RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 HOXD8P13378 290 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-201ENST00000346501 ITGB5P18084 799 aa17.98■□□□□ 0.47
TSPAN4-201ENST00000346501 CYP2C18P33260 490 aa17.98■□□□□ 0.47
TSPAN4-201ENST00000346501 AK2P54819 239 aa17.98■□□□□ 0.47
TSPAN4-201ENST00000346501 CEP55Q53EZ4 464 aa17.98■□□□□ 0.47
TSPAN4-201ENST00000346501 PSRC1Q6PGN9 363 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-201ENST00000346501 WASF1Q92558 559 aa17.98■□□□□ 0.47
TSPAN4-201ENST00000346501 PGBD1Q96JS3 809 aa17.98■□□□□ 0.47
TSPAN4-201ENST00000346501 RNPC3Q96LT9 517 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-201ENST00000346501 NOC4LQ9BVI4 516 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-201ENST00000346501 TUT1Q9H6E5 874 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-201ENST00000346501 VPS54Q9P1Q0 977 aa17.98■□□□□ 0.47
TSPAN4-201ENST00000346501 SCN10AQ9Y5Y9 1956 aa17.97■□□□□ 0.47
TSPAN4-201ENST00000346501 PFKFB2O60825 505 aa17.97■□□□□ 0.47
TSPAN4-201ENST00000346501 PPFIA3O75145 1194 aa17.97■□□□□ 0.47
TSPAN4-201ENST00000346501 GNAT1P11488 350 aa17.97■□□□□ 0.47
TSPAN4-201ENST00000346501 CYP2C9P11712 490 aa17.97■□□□□ 0.47
TSPAN4-201ENST00000346501 CSF2RAP15509 400 aa17.97■□□□□ 0.47
TSPAN4-201ENST00000346501 ITGB8P26012 769 aa17.97■□□□□ 0.47
TSPAN4-201ENST00000346501 CLK2P49760 499 aaKnown RBP17.97■□□□□ 0.47
TSPAN4-201ENST00000346501 ARHGAP4P98171 946 aa17.97■□□□□ 0.47
TSPAN4-201ENST00000346501 SEMA3FQ13275 785 aa17.97■□□□□ 0.47
TSPAN4-201ENST00000346501 SHHQ15465 462 aa17.97■□□□□ 0.47
TSPAN4-201ENST00000346501 GALNT17Q6IS24 598 aa17.97■□□□□ 0.47
TSPAN4-201ENST00000346501 SEPT1Q8WYJ6 367 aa17.97■□□□□ 0.47
TSPAN4-201ENST00000346501 KAT2BQ92831 832 aa17.97■□□□□ 0.47
TSPAN4-201ENST00000346501 TNPO1Q92973 898 aaKnown RBP17.97■□□□□ 0.47
TSPAN4-201ENST00000346501 TMEM260Q9NX78 707 aa17.97■□□□□ 0.47
TSPAN4-201ENST00000346501 PKD2L1Q9P0L9 805 aa17.97■□□□□ 0.47
TSPAN4-201ENST00000346501 LTBP2Q14767 1821 aa17.97■□□□□ 0.47
TSPAN4-201ENST00000346501 LGALS2P05162 132 aa17.96■□□□□ 0.47
TSPAN4-201ENST00000346501 CCL23P55773 120 aa17.96■□□□□ 0.47
TSPAN4-201ENST00000346501 UTP14CQ5TAP6 766 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-201ENST00000346501 NIPA1Q7RTP0 329 aa17.96■□□□□ 0.47
TSPAN4-201ENST00000346501 CAGE1Q8TC20 777 aa17.96■□□□□ 0.47
TSPAN4-201ENST00000346501 IL17RAQ96F46 866 aa17.96■□□□□ 0.47
TSPAN4-201ENST00000346501 GPR20Q99678 358 aa17.96■□□□□ 0.47
TSPAN4-201ENST00000346501 AZI2Q9H6S1 392 aa17.96■□□□□ 0.47
TSPAN4-201ENST00000346501 IL23AQ9NPF7 189 aa17.96■□□□□ 0.47
TSPAN4-201ENST00000346501 KCNH7Q9NS40 1196 aa17.96■□□□□ 0.47
TSPAN4-201ENST00000346501 HDAC6Q9UBN7 1215 aa17.96■□□□□ 0.47
TSPAN4-201ENST00000346501 GTF2IRD1Q9UHL9 959 aa17.96■□□□□ 0.47
TSPAN4-201ENST00000346501 HAS3O00219 553 aa17.95■□□□□ 0.46
TSPAN4-201ENST00000346501 PITPNM1O00562 1244 aa17.95■□□□□ 0.46
TSPAN4-201ENST00000346501 PFKMP08237 780 aa17.95■□□□□ 0.46
TSPAN4-201ENST00000346501 KCNA2P16389 499 aa17.95■□□□□ 0.46
TSPAN4-201ENST00000346501 RFC2P35250 354 aa17.95■□□□□ 0.46
TSPAN4-201ENST00000346501 SETQ01105 290 aaPredicted RBP17.95■□□□□ 0.46
TSPAN4-201ENST00000346501 SCRN1Q12765 414 aa17.95■□□□□ 0.46
TSPAN4-201ENST00000346501 GPR153Q6NV75 609 aa17.95■□□□□ 0.46
TSPAN4-201ENST00000346501 PLA2G4DQ86XP0 818 aa17.95■□□□□ 0.46
TSPAN4-201ENST00000346501 GLG1Q92896 1179 aa17.95■□□□□ 0.46
TSPAN4-201ENST00000346501 JPH1Q9HDC5 661 aaPredicted RBP17.95■□□□□ 0.46
TSPAN4-201ENST00000346501 SLC9A2Q9UBY0 812 aa17.95■□□□□ 0.46
TSPAN4-201ENST00000346501 TPCN1Q9ULQ1 816 aa17.95■□□□□ 0.46
TSPAN4-201ENST00000346501 C17orf102A2RUQ5 167 aa17.94■□□□□ 0.46
TSPAN4-201ENST00000346501 PARNO95453 639 aaKnown RBP17.94■□□□□ 0.46
TSPAN4-201ENST00000346501 SEC24BO95487 1268 aa17.94■□□□□ 0.46
TSPAN4-201ENST00000346501 FGBP02675 491 aa17.94■□□□□ 0.46
TSPAN4-201ENST00000346501 CYP3A4P08684 503 aa17.94■□□□□ 0.46
TSPAN4-201ENST00000346501 ACTN1P12814 892 aa17.94■□□□□ 0.46
TSPAN4-201ENST00000346501 TCF7P36402 384 aaPredicted RBP17.94■□□□□ 0.46
TSPAN4-201ENST00000346501 C9orf50Q5SZB4 431 aa17.94■□□□□ 0.46
TSPAN4-201ENST00000346501 GDF6Q6KF10 455 aaPredicted RBP17.94■□□□□ 0.46
TSPAN4-201ENST00000346501 C16orf70Q9BSU1 422 aa17.94■□□□□ 0.46
TSPAN4-201ENST00000346501 SMARCAD1Q9H4L7 1026 aa17.94■□□□□ 0.46
TSPAN4-201ENST00000346501 PCDHA4Q9UN74 947 aa17.94■□□□□ 0.46
TSPAN4-201ENST00000346501 NFASCO94856 1347 aa17.94■□□□□ 0.46
TSPAN4-201ENST00000346501 STK36Q9NRP7 1315 aa17.94■□□□□ 0.46
TSPAN4-201ENST00000346501 MEIS1O00470 390 aa17.93■□□□□ 0.46
TSPAN4-201ENST00000346501 ATP9AO75110 1047 aa17.93■□□□□ 0.46
TSPAN4-201ENST00000346501 PTK7Q13308 1070 aa17.93■□□□□ 0.46
TSPAN4-201ENST00000346501 BLIDQ8IZY5 108 aa17.93■□□□□ 0.46
TSPAN4-201ENST00000346501 AFAP1L1Q8TED9 768 aa17.93■□□□□ 0.46
TSPAN4-201ENST00000346501 PPP1R13LQ8WUF5 828 aa17.93■□□□□ 0.46
TSPAN4-201ENST00000346501 BRMS1Q9HCU9 246 aa17.93■□□□□ 0.46
TSPAN4-201ENST00000346501 ERAP1Q9NZ08 941 aa17.93■□□□□ 0.46
TSPAN4-201ENST00000346501 ORC3Q9UBD5 711 aaPredicted RBP17.93■□□□□ 0.46
TSPAN4-201ENST00000346501 USP11P51784 963 aa17.92■□□□□ 0.46
TSPAN4-201ENST00000346501 TRIM29Q14134 588 aa17.92■□□□□ 0.46
TSPAN4-201ENST00000346501 C8orf34Q49A92 452 aa17.92■□□□□ 0.46
TSPAN4-201ENST00000346501 ZNF365Q70YC5 407 aa17.92■□□□□ 0.46
TSPAN4-201ENST00000346501 IL27Q8NEV9 243 aa17.92■□□□□ 0.46
TSPAN4-201ENST00000346501 ATP6V0A1Q93050 837 aa17.92■□□□□ 0.46
TSPAN4-201ENST00000346501 LRCH3Q96II8 777 aa17.92■□□□□ 0.46
TSPAN4-201ENST00000346501 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.92■□□□□ 0.462e-12■□□□□ 9.2
TSPAN4-201ENST00000346501 FTOQ9C0B1 505 aaKnown RBP eCLIP17.92■□□□□ 0.46
TSPAN4-201ENST00000346501 BCAS3Q9H6U6 928 aa17.92■□□□□ 0.46
TSPAN4-201ENST00000346501 AGO4Q9HCK5 861 aaKnown RBP17.92■□□□□ 0.46
TSPAN4-201ENST00000346501 TBC1D22BQ9NU19 505 aa17.92■□□□□ 0.46
TSPAN4-201ENST00000346501 UMODL1Q5DID0 1318 aa17.92■□□□□ 0.46
TSPAN4-201ENST00000346501 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.91■□□□□ 0.46
TSPAN4-201ENST00000346501 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.91■□□□□ 0.46
TSPAN4-201ENST00000346501 SMIM10L2AP0DMW4 78 aa17.91■□□□□ 0.46
TSPAN4-201ENST00000346501 SMIM10L2BP0DMW5 78 aa17.91■□□□□ 0.46
TSPAN4-201ENST00000346501 ARP10275 920 aa17.91■□□□□ 0.46
TSPAN4-201ENST00000346501 ACRP10323 421 aa17.91■□□□□ 0.46
TSPAN4-201ENST00000346501 EPHB4P54760 987 aa17.91■□□□□ 0.46
TSPAN4-201ENST00000346501 SMAD3P84022 425 aaKnown RBP17.91■□□□□ 0.46
TSPAN4-201ENST00000346501 PRR16Q569H4 304 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms