RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 CYP2D6P10635 497 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 WHAMMP3Q1A5X7 153 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 METTL16Q86W50 562 aaKnown RBP11.87□□□□□ -0.51
CLCN6-202ENST00000346436 CCDC51Q96ER9 411 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 CPVLQ9H3G5 476 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 C1orf112Q9NSG2 853 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 MROH7-TTC4A0A0A0MT08 1334 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 TRIM49BA6NDI0 452 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 K7ENM7 598 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 CXCR5P32302 372 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 LIFRP42702 1097 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 GTF2A1P52655 376 aaPredicted RBP11.87□□□□□ -0.51
CLCN6-202ENST00000346436 ANTXR2P58335 489 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 LRRC41Q15345 812 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 MAP7D1Q3KQU3 841 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 ZNF577Q9BSK1 485 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 NUP58Q9BVL2 599 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 KATNAL1Q9BW62 490 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 WDR64B1ANS9 1081 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 CIITAP33076 1130 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 CYP27A1Q02318 531 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 RNF207Q6ZRF8 634 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 CCDC25Q86WR0 208 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 FEM1BQ9UK73 627 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 FAN1Q9Y2M0 1017 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLCN6-202ENST00000346436 COL4A3BPQ9Y5P4 624 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 MMP14P50281 582 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 TERF2Q15554 542 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 GEN1Q17RS7 908 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 TTC30AQ86WT1 665 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 GIMAP7Q8NHV1 300 aa11.87□□□□□ -0.51
CLCN6-202ENST00000346436 MYO1EQ12965 1108 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 LRCH2Q5VUJ6 765 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 KCNV1Q6PIU1 500 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 CATSPER4Q7RTX7 472 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 GPR101Q96P66 508 aaPredicted RBP11.86□□□□□ -0.51
CLCN6-202ENST00000346436 WDR24Q96S15 920 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 TUBGCP2Q9BSJ2 902 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 CEP104O60308 925 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 TGFB2P61812 414 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 CACNB1Q02641 598 aaPredicted RBP11.86□□□□□ -0.51
CLCN6-202ENST00000346436 TUBB2AQ13885 445 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 NEDD9Q14511 834 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 KRT31Q15323 416 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 STYK1Q6J9G0 422 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 NEK8Q86SG6 692 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 RYBPQ8N488 228 aaPredicted RBP11.86□□□□□ -0.51
CLCN6-202ENST00000346436 CNOT6LQ96LI5 555 aaKnown RBP11.86□□□□□ -0.51
CLCN6-202ENST00000346436 CRAMP1Q96RY5 1269 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 TUBB2BQ9BVA1 445 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 DSTYKQ6XUX3 929 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 ARMCX2Q7L311 632 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 TUBBP07437 444 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 GCFC2P16383 781 aaKnown RBP11.86□□□□□ -0.51
CLCN6-202ENST00000346436 RECQLP46063 649 aaPredicted RBP11.86□□□□□ -0.51
CLCN6-202ENST00000346436 ATP1A2P50993 1020 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 ASIC2Q16515 512 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 TAOK1Q7L7X3 1001 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 EEPD1Q7L9B9 569 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 FAM178BQ8IXR5 827 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.86□□□□□ -0.51
CLCN6-202ENST00000346436 LSM14BQ9BX40 385 aaKnown RBP11.86□□□□□ -0.51
CLCN6-202ENST00000346436 TOPORSQ9NS56 1045 aaPredicted RBP11.86□□□□□ -0.51
CLCN6-202ENST00000346436 IRAK4Q9NWZ3 460 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 DDX25Q9UHL0 483 aaKnown RBP11.86□□□□□ -0.51
CLCN6-202ENST00000346436 SUGT1Q9Y2Z0 365 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 ITSN1Q15811 1721 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 NDUFAB1O14561 156 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 SRGAP2O75044 1071 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 OR52Z1P0C646 297 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 CALCOCO2Q13137 446 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 SLC9C1Q4G0N8 1177 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 HAUS1Q96CS2 278 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 TTC1Q99614 292 aa11.86□□□□□ -0.51
CLCN6-202ENST00000346436 MTRF1LQ9UGC7 380 aaKnown RBP11.86□□□□□ -0.51
CLCN6-202ENST00000346436 HEXIM1O94992 359 aaKnown RBP11.85□□□□□ -0.51
CLCN6-202ENST00000346436 NNMTP40261 264 aa11.85□□□□□ -0.51
CLCN6-202ENST00000346436 FMR1Q06787 632 aaKnown RBP eCLIP11.85□□□□□ -0.51
CLCN6-202ENST00000346436 C2orf54Q08AI8 447 aa11.85□□□□□ -0.51
CLCN6-202ENST00000346436 KLHL30Q0D2K2 578 aa11.85□□□□□ -0.51
CLCN6-202ENST00000346436 C9orf131Q5VYM1 1079 aa11.85□□□□□ -0.51
CLCN6-202ENST00000346436 CC2D1AQ6P1N0 951 aaPredicted RBP11.85□□□□□ -0.51
CLCN6-202ENST00000346436 TTLL3Q9Y4R7 772 aa11.85□□□□□ -0.51
CLCN6-202ENST00000346436 PPP1R7Q15435 360 aa11.85□□□□□ -0.51
CLCN6-202ENST00000346436 DIXDC1Q155Q3 683 aa11.85□□□□□ -0.51
CLCN6-202ENST00000346436 USP49Q70CQ1 688 aa11.85□□□□□ -0.51
CLCN6-202ENST00000346436 SMIM5Q71RC9 77 aa11.85□□□□□ -0.51
CLCN6-202ENST00000346436 PAIP2Q9BPZ3 127 aaKnown RBP11.85□□□□□ -0.51
CLCN6-202ENST00000346436 ABCB6Q9NP58 842 aa11.85□□□□□ -0.51
CLCN6-202ENST00000346436 PFDN4Q9NQP4 134 aa11.85□□□□□ -0.51
CLCN6-202ENST00000346436 ANKRD65E5RJM6 399 aa11.85□□□□□ -0.51
CLCN6-202ENST00000346436 VEPH1Q14D04 833 aa11.85□□□□□ -0.51
CLCN6-202ENST00000346436 EZH2Q15910 746 aaKnown RBP11.85□□□□□ -0.51
CLCN6-202ENST00000346436 PDXDC2PQ6P474 469 aa11.85□□□□□ -0.51
CLCN6-202ENST00000346436 PARD3BQ8TEW8 1205 aa11.85□□□□□ -0.51
CLCN6-202ENST00000346436 CEP63Q96MT8 703 aa11.85□□□□□ -0.51
CLCN6-202ENST00000346436 AAASQ9NRG9 546 aa11.85□□□□□ -0.51
CLCN6-202ENST00000346436 DONSONQ9NYP3 566 aa11.85□□□□□ -0.51
CLCN6-202ENST00000346436 CCDC89Q8N998 374 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms