RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 CAND2O75155 1236 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 CLSTN1O94985 981 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 NAB2Q15742 525 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 MIS18BP1Q6P0N0 1132 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 TMTC3Q6ZXV5 915 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 TAX1BP1Q86VP1 789 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 C4orf32Q8N8J7 132 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 CELF4Q9BZC1 486 aaKnown RBP16.81■□□□□ 0.28
LMNA-201ENST00000347559 TRIM9Q9C026 710 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 CCDC113Q9H0I3 377 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 LUC7LQ9NQ29 371 aaKnown RBP16.81■□□□□ 0.28
LMNA-201ENST00000347559 CCDC194A0A1B0GVG4 234 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 NMT2O60551 498 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 RCAN1P53805 252 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 ADCY2Q08462 1091 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 MTMR3Q13615 1198 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 RAPGEF1Q13905 1077 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 PPP2R5BQ15173 497 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 INF2Q27J81 1249 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 ERMARDQ5T6L9 678 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 HGSNATQ68CP4 663 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 CRELD2Q6UXH1 353 aaPredicted RBP16.81■□□□□ 0.28
LMNA-201ENST00000347559 UHMK1Q8TAS1 419 aaKnown RBP16.81■□□□□ 0.28
LMNA-201ENST00000347559 FAM129AQ9BZQ8 928 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 KANSL2Q9H9L4 492 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 KLHL33A6NCF5 533 aa16.8■□□□□ 0.28
LMNA-201ENST00000347559 PAEPP09466 180 aa16.8■□□□□ 0.28
LMNA-201ENST00000347559 POLR2FP61218 127 aaKnown RBP16.8■□□□□ 0.28
LMNA-201ENST00000347559 TROAPQ12815 778 aa16.8■□□□□ 0.28
LMNA-201ENST00000347559 MAN2A1Q16706 1144 aa16.8■□□□□ 0.28
LMNA-201ENST00000347559 ASTE1Q2TB18 679 aaPredicted RBP16.8■□□□□ 0.28
LMNA-201ENST00000347559 SFMBT2Q5VUG0 894 aa16.8■□□□□ 0.28
LMNA-201ENST00000347559 TRIM68Q6AZZ1 485 aa16.8■□□□□ 0.28
LMNA-201ENST00000347559 MTFR1LQ9H019 292 aa16.8■□□□□ 0.28
LMNA-201ENST00000347559 FAM170AA1A519 330 aa16.8■□□□□ 0.28
LMNA-201ENST00000347559 KRIT1O00522 736 aa16.8■□□□□ 0.28
LMNA-201ENST00000347559 ITGA4P13612 1032 aa16.8■□□□□ 0.28
LMNA-201ENST00000347559 ALDH5A1P51649 535 aaPredicted RBP16.8■□□□□ 0.28
LMNA-201ENST00000347559 TRPM8Q7Z2W7 1104 aa16.8■□□□□ 0.28
LMNA-201ENST00000347559 CNTNAP5Q8WYK1 1306 aa16.8■□□□□ 0.28
LMNA-201ENST00000347559 A0A087X0T9 212 aa16.79■□□□□ 0.28
LMNA-201ENST00000347559 TTI1O43156 1089 aa16.79■□□□□ 0.28
LMNA-201ENST00000347559 SMNDC1O75940 238 aaKnown RBP eCLIP16.79■□□□□ 0.28
LMNA-201ENST00000347559 FAM228BP0C875 321 aa16.79■□□□□ 0.28
LMNA-201ENST00000347559 RBBP5Q15291 538 aaKnown RBP16.79■□□□□ 0.28
LMNA-201ENST00000347559 DYMQ7RTS9 669 aa16.79■□□□□ 0.28
LMNA-201ENST00000347559 CABP7Q86V35 215 aa16.79■□□□□ 0.28
LMNA-201ENST00000347559 ERICH1Q86X53 443 aa16.79■□□□□ 0.28
LMNA-201ENST00000347559 BLIDQ8IZY5 108 aa16.79■□□□□ 0.28
LMNA-201ENST00000347559 KIAA0895Q8NCT3 520 aa16.79■□□□□ 0.28
LMNA-201ENST00000347559 ISCA1Q9BUE6 129 aa16.79■□□□□ 0.28
LMNA-201ENST00000347559 SLC12A4Q9UP95 1085 aa16.79■□□□□ 0.28
LMNA-201ENST00000347559 UBOX5O94941 541 aa16.79■□□□□ 0.28
LMNA-201ENST00000347559 ARID4AP29374 1257 aaPredicted RBP16.79■□□□□ 0.28
LMNA-201ENST00000347559 CYB5RLQ6IPT4 315 aa16.79■□□□□ 0.28
LMNA-201ENST00000347559 TMC3Q7Z5M5 1100 aa16.79■□□□□ 0.28
LMNA-201ENST00000347559 L3MBTL3Q96JM7 780 aaPredicted RBP16.79■□□□□ 0.28
LMNA-201ENST00000347559 ETAA1Q9NY74 926 aa16.79■□□□□ 0.28
LMNA-201ENST00000347559 ABCF2Q9UG63 623 aa16.79■□□□□ 0.28
LMNA-201ENST00000347559 LRP6O75581 1613 aa16.79■□□□□ 0.28
LMNA-201ENST00000347559 IGF2BP3O00425 579 aaKnown RBP eCLIP16.79■□□□□ 0.28
LMNA-201ENST00000347559 TLR2O60603 784 aa16.79■□□□□ 0.28
LMNA-201ENST00000347559 MYBP10242 640 aa16.79■□□□□ 0.28
LMNA-201ENST00000347559 CYP7A1P22680 504 aa16.79■□□□□ 0.28
LMNA-201ENST00000347559 IQCDQ96DY2 449 aa16.79■□□□□ 0.28
LMNA-201ENST00000347559 PRMT1Q99873 361 aaKnown RBP16.79■□□□□ 0.28
LMNA-201ENST00000347559 AKAP11Q9UKA4 1901 aa16.78■□□□□ 0.28
LMNA-201ENST00000347559 SSU72P8A0A1W2PR75 194 aa16.78■□□□□ 0.28
LMNA-201ENST00000347559 F8VZ95 297 aa16.78■□□□□ 0.28
LMNA-201ENST00000347559 EVI5O60447 810 aa16.78■□□□□ 0.28
LMNA-201ENST00000347559 CSF1RP07333 972 aa16.78■□□□□ 0.28
LMNA-201ENST00000347559 NQO1P15559 274 aaKnown RBP16.78■□□□□ 0.28
LMNA-201ENST00000347559 GNAT2P19087 354 aa16.78■□□□□ 0.28
LMNA-201ENST00000347559 GNPTABQ3T906 1256 aa16.78■□□□□ 0.28
LMNA-201ENST00000347559 CCDC26Q8TAB7 109 aa16.78■□□□□ 0.28
LMNA-201ENST00000347559 CCHCR1Q8TD31 782 aa16.78■□□□□ 0.28
LMNA-201ENST00000347559 ACSBG1Q96GR2 724 aa16.78■□□□□ 0.28
LMNA-201ENST00000347559 PLCD4Q9BRC7 762 aa16.78■□□□□ 0.28
LMNA-201ENST00000347559 CNOT10Q9H9A5 744 aaKnown RBP16.78■□□□□ 0.28
LMNA-201ENST00000347559 THRAP3Q9Y2W1 955 aaKnown RBP16.78■□□□□ 0.28
LMNA-201ENST00000347559 A0A0G2JS52 829 aa16.78■□□□□ 0.28
LMNA-201ENST00000347559 SHBGP04278 402 aa16.78■□□□□ 0.28
LMNA-201ENST00000347559 LRRC41Q15345 812 aa16.78■□□□□ 0.28
LMNA-201ENST00000347559 TXNRD1Q16881 649 aa16.78■□□□□ 0.28
LMNA-201ENST00000347559 ZNF512BQ96KM6 892 aaPredicted RBP16.78■□□□□ 0.28
LMNA-201ENST00000347559 ECT2Q9H8V3 914 aa16.78■□□□□ 0.28
LMNA-201ENST00000347559 TCP11L1Q9NUJ3 509 aa16.78■□□□□ 0.28
LMNA-201ENST00000347559 PKD1L3Q7Z443 1732 aa16.78■□□□□ 0.28
LMNA-201ENST00000347559 SNUPNO95149 360 aaKnown RBP16.77■□□□□ 0.28
LMNA-201ENST00000347559 FAM83BQ5T0W9 1011 aa16.77■□□□□ 0.28
LMNA-201ENST00000347559 ADAT2Q7Z6V5 191 aaKnown RBP16.77■□□□□ 0.28
LMNA-201ENST00000347559 FAM133AQ8N9E0 248 aa16.77■□□□□ 0.28
LMNA-201ENST00000347559 ANKS1AQ92625 1134 aa16.77■□□□□ 0.28
LMNA-201ENST00000347559 ZNF317Q96PQ6 595 aaPredicted RBP16.77■□□□□ 0.28
LMNA-201ENST00000347559 TRIM51Q9BSJ1 452 aa16.77■□□□□ 0.28
LMNA-201ENST00000347559 LSM14BQ9BX40 385 aaKnown RBP16.77■□□□□ 0.28
LMNA-201ENST00000347559 INTS9Q9NV88 658 aaKnown RBP16.77■□□□□ 0.28
LMNA-201ENST00000347559 NOC2LQ9Y3T9 749 aaKnown RBP16.77■□□□□ 0.28
LMNA-201ENST00000347559 ICA1Q05084 483 aa16.77■□□□□ 0.27
LMNA-201ENST00000347559 KLHL30Q0D2K2 578 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms