RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 TRIM51Q9BSJ1 452 aa16.61■□□□□ 0.25
PTBP1-201ENST00000349038 PHF20Q9BVI0 1012 aa16.61■□□□□ 0.25
PTBP1-201ENST00000349038 OSBPL1AQ9BXW6 950 aa16.61■□□□□ 0.25
PTBP1-201ENST00000349038 DOCK2Q92608 1830 aa16.61■□□□□ 0.25
PTBP1-201ENST00000349038 IGF2BP3O00425 579 aaKnown RBP eCLIP16.61■□□□□ 0.253e-6■■□□□ 12.2
PTBP1-201ENST00000349038 PKN1Q16512 942 aa16.61■□□□□ 0.25
PTBP1-201ENST00000349038 GDAP1Q8TB36 358 aa16.61■□□□□ 0.25
PTBP1-201ENST00000349038 TAF1DQ9H5J8 278 aaPredicted RBP16.61■□□□□ 0.25
PTBP1-201ENST00000349038 GOLGA6L10A0A0M3HER8 536 aa16.6■□□□□ 0.25
PTBP1-201ENST00000349038 UBOX5O94941 541 aa16.6■□□□□ 0.25
PTBP1-201ENST00000349038 BMP15O95972 392 aa16.6■□□□□ 0.25
PTBP1-201ENST00000349038 POLR2FP61218 127 aaKnown RBP16.6■□□□□ 0.25
PTBP1-201ENST00000349038 TNNC1P63316 161 aa16.6■□□□□ 0.25
PTBP1-201ENST00000349038 IL17AQ16552 155 aa16.6■□□□□ 0.25
PTBP1-201ENST00000349038 FAM47AQ5JRC9 791 aa16.6■□□□□ 0.25
PTBP1-201ENST00000349038 IFIT1BQ5T764 474 aaKnown RBP16.6■□□□□ 0.25
PTBP1-201ENST00000349038 ADSSL1Q8N142 457 aa16.6■□□□□ 0.25
PTBP1-201ENST00000349038 SPATA5Q8NB90 893 aa16.6■□□□□ 0.25
PTBP1-201ENST00000349038 CAVIN3Q969G5 261 aa16.6■□□□□ 0.25
PTBP1-201ENST00000349038 CHMP6Q96FZ7 201 aa16.6■□□□□ 0.25
PTBP1-201ENST00000349038 PIDD1Q9HB75 910 aa16.6■□□□□ 0.25
PTBP1-201ENST00000349038 KCNK9Q9NPC2 374 aa16.6■□□□□ 0.25
PTBP1-201ENST00000349038 DNAJC17Q9NVM6 304 aaKnown RBP16.6■□□□□ 0.25
PTBP1-201ENST00000349038 NOP53Q9NZM5 478 aaKnown RBP16.6■□□□□ 0.25
PTBP1-201ENST00000349038 ARPP21Q9UBL0 812 aaPredicted RBP16.6■□□□□ 0.25
PTBP1-201ENST00000349038 AGAP1Q9UPQ3 857 aa16.6■□□□□ 0.25
PTBP1-201ENST00000349038 SOS2Q07890 1332 aaPredicted RBP16.6■□□□□ 0.25
PTBP1-201ENST00000349038 ARAP2Q8WZ64 1704 aa16.6■□□□□ 0.25
PTBP1-201ENST00000349038 CCT8L1PA6NM43 557 aa16.6■□□□□ 0.25
PTBP1-201ENST00000349038 KRIT1O00522 736 aa16.6■□□□□ 0.25
PTBP1-201ENST00000349038 GNAT1P11488 350 aa16.6■□□□□ 0.25
PTBP1-201ENST00000349038 GLE1Q53GS7 698 aaKnown RBP16.6■□□□□ 0.25
PTBP1-201ENST00000349038 YTHDF3Q7Z739 585 aaKnown RBP16.6■□□□□ 0.25
PTBP1-201ENST00000349038 NLRP10Q86W26 655 aa16.6■□□□□ 0.25
PTBP1-201ENST00000349038 LRP5O75197 1615 aa16.6■□□□□ 0.25
PTBP1-201ENST00000349038 TTI1O43156 1089 aa16.59■□□□□ 0.25
PTBP1-201ENST00000349038 PYGLP06737 847 aa16.59■□□□□ 0.25
PTBP1-201ENST00000349038 SRGNP10124 158 aa16.59■□□□□ 0.25
PTBP1-201ENST00000349038 CTCFP49711 727 aaPredicted RBP16.59■□□□□ 0.25
PTBP1-201ENST00000349038 ALDH5A1P51649 535 aaPredicted RBP16.59■□□□□ 0.25
PTBP1-201ENST00000349038 GIGYF2Q6Y7W6 1299 aaKnown RBP16.59■□□□□ 0.25
PTBP1-201ENST00000349038 LCORLQ8N3X6 602 aa16.59■□□□□ 0.25
PTBP1-201ENST00000349038 C3orf20Q8ND61 904 aa16.59■□□□□ 0.25
PTBP1-201ENST00000349038 ETAA1Q9NY74 926 aa16.59■□□□□ 0.25
PTBP1-201ENST00000349038 BIN2Q9UBW5 565 aaPredicted RBP16.59■□□□□ 0.25
PTBP1-201ENST00000349038 PNPLA7Q6ZV29 1317 aa16.59■□□□□ 0.25
PTBP1-201ENST00000349038 PUM3Q15397 648 aaKnown RBP16.59■□□□□ 0.25
PTBP1-201ENST00000349038 SPTY2D1Q68D10 685 aaPredicted RBP16.59■□□□□ 0.25
PTBP1-201ENST00000349038 RUFY4Q6ZNE9 571 aa16.59■□□□□ 0.25
PTBP1-201ENST00000349038 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.59■□□□□ 0.259e-7■■□□□ 14.2
PTBP1-201ENST00000349038 KAT6BQ8WYB5 2073 aa16.59■□□□□ 0.25
PTBP1-201ENST00000349038 TSC22D3Q99576 134 aa16.59■□□□□ 0.25
PTBP1-201ENST00000349038 RBM28Q9NW13 759 aaKnown RBP16.59■□□□□ 0.25
PTBP1-201ENST00000349038 A0A1B0GVG6 124 aa16.59■□□□□ 0.25
PTBP1-201ENST00000349038 SART1O43290 800 aaKnown RBP16.59■□□□□ 0.25
PTBP1-201ENST00000349038 FUT2Q10981 343 aa16.59■□□□□ 0.25
PTBP1-201ENST00000349038 SEC23AQ15436 765 aa16.59■□□□□ 0.25
PTBP1-201ENST00000349038 UAP1Q16222 522 aaPredicted RBP16.59■□□□□ 0.25
PTBP1-201ENST00000349038 INF2Q27J81 1249 aa16.59■□□□□ 0.25
PTBP1-201ENST00000349038 TLDC1Q6P9B6 456 aa16.59■□□□□ 0.25
PTBP1-201ENST00000349038 FAM133AQ8N9E0 248 aa16.59■□□□□ 0.25
PTBP1-201ENST00000349038 TNFRSF25Q93038 417 aa16.59■□□□□ 0.25
PTBP1-201ENST00000349038 INTS9Q9NV88 658 aaKnown RBP16.59■□□□□ 0.25
PTBP1-201ENST00000349038 SEPT11Q9NVA2 429 aaKnown RBP16.59■□□□□ 0.25
PTBP1-201ENST00000349038 PNMA3Q9UL41 463 aa16.59■□□□□ 0.25
PTBP1-201ENST00000349038 DISP2A7MBM2 1401 aa16.58■□□□□ 0.25
PTBP1-201ENST00000349038 GNAT2P19087 354 aa16.58■□□□□ 0.24
PTBP1-201ENST00000349038 EPS15P42566 896 aa16.58■□□□□ 0.24
PTBP1-201ENST00000349038 PLTPP55058 493 aa16.58■□□□□ 0.24
PTBP1-201ENST00000349038 ZNF507Q8TCN5 953 aa16.58■□□□□ 0.24
PTBP1-201ENST00000349038 CPVLQ9H3G5 476 aa16.58■□□□□ 0.24
PTBP1-201ENST00000349038 ECT2Q9H8V3 914 aa16.58■□□□□ 0.24
PTBP1-201ENST00000349038 BCORQ6W2J9 1755 aa16.58■□□□□ 0.24
PTBP1-201ENST00000349038 SNUPNO95149 360 aaKnown RBP16.58■□□□□ 0.24
PTBP1-201ENST00000349038 RASGRF1Q13972 1273 aa16.58■□□□□ 0.24
PTBP1-201ENST00000349038 PPP2R5BQ15173 497 aa16.58■□□□□ 0.24
PTBP1-201ENST00000349038 RPS6KA1Q15418 735 aa16.58■□□□□ 0.24
PTBP1-201ENST00000349038 PPP4R3AQ6IN85 833 aa16.58■□□□□ 0.24
PTBP1-201ENST00000349038 PDXDC2PQ6P474 469 aa16.58■□□□□ 0.24
PTBP1-201ENST00000349038 DTHD1Q6ZMT9 781 aa16.58■□□□□ 0.24
PTBP1-201ENST00000349038 NELFCDQ8IXH7 590 aa16.58■□□□□ 0.24
PTBP1-201ENST00000349038 CCDC26Q8TAB7 109 aa16.58■□□□□ 0.24
PTBP1-201ENST00000349038 CCT6BQ92526 530 aa16.58■□□□□ 0.24
PTBP1-201ENST00000349038 NACAP1Q9BZK3 213 aa16.58■□□□□ 0.24
PTBP1-201ENST00000349038 JAG2Q9Y219 1238 aa16.58■□□□□ 0.24
PTBP1-201ENST00000349038 EEF1GP26641 437 aaKnown RBP16.57■□□□□ 0.24
PTBP1-201ENST00000349038 IFI35P80217 286 aaPredicted RBP16.57■□□□□ 0.24
PTBP1-201ENST00000349038 EVX2Q03828 476 aa16.57■□□□□ 0.24
PTBP1-201ENST00000349038 BYSLQ13895 437 aaKnown RBP16.57■□□□□ 0.24
PTBP1-201ENST00000349038 EAPPQ56P03 285 aaPredicted RBP16.57■□□□□ 0.24
PTBP1-201ENST00000349038 CCDC47Q96A33 483 aaKnown RBP16.57■□□□□ 0.24
PTBP1-201ENST00000349038 PSMD1Q99460 953 aa16.57■□□□□ 0.24
PTBP1-201ENST00000349038 DBR1Q9UK59 544 aaKnown RBP16.57■□□□□ 0.24
PTBP1-201ENST00000349038 KRT13P13646 458 aa16.57■□□□□ 0.24
PTBP1-201ENST00000349038 KIF5BP33176 963 aa16.57■□□□□ 0.24
PTBP1-201ENST00000349038 HSPA1LP34931 641 aa16.57■□□□□ 0.24
PTBP1-201ENST00000349038 ATP2C1P98194 919 aaPredicted RBP16.57■□□□□ 0.24
PTBP1-201ENST00000349038 CATIPQ7Z7H3 387 aa16.57■□□□□ 0.24
PTBP1-201ENST00000349038 XPO6Q96QU8 1125 aaKnown RBP16.57■□□□□ 0.24
PTBP1-201ENST00000349038 DDX23Q9BUQ8 820 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms