown RBP18.51■□□□□ 0.55
SAMM50-201ENST00000350028 TRAF5O00463 557 aa18.5■□□□□ 0.55
SAMM50-201ENST00000350028 CTNND1O60716 968 aaKnown RBP18.5■□□□□ 0.55
SAMM50-201ENST00000350028 PSMD10O75832 226 aa18.5■□□□□ 0.55
SAMM50-201ENST00000350028 NDUFA10O95299 355 aa18.5■□□□□ 0.55
SAMM50-201ENST00000350028 MUTP22033 750 aa18.5■□□□□ 0.55
SAMM50-201ENST00000350028 MAP3K9P80192 1104 aa18.5■□□□□ 0.55
SAMM50-201ENST00000350028 PABPC4Q13310 644 aaKnown RBP eCLIP18.5■□□□□ 0.553e-13■□□□□ 9.3
SAMM50-201ENST00000350028 NAA30Q147X3 362 aaPredicted RBP18.5■□□□□ 0.55
SAMM50-201ENST00000350028 ARHGAP29Q52LW3 1261 aa18.5■□□□□ 0.55
SAMM50-201ENST00000350028 CEP55Q53EZ4 464 aa18.5■□□□□ 0.55
SAMM50-201ENST00000350028 LRCH2Q5VUJ6 765 aa18.5■□□□□ 0.55
SAMM50-201ENST00000350028 PPP4R3CPQ6ZMV5 832 aa18.5■□□□□ 0.55
SAMM50-201ENST00000350028 ACRBPQ8NEB7 543 aa18.5■□□□□ 0.55
SAMM50-201ENST00000350028 COL4A3BPQ9Y5P4 624 aa18.5■□□□□ 0.55
SAMM50-201ENST00000350028 EML1O00423 815 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 MEIS1O00470 390 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 HSD17B4P51659 736 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 PRELPP51888 382 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 CDK17Q00537 523 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 SETQ01105 290 aaPredicted RBP18.49■□□□□ 0.55
SAMM50-201ENST00000350028 WDR59Q6PJI9 974 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 SAMD1Q6SPF0 538 aaPredicted RBP18.49■□□□□ 0.55
SAMM50-201ENST00000350028 HSD17B14Q9BPX1 270 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 SLF1Q9BQI6 1058 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 TBC1D7Q9P0N9 293 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 MYO1AQ9UBC5 1043 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 CCPG1Q9ULG6 757 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 SIK3Q9Y2K2 1263 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 CYLC1P35663 651 aaPredicted RBP18.49■□□□□ 0.55
SAMM50-201ENST00000350028 KLK7P49862 253 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 GMPSP49915 693 aaPredicted RBP18.49■□□□□ 0.55
SAMM50-201ENST00000350028 CACNB1Q02641 598 aaPredicted RBP18.49■□□□□ 0.55
SAMM50-201ENST00000350028 EDRF1Q3B7T1 1238 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 MCF2L2Q86YR7 1114 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 ZC3H3Q8IXZ2 948 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms