RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 MIF4GDA9UHW6 222 aaKnown RBP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 HNRNPH1P31943 449 aaKnown RBP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 GUCY1A3Q02108 690 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 DYNC1I2Q13409 638 aaKnown RBP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 GSPT2Q8IYD1 628 aaKnown RBP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 TEKT1Q969V4 418 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 AIFM3Q96NN9 605 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 EDEM3Q9BZQ6 932 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 KCNG1Q9UIX4 513 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 HEG1Q9ULI3 1381 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 C6orf229H3BNL8 230 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 IPO5O00410 1097 aaKnown RBP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 ZNF185O15231 689 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 DKC1O60832 514 aaKnown RBP eCLIP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 MCAMP43121 646 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 CAPRIN2Q6IMN6 1127 aaKnown RBP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 KDM7AQ6ZMT4 941 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 AFAP1L2Q8N4X5 818 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 GABPB2Q8TAK5 448 aaPredicted RBP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 TMEM60Q9H2L4 133 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 GREM2Q9H772 168 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 KIAA1024Q9UPX6 916 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 ADORA1P30542 326 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 HSPA9P38646 679 aaKnown RBP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 FMR1Q06787 632 aaKnown RBP eCLIP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 CDC37Q16543 378 aaPredicted RBP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 ALKBH5Q6P6C2 394 aaKnown RBP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 MRRFQ96E11 262 aaKnown RBP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 CHP1Q99653 195 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 PITPNM3Q9BZ71 974 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 GPCPD1Q9NPB8 672 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 FGFR1OP2Q9NVK5 253 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 CDHR2Q9BYE9 1310 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 IGKV5-2P06315 115 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 COG7P83436 770 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 SLC18A3Q16572 532 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 NT5DC1Q5TFE4 455 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 ARHGAP18Q8N392 663 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 GPKOWQ92917 476 aaPredicted RBP eCLIP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 GCNT4Q9P109 453 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 ABCD1P33897 745 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 GFPT1Q06210 699 aaPredicted RBP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 SEC16BQ96JE7 1060 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 EYA3Q99504 573 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 CTDNEP1O95476 244 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 SRGNP10124 158 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 CDC27P30260 824 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 SNX16P57768 344 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 CDR2Q01850 454 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 TMTC3Q6ZXV5 915 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 TBCKQ8TEA7 893 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 PRMT1Q99873 361 aaKnown RBP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 AP1M1Q9BXS5 423 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 SH2D4AQ9H788 454 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 RAB21Q9UL25 225 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 TXNDC9O14530 226 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 CCND1P24385 295 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 EPS15L1Q9UBC2 864 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 FXR1P51114 621 aaKnown RBP eCLIP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 NR1H3Q13133 447 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 PAPD7Q5XG87 772 aaKnown RBP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 TRAPPC11Q7Z392 1133 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 PCGF5Q86SE9 256 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 HAUS1Q96CS2 278 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 SAP30BPQ9UHR5 308 aaKnown RBP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 MROH7-TTC4A0A0A0MT08 1334 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 HSPA1LP34931 641 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 PDCD2Q16342 344 aaPredicted RBP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 RABL6Q3YEC7 729 aaPredicted RBP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 VCPKMTQ9H867 229 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 ATXN2Q99700 1313 aaKnown RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 MROH1Q8NDA8 1641 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 SSU72P8A0A1W2PR75 194 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 TRIM49BA6NDI0 452 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 LRRIQ3A6PVS8 624 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 DEUP1Q05D60 604 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 HADHQ16836 314 aaKnown RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 TRMT1LQ7Z2T5 733 aaKnown RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 MXD3Q9BW11 206 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 HPSEQ9Y251 543 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 AKAP12Q02952 1782 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 NEDD4P46934 1319 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 RHOBTB3O94955 611 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 GAP43P17677 238 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 PHKA1P46020 1223 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 POLE2P56282 527 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 PFKFB3Q16875 520 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 MEX3CQ5U5Q3 659 aaKnown RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 EPM2AIP1Q7L775 607 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 MMS19Q96T76 1030 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 MPHOSPH6Q99547 160 aaKnown RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 IL25Q9H293 177 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 KDM4CQ9H3R0 1056 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 DONSONQ9NYP3 566 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 NOC2LQ9Y3T9 749 aaKnown RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 ERBB3P21860 1342 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 H7C1W4 665 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 ASPRV1Q53RT3 343 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 GPATCH4Q5T3I0 446 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms