RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 MTA3Q9BTC8 594 aa23.54■■□□□ 1.36
TRIM3-201ENST00000345851 RBM28Q9NW13 759 aaKnown RBP23.54■■□□□ 1.36
TRIM3-201ENST00000345851 DOCK2Q92608 1830 aa23.54■■□□□ 1.36
TRIM3-201ENST00000345851 NMT2O60551 498 aa23.54■■□□□ 1.36
TRIM3-201ENST00000345851 SATB1Q01826 763 aa23.54■■□□□ 1.36
TRIM3-201ENST00000345851 GPKOWQ92917 476 aaPredicted RBP eCLIP23.54■■□□□ 1.36
TRIM3-201ENST00000345851 HNRNPH3P31942 346 aaKnown RBP23.53■■□□□ 1.36
TRIM3-201ENST00000345851 HSD17B3P37058 310 aa23.53■■□□□ 1.36
TRIM3-201ENST00000345851 MECOMQ03112 1051 aa23.53■■□□□ 1.36
TRIM3-201ENST00000345851 EHHADHQ08426 723 aa23.53■■□□□ 1.36
TRIM3-201ENST00000345851 ZSCAN29Q8IWY8 852 aaPredicted RBP23.53■■□□□ 1.36
TRIM3-201ENST00000345851 KBTBD4Q9NVX7 518 aa23.53■■□□□ 1.36
TRIM3-201ENST00000345851 SIK3Q9Y2K2 1263 aa23.53■■□□□ 1.36
TRIM3-201ENST00000345851 SKAP2O75563 359 aaPredicted RBP23.53■■□□□ 1.36
TRIM3-201ENST00000345851 CDC37Q16543 378 aaPredicted RBP23.53■■□□□ 1.36
TRIM3-201ENST00000345851 PTPROQ16827 1216 aa23.53■■□□□ 1.36
TRIM3-201ENST00000345851 NLRC4Q9NPP4 1024 aa23.53■■□□□ 1.36
TRIM3-201ENST00000345851 A0A1B0GUL6 1792 aa23.52■■□□□ 1.36
TRIM3-201ENST00000345851 TRAPPC3O43617 180 aa23.52■■□□□ 1.36
TRIM3-201ENST00000345851 GBP2P32456 591 aaPredicted RBP23.52■■□□□ 1.36
TRIM3-201ENST00000345851 MRPL12P52815 198 aaKnown RBP23.52■■□□□ 1.36
TRIM3-201ENST00000345851 LRCH2Q5VUJ6 765 aa23.52■■□□□ 1.36
TRIM3-201ENST00000345851 CACNA2D3Q8IZS8 1091 aa23.52■■□□□ 1.36
TRIM3-201ENST00000345851 CCDC155Q8N6L0 562 aa23.52■■□□□ 1.36
TRIM3-201ENST00000345851 RPGRQ92834 1020 aaKnown RBP23.52■■□□□ 1.36
TRIM3-201ENST00000345851 NDST4Q9H3R1 872 aa23.52■■□□□ 1.36
TRIM3-201ENST00000345851 SLC12A6Q9UHW9 1150 aa23.52■■□□□ 1.36
TRIM3-201ENST00000345851 PHF20L1A8MW92 1017 aa23.52■■□□□ 1.36
TRIM3-201ENST00000345851 LCA5LO95447 670 aa23.52■■□□□ 1.36
TRIM3-201ENST00000345851 CTNNA1P35221 906 aaKnown RBP23.52■■□□□ 1.36
TRIM3-201ENST00000345851 ENOX2Q16206 610 aaKnown RBP23.52■■□□□ 1.36
TRIM3-201ENST00000345851 CACNA2D4Q7Z3S7 1137 aa23.52■■□□□ 1.36
TRIM3-201ENST00000345851 RIOK1Q9BRS2 568 aaKnown RBP23.52■■□□□ 1.36
TRIM3-201ENST00000345851 CNOT8Q9UFF9 292 aaKnown RBP23.52■■□□□ 1.36
TRIM3-201ENST00000345851 PNPLA7Q6ZV29 1317 aa23.51■■□□□ 1.35
TRIM3-201ENST00000345851 HSPA9P38646 679 aaKnown RBP23.51■■□□□ 1.35
TRIM3-201ENST00000345851 GRAPQ13588 217 aa23.51■■□□□ 1.35
TRIM3-201ENST00000345851 GRIK5Q16478 980 aa23.51■■□□□ 1.35
TRIM3-201ENST00000345851 VWA3BQ502W6 1294 aa23.51■■□□□ 1.35
TRIM3-201ENST00000345851 GRAPLQ8TC17 118 aaPredicted RBP23.51■■□□□ 1.35
TRIM3-201ENST00000345851 SLC39A2Q9NP94 309 aa23.51■■□□□ 1.35
TRIM3-201ENST00000345851 TMCO5BA8MYB1 307 aa23.51■■□□□ 1.35
TRIM3-201ENST00000345851 PLCG1P19174 1290 aa23.51■■□□□ 1.35
TRIM3-201ENST00000345851 ERVK-9P63128 1117 aa23.51■■□□□ 1.35
TRIM3-201ENST00000345851 ANKRD2Q9GZV1 360 aa23.51■■□□□ 1.35
TRIM3-201ENST00000345851 BAIAP2L1Q9UHR4 511 aa23.51■■□□□ 1.35
TRIM3-201ENST00000345851 BAZ2AQ9UIF9 1905 aaKnown RBP23.51■■□□□ 1.35
TRIM3-201ENST00000345851 PJA2O43164 708 aa23.5■■□□□ 1.35
TRIM3-201ENST00000345851 BYSLQ13895 437 aaKnown RBP23.5■■□□□ 1.35
TRIM3-201ENST00000345851 UAP1Q16222 522 aaPredicted RBP23.5■■□□□ 1.35
TRIM3-201ENST00000345851 ACCSLQ4AC99 568 aa23.5■■□□□ 1.35
TRIM3-201ENST00000345851 NSUN4Q96CB9 384 aaKnown RBP23.5■■□□□ 1.35
TRIM3-201ENST00000345851 COL24A1Q17RW2 1714 aa23.5■■□□□ 1.35
TRIM3-201ENST00000345851 DCDC2CA8MYV0 355 aa23.5■■□□□ 1.35
TRIM3-201ENST00000345851 UBLCP1Q8WVY7 318 aaPredicted RBP23.5■■□□□ 1.35
TRIM3-201ENST00000345851 RAPGEF5Q92565 580 aa23.5■■□□□ 1.35
TRIM3-201ENST00000345851 SEMA6BQ9H3T3 888 aa23.5■■□□□ 1.35
TRIM3-201ENST00000345851 PLCB1Q9NQ66 1216 aa23.5■■□□□ 1.35
TRIM3-201ENST00000345851 NOVA2Q9UNW9 492 aaKnown RBP23.5■■□□□ 1.35
TRIM3-201ENST00000345851 ZNF844Q08AG5 666 aa23.5■■□□□ 1.35
TRIM3-201ENST00000345851 NAIF1Q69YI7 327 aaPredicted RBP23.5■■□□□ 1.35
TRIM3-201ENST00000345851 CPLX4Q7Z7G2 160 aa23.5■■□□□ 1.35
TRIM3-201ENST00000345851 CCDC50Q8IVM0 306 aa23.5■■□□□ 1.35
TRIM3-201ENST00000345851 CCDC47Q96A33 483 aaKnown RBP23.5■■□□□ 1.35
TRIM3-201ENST00000345851 HVCN1Q96D96 273 aa23.5■■□□□ 1.35
TRIM3-201ENST00000345851 TAF1DQ9H5J8 278 aaPredicted RBP23.5■■□□□ 1.35
TRIM3-201ENST00000345851 A0A1B0GUA9 196 aa23.49■■□□□ 1.35
TRIM3-201ENST00000345851 CRYMQ14894 314 aa23.49■■□□□ 1.35
TRIM3-201ENST00000345851 BLIDQ8IZY5 108 aa23.49■■□□□ 1.35
TRIM3-201ENST00000345851 TRIM9Q9C026 710 aa23.49■■□□□ 1.35
TRIM3-201ENST00000345851 TSKSQ9UJT2 592 aa23.49■■□□□ 1.35
TRIM3-201ENST00000345851 KLRC1P26715 233 aa23.49■■□□□ 1.35
TRIM3-201ENST00000345851 INF2Q27J81 1249 aa23.49■■□□□ 1.35
TRIM3-201ENST00000345851 TRIM6Q9C030 488 aaPredicted RBP23.49■■□□□ 1.35
TRIM3-201ENST00000345851 TANGO6Q9C0B7 1094 aa23.49■■□□□ 1.35
TRIM3-201ENST00000345851 GPSM2P81274 684 aa23.48■■□□□ 1.35
TRIM3-201ENST00000345851 ARID5AQ03989 594 aa23.48■■□□□ 1.35
TRIM3-201ENST00000345851 MSL1Q68DK7 614 aa23.48■■□□□ 1.35
TRIM3-201ENST00000345851 HIBCHQ6NVY1 386 aaPredicted RBP23.48■■□□□ 1.35
TRIM3-201ENST00000345851 BAP1Q92560 729 aa23.48■■□□□ 1.35
TRIM3-201ENST00000345851 RNF14Q9UBS8 474 aa23.48■■□□□ 1.35
TRIM3-201ENST00000345851 APBA3O96018 575 aa23.48■■□□□ 1.35
TRIM3-201ENST00000345851 INPP4AQ96PE3 977 aaPredicted RBP23.48■■□□□ 1.35
TRIM3-201ENST00000345851 CCDC194A0A1B0GVG4 234 aa23.47■■□□□ 1.35
TRIM3-201ENST00000345851 PPP2R2AP63151 447 aa23.47■■□□□ 1.35
TRIM3-201ENST00000345851 DIXDC1Q155Q3 683 aa23.47■■□□□ 1.35
TRIM3-201ENST00000345851 FAM47AQ5JRC9 791 aa23.47■■□□□ 1.35
TRIM3-201ENST00000345851 KIAA0895Q8NCT3 520 aa23.47■■□□□ 1.35
TRIM3-201ENST00000345851 NEUROG2Q9H2A3 272 aa23.47■■□□□ 1.35
TRIM3-201ENST00000345851 GOLPH3Q9H4A6 298 aa23.47■■□□□ 1.35
TRIM3-201ENST00000345851 CACNA1SQ13698 1873 aa23.47■■□□□ 1.35
TRIM3-201ENST00000345851 H0YGN5 161 aa23.47■■□□□ 1.35
TRIM3-201ENST00000345851 RGL2O15211 777 aa23.47■■□□□ 1.35
TRIM3-201ENST00000345851 CALM1P0DP23 149 aa23.47■■□□□ 1.35
TRIM3-201ENST00000345851 CALM2P0DP24 149 aa23.47■■□□□ 1.35
TRIM3-201ENST00000345851 CALM3P0DP25 149 aa23.47■■□□□ 1.35
TRIM3-201ENST00000345851 TNNC1P63316 161 aa23.47■■□□□ 1.35
TRIM3-201ENST00000345851 PPP1R7Q15435 360 aa23.47■■□□□ 1.35
TRIM3-201ENST00000345851 PFKFB3Q16875 520 aaPredicted RBP23.47■■□□□ 1.35
TRIM3-201ENST00000345851 ASTE1Q2TB18 679 aaPredicted RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms