RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 GREB1LQ9C091 1923 aaPredicted RBP17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 MACROD2A1Z1Q3 448 aa17.1■□□□□ 0.33
TNFSF13-202ENST00000349228 FRMD3A2A2Y4 597 aa17.1■□□□□ 0.33
TNFSF13-202ENST00000349228 RBAK-RBAKDNI3L0D1 243 aa17.1■□□□□ 0.33
TNFSF13-202ENST00000349228 TFRCP02786 760 aaKnown RBP17.1■□□□□ 0.33
TNFSF13-202ENST00000349228 SCNN1DP51172 638 aa17.1■□□□□ 0.33
TNFSF13-202ENST00000349228 ASTE1Q2TB18 679 aaPredicted RBP17.1■□□□□ 0.33
TNFSF13-202ENST00000349228 CERKLQ49MI3 558 aaPredicted RBP17.1■□□□□ 0.33
TNFSF13-202ENST00000349228 SLC9C1Q4G0N8 1177 aa17.1■□□□□ 0.33
TNFSF13-202ENST00000349228 SLFN13Q68D06 897 aa17.1■□□□□ 0.33
TNFSF13-202ENST00000349228 ANO3Q9BYT9 981 aa17.1■□□□□ 0.33
TNFSF13-202ENST00000349228 TANGO6Q9C0B7 1094 aa17.1■□□□□ 0.33
TNFSF13-202ENST00000349228 ZCCHC17Q9NP64 241 aaKnown RBP17.1■□□□□ 0.33
TNFSF13-202ENST00000349228 ADAM21Q9UKJ8 722 aa17.1■□□□□ 0.33
TNFSF13-202ENST00000349228 KIAA1024Q9UPX6 916 aa17.1■□□□□ 0.33
TNFSF13-202ENST00000349228 PCDHA2Q9Y5H9 948 aa17.1■□□□□ 0.33
TNFSF13-202ENST00000349228 H3BQF6 201 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 SERPING1P05155 500 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 LRRC41Q15345 812 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 DOK7Q18PE1 504 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 Q4G0T1 1027 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 GPBP1Q86WP2 473 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 MASTLQ96GX5 879 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 FAM20AQ96MK3 541 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 TRIM34Q9BYJ4 488 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 RNF14Q9UBS8 474 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 SYNPO2Q9UMS6 1093 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 EPHB6O15197 1021 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 EEF2P13639 858 aaKnown RBP17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 AARSP49588 968 aaKnown RBP eCLIP17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 KCNMA1Q12791 1236 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 TRAF1Q13077 416 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 CDC37Q16543 378 aaPredicted RBP17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 HERC4Q5GLZ8 1057 aaPredicted RBP17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 STRIP1Q5VSL9 837 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 SFMBT2Q5VUG0 894 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 TATDN1Q6P1N9 297 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 TMEM179Q6ZVK1 233 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 TRIM59Q8IWR1 403 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 GMCL1P1Q8NEA9 526 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 AMNQ9BXJ7 453 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 TFR2Q9UP52 801 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 HYOU1Q9Y4L1 999 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 DUSP10Q9Y6W6 482 aa17.09■□□□□ 0.33
TNFSF13-202ENST00000349228 SRGAP2O75044 1071 aa17.08■□□□□ 0.33
TNFSF13-202ENST00000349228 SSBP05455 408 aaKnown RBP eCLIP17.08■□□□□ 0.33
TNFSF13-202ENST00000349228 PLEKP08567 350 aaPredicted RBP17.08■□□□□ 0.33
TNFSF13-202ENST00000349228 CYP11B2P19099 503 aa17.08■□□□□ 0.33
TNFSF13-202ENST00000349228 MMP14P50281 582 aa17.08■□□□□ 0.33
TNFSF13-202ENST00000349228 KRT26Q7Z3Y9 468 aa17.08■□□□□ 0.33
TNFSF13-202ENST00000349228 CRYGNQ8WXF5 182 aa17.08■□□□□ 0.33
TNFSF13-202ENST00000349228 GMCL1Q96IK5 515 aa17.08■□□□□ 0.33
TNFSF13-202ENST00000349228 NOX5Q96PH1 765 aa17.08■□□□□ 0.33
TNFSF13-202ENST00000349228 EMILIN3Q9NT22 766 aa17.08■□□□□ 0.33
TNFSF13-202ENST00000349228 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.08■□□□□ 0.33
TNFSF13-202ENST00000349228 CETN3O15182 167 aa17.08■□□□□ 0.32
TNFSF13-202ENST00000349228 NKRFO15226 690 aaKnown RBP eCLIP17.08■□□□□ 0.32
TNFSF13-202ENST00000349228 NFIAQ12857 509 aa17.08■□□□□ 0.32
TNFSF13-202ENST00000349228 CREG2Q8IUH2 290 aa17.08■□□□□ 0.32
TNFSF13-202ENST00000349228 FLAD1Q8NFF5 587 aa17.08■□□□□ 0.32
TNFSF13-202ENST00000349228 CAPZA3Q96KX2 299 aa17.08■□□□□ 0.32
TNFSF13-202ENST00000349228 KCTD10Q9H3F6 313 aa17.08■□□□□ 0.32
TNFSF13-202ENST00000349228 USP17L15C9J2P7 530 aa17.07■□□□□ 0.32
TNFSF13-202ENST00000349228 USP17L13C9JLJ4 530 aa17.07■□□□□ 0.32
TNFSF13-202ENST00000349228 USP17L11C9JVI0 530 aa17.07■□□□□ 0.32
TNFSF13-202ENST00000349228 USP17L18D6R9N7 530 aa17.07■□□□□ 0.32
TNFSF13-202ENST00000349228 USP17L22D6RA61 530 aa17.07■□□□□ 0.32
TNFSF13-202ENST00000349228 USP17L17D6RBQ6 530 aa17.07■□□□□ 0.32
TNFSF13-202ENST00000349228 USP17L19D6RCP7 530 aa17.07■□□□□ 0.32
TNFSF13-202ENST00000349228 USP17L20D6RJB6 530 aa17.07■□□□□ 0.32
TNFSF13-202ENST00000349228 E9PMD0 336 aa17.07■□□□□ 0.32
TNFSF13-202ENST00000349228 KRT18P05783 430 aaKnown RBP17.07■□□□□ 0.32
TNFSF13-202ENST00000349228 SLC12A3P55017 1021 aa17.07■□□□□ 0.32
TNFSF13-202ENST00000349228 ARHGAP4P98171 946 aa17.07■□□□□ 0.32
TNFSF13-202ENST00000349228 USP17L24Q0WX57 530 aa17.07■□□□□ 0.32
TNFSF13-202ENST00000349228 FAM83BQ5T0W9 1011 aa17.07■□□□□ 0.32
TNFSF13-202ENST00000349228 HGSNATQ68CP4 663 aa17.07■□□□□ 0.32
TNFSF13-202ENST00000349228 USP17L6PQ6QN14 398 aa17.07■□□□□ 0.32
TNFSF13-202ENST00000349228 CCNI2Q6ZMN8 369 aaPredicted RBP17.07■□□□□ 0.32
TNFSF13-202ENST00000349228 DNM3Q9UQ16 869 aa17.07■□□□□ 0.32
TNFSF13-202ENST00000349228 MEIS2O14770 477 aa17.06■□□□□ 0.32
TNFSF13-202ENST00000349228 RPA1P27694 616 aa17.06■□□□□ 0.32
TNFSF13-202ENST00000349228 CIITAP33076 1130 aa17.06■□□□□ 0.32
TNFSF13-202ENST00000349228 PAFAH1B1P43034 410 aa17.06■□□□□ 0.32
TNFSF13-202ENST00000349228 FBXO11Q86XK2 927 aa17.06■□□□□ 0.32
TNFSF13-202ENST00000349228 ETNPPLQ8TBG4 499 aa17.06■□□□□ 0.32
TNFSF13-202ENST00000349228 MXD3Q9BW11 206 aa17.06■□□□□ 0.32
TNFSF13-202ENST00000349228 DNAJC18Q9H819 358 aa17.06■□□□□ 0.32
TNFSF13-202ENST00000349228 TRAF3IP3Q9Y228 551 aa17.06■□□□□ 0.32
TNFSF13-202ENST00000349228 ERICH4A6NGS2 130 aa17.06■□□□□ 0.32
TNFSF13-202ENST00000349228 SREBF1P36956 1147 aa17.06■□□□□ 0.32
TNFSF13-202ENST00000349228 ADAM9Q13443 819 aa17.06■□□□□ 0.32
TNFSF13-202ENST00000349228 MUM1L1Q5H9M0 696 aa17.06■□□□□ 0.32
TNFSF13-202ENST00000349228 C10orf76Q5T2E6 689 aa17.06■□□□□ 0.32
TNFSF13-202ENST00000349228 FRMD5Q7Z6J6 570 aa17.06■□□□□ 0.32
TNFSF13-202ENST00000349228 SYT2Q8N9I0 419 aaPredicted RBP17.06■□□□□ 0.32
TNFSF13-202ENST00000349228 GLIS3Q8NEA6 775 aa17.06■□□□□ 0.32
TNFSF13-202ENST00000349228 COG1Q8WTW3 980 aa17.06■□□□□ 0.32
TNFSF13-202ENST00000349228 SCFD1Q8WVM8 642 aa17.06■□□□□ 0.32
TNFSF13-202ENST00000349228 OSBPL9Q96SU4 736 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms