RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 MLXIPQ9HAP2 919 aa16.49■□□□□ 0.23
VIPAS39-202ENST00000343765 JADE2Q9NQC1 790 aa16.49■□□□□ 0.23
VIPAS39-202ENST00000343765 GREB1LQ9C091 1923 aaPredicted RBP16.49■□□□□ 0.23
VIPAS39-202ENST00000343765 SPDYE3A6NKU9 549 aa16.49■□□□□ 0.23
VIPAS39-202ENST00000343765 ATP8B1O43520 1251 aa16.49■□□□□ 0.23
VIPAS39-202ENST00000343765 USP11P51784 963 aa16.49■□□□□ 0.23
VIPAS39-202ENST00000343765 PSMC6P62333 389 aa16.49■□□□□ 0.23
VIPAS39-202ENST00000343765 PABPC4Q13310 644 aaKnown RBP eCLIP16.49■□□□□ 0.23
VIPAS39-202ENST00000343765 RRP1BQ14684 758 aaKnown RBP16.49■□□□□ 0.23
VIPAS39-202ENST00000343765 SYDE2Q5VT97 1194 aa16.49■□□□□ 0.23
VIPAS39-202ENST00000343765 TATDN1Q6P1N9 297 aa16.49■□□□□ 0.23
VIPAS39-202ENST00000343765 EHBP1Q8NDI1 1231 aa16.49■□□□□ 0.23
VIPAS39-202ENST00000343765 CAGE1Q8TC20 777 aa16.49■□□□□ 0.23
VIPAS39-202ENST00000343765 SECISBP2LQ93073 1101 aaKnown RBP16.49■□□□□ 0.23
VIPAS39-202ENST00000343765 NAP1L4Q99733 375 aaKnown RBP16.49■□□□□ 0.23
VIPAS39-202ENST00000343765 GLT8D2Q9H1C3 349 aa16.49■□□□□ 0.23
VIPAS39-202ENST00000343765 SIPA1L1O43166 1804 aa16.48■□□□□ 0.23
VIPAS39-202ENST00000343765 ERICH4A6NGS2 130 aa16.48■□□□□ 0.23
VIPAS39-202ENST00000343765 POTEB2H3BUK9 544 aa16.48■□□□□ 0.23
VIPAS39-202ENST00000343765 CYP4A11Q02928 519 aa16.48■□□□□ 0.23
VIPAS39-202ENST00000343765 ZCWPW2Q504Y3 356 aa16.48■□□□□ 0.23
VIPAS39-202ENST00000343765 HYIQ5T013 277 aa16.48■□□□□ 0.23
VIPAS39-202ENST00000343765 CSRNP1Q96S65 589 aa16.48■□□□□ 0.23
VIPAS39-202ENST00000343765 PCDHA13Q9Y5I0 950 aa16.48■□□□□ 0.23
VIPAS39-202ENST00000343765 ARFGEF1Q9Y6D6 1849 aa16.48■□□□□ 0.23
VIPAS39-202ENST00000343765 FAM86B1E9PN63 330 aa16.48■□□□□ 0.23
VIPAS39-202ENST00000343765 FAM86B2P0C5J1 330 aa16.48■□□□□ 0.23
VIPAS39-202ENST00000343765 TDRD12Q587J7 1177 aaKnown RBP16.48■□□□□ 0.23
VIPAS39-202ENST00000343765 BEND6Q5SZJ8 279 aaPredicted RBP16.48■□□□□ 0.23
VIPAS39-202ENST00000343765 SLC30A10Q6XR72 485 aa16.48■□□□□ 0.23
VIPAS39-202ENST00000343765 CATSPER3Q86XQ3 398 aa16.48■□□□□ 0.23
VIPAS39-202ENST00000343765 ANKRD13CQ8N6S4 541 aa16.48■□□□□ 0.23
VIPAS39-202ENST00000343765 CYP2W1Q8TAV3 490 aa16.48■□□□□ 0.23
VIPAS39-202ENST00000343765 PRMT6Q96LA8 375 aaPredicted RBP16.48■□□□□ 0.23
VIPAS39-202ENST00000343765 PDGFDQ9GZP0 370 aaPredicted RBP16.48■□□□□ 0.23
VIPAS39-202ENST00000343765 RAB21Q9UL25 225 aa16.48■□□□□ 0.23
VIPAS39-202ENST00000343765 ARSHQ5FYA8 562 aa16.47■□□□□ 0.23
VIPAS39-202ENST00000343765 RBM26Q5T8P6 1007 aaKnown RBP16.47■□□□□ 0.23
VIPAS39-202ENST00000343765 SLFN12Q8IYM2 578 aa16.47■□□□□ 0.23
VIPAS39-202ENST00000343765 ETNPPLQ8TBG4 499 aa16.47■□□□□ 0.23
VIPAS39-202ENST00000343765 SCFD1Q8WVM8 642 aa16.47■□□□□ 0.23
VIPAS39-202ENST00000343765 SERPINA10Q9UK55 444 aa16.47■□□□□ 0.23
VIPAS39-202ENST00000343765 CAPN6Q9Y6Q1 641 aa16.47■□□□□ 0.23
VIPAS39-202ENST00000343765 A0A1W2PRG0 241 aa16.47■□□□□ 0.23
VIPAS39-202ENST00000343765 TCP10L2B9ZVM9 353 aa16.47■□□□□ 0.23
VIPAS39-202ENST00000343765 MOCS3O95396 460 aa16.47■□□□□ 0.23
VIPAS39-202ENST00000343765 BMP3P12645 472 aa16.47■□□□□ 0.23
VIPAS39-202ENST00000343765 CASP5P51878 434 aa16.47■□□□□ 0.23
VIPAS39-202ENST00000343765 CDK17Q00537 523 aa16.47■□□□□ 0.23
VIPAS39-202ENST00000343765 KCNMA1Q12791 1236 aa16.47■□□□□ 0.23
VIPAS39-202ENST00000343765 AP3B2Q13367 1082 aa16.47■□□□□ 0.23
VIPAS39-202ENST00000343765 ENOX2Q16206 610 aaKnown RBP16.47■□□□□ 0.23
VIPAS39-202ENST00000343765 BAP1Q92560 729 aa16.47■□□□□ 0.23
VIPAS39-202ENST00000343765 PSMB7Q99436 277 aa16.47■□□□□ 0.23
VIPAS39-202ENST00000343765 LSM14BQ9BX40 385 aaKnown RBP16.47■□□□□ 0.23
VIPAS39-202ENST00000343765 PCDHA2Q9Y5H9 948 aa16.47■□□□□ 0.23
VIPAS39-202ENST00000343765 CLRN2A0PK11 232 aa16.46■□□□□ 0.23
VIPAS39-202ENST00000343765 ERLIN1O75477 346 aa16.46■□□□□ 0.23
VIPAS39-202ENST00000343765 ECE1P42892 770 aa16.46■□□□□ 0.23
VIPAS39-202ENST00000343765 GYS2P54840 703 aa16.46■□□□□ 0.23
VIPAS39-202ENST00000343765 SLC12A3P55017 1021 aa16.46■□□□□ 0.23
VIPAS39-202ENST00000343765 GFPT1Q06210 699 aaPredicted RBP16.46■□□□□ 0.23
VIPAS39-202ENST00000343765 PAPD7Q5XG87 772 aaKnown RBP16.46■□□□□ 0.23
VIPAS39-202ENST00000343765 HAUS3Q68CZ6 603 aa16.46■□□□□ 0.23
VIPAS39-202ENST00000343765 EMILIN3Q9NT22 766 aa16.46■□□□□ 0.23
VIPAS39-202ENST00000343765 ABCB11O95342 1321 aa16.46■□□□□ 0.23
VIPAS39-202ENST00000343765 CYP3A7-CYP3A51PA0A087WV96 503 aa16.46■□□□□ 0.23
VIPAS39-202ENST00000343765 USO1O60763 962 aaKnown RBP16.46■□□□□ 0.23
VIPAS39-202ENST00000343765 CYP3A7P24462 503 aa16.46■□□□□ 0.23
VIPAS39-202ENST00000343765 HNRNPH3P31942 346 aaKnown RBP16.46■□□□□ 0.23
VIPAS39-202ENST00000343765 ZNF76P36508 570 aa16.46■□□□□ 0.23
VIPAS39-202ENST00000343765 ARID5AQ03989 594 aa16.46■□□□□ 0.23
VIPAS39-202ENST00000343765 SLX4Q8IY92 1834 aa16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 PLSCR1O15162 318 aa16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 ZMYND10O75800 440 aa16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 HDLBPQ00341 1268 aaKnown RBP16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 SPIRE1Q08AE8 756 aa16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 PDXDC1Q6P996 788 aa16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 ZNF662Q6ZS27 426 aa16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 FLAD1Q8NFF5 587 aa16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 LENG9Q96B70 501 aa16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 IQCDQ96DY2 449 aa16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 TSGA10Q9BZW7 698 aa16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 H3BQF6 201 aa16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 POLR2FP61218 127 aaKnown RBP16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 GMCL1P1Q8NEA9 526 aa16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 GMCL1Q96IK5 515 aa16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 ZFP91Q96JP5 570 aaPredicted RBP16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 PURBQ96QR8 312 aaKnown RBP16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 HINFPQ9BQA5 517 aa16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 MRIQ9BWK5 157 aa16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 BCAS3Q9H6U6 928 aa16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 PDE11AQ9HCR9 933 aa16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 SCAF8Q9UPN6 1271 aaKnown RBP16.45■□□□□ 0.22
VIPAS39-202ENST00000343765 PDE2AO00408 941 aaPredicted RBP16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 OPLAHO14841 1288 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 PPIP5K2O43314 1243 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 EPS15P42566 896 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms