RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 C16orf70Q9BSU1 422 aa20.72■□□□□ 0.91
MUC1-204ENST00000343256 TCP11L1Q9NUJ3 509 aa20.72■□□□□ 0.91
MUC1-204ENST00000343256 ABCB11O95342 1321 aa20.72■□□□□ 0.91
MUC1-204ENST00000343256 CACNA1HO95180 2353 aa20.72■□□□□ 0.91
MUC1-204ENST00000343256 SMIM10L2AP0DMW4 78 aa20.71■□□□□ 0.91
MUC1-204ENST00000343256 SMIM10L2BP0DMW5 78 aa20.71■□□□□ 0.91
MUC1-204ENST00000343256 RRP1P56182 461 aaKnown RBP20.71■□□□□ 0.91
MUC1-204ENST00000343256 CAMK1Q14012 370 aa20.71■□□□□ 0.91
MUC1-204ENST00000343256 ADGRD2Q7Z7M1 963 aa20.71■□□□□ 0.91
MUC1-204ENST00000343256 PXMP2Q9NR77 195 aa20.71■□□□□ 0.91
MUC1-204ENST00000343256 CLEC1BQ9P126 229 aa20.71■□□□□ 0.91
MUC1-204ENST00000343256 ADGRA3Q8IWK6 1321 aa20.71■□□□□ 0.91
MUC1-204ENST00000343256 PLXNA3P51805 1871 aa20.71■□□□□ 0.91
MUC1-204ENST00000343256 SPTBN4Q9H254 2564 aa20.7■□□□□ 0.9
MUC1-204ENST00000343256 MYO15AQ9UKN7 3530 aa20.7■□□□□ 0.9
MUC1-204ENST00000343256 H0Y858 1186 aa20.7■□□□□ 0.9
MUC1-204ENST00000343256 RGS20O76081 388 aa20.7■□□□□ 0.9
MUC1-204ENST00000343256 EYA4O95677 639 aa20.7■□□□□ 0.9
MUC1-204ENST00000343256 GGPS1O95749 300 aa20.7■□□□□ 0.9
MUC1-204ENST00000343256 MMP1P03956 469 aa20.7■□□□□ 0.9
MUC1-204ENST00000343256 MYCLP12524 364 aaPredicted RBP20.7■□□□□ 0.9
MUC1-204ENST00000343256 HNRNPUQ00839 825 aaKnown RBP eCLIP20.7■□□□□ 0.9
MUC1-204ENST00000343256 SIGLEC14Q08ET2 396 aa20.7■□□□□ 0.9
MUC1-204ENST00000343256 CELF3Q5SZQ8 465 aaKnown RBP20.7■□□□□ 0.9
MUC1-204ENST00000343256 RNPEPQ9H4A4 650 aa20.7■□□□□ 0.9
MUC1-204ENST00000343256 TLR9Q9NR96 1032 aa20.7■□□□□ 0.9
MUC1-204ENST00000343256 PTPRZ1P23471 2315 aaPredicted RBP20.7■□□□□ 0.9
MUC1-204ENST00000343256 AVPR2P30518 371 aa20.69■□□□□ 0.9
MUC1-204ENST00000343256 HOXC8P31273 242 aa20.69■□□□□ 0.9
MUC1-204ENST00000343256 SP2Q02086 613 aa20.69■□□□□ 0.9
MUC1-204ENST00000343256 MCF2L2Q86YR7 1114 aa20.69■□□□□ 0.9
MUC1-204ENST00000343256 PI4K2BQ8TCG2 481 aa20.69■□□□□ 0.9
MUC1-204ENST00000343256 APBB2Q92870 758 aa20.69■□□□□ 0.9
MUC1-204ENST00000343256 ASIC4Q96FT7 647 aa20.69■□□□□ 0.9
MUC1-204ENST00000343256 ZFP91Q96JP5 570 aaPredicted RBP20.69■□□□□ 0.9
MUC1-204ENST00000343256 RC3H2Q9HBD1 1191 aaKnown RBP20.69■□□□□ 0.9
MUC1-204ENST00000343256 RWDD3Q9Y3V2 267 aa20.69■□□□□ 0.9
MUC1-204ENST00000343256 H3BRB1 525 aa20.68■□□□□ 0.9
MUC1-204ENST00000343256 DNAJB1P25685 340 aa20.68■□□□□ 0.9
MUC1-204ENST00000343256 CBX2Q14781 532 aaPredicted RBP20.68■□□□□ 0.9
MUC1-204ENST00000343256 SMRP1Q8NCR6 262 aa20.68■□□□□ 0.9
MUC1-204ENST00000343256 GPKOWQ92917 476 aaPredicted RBP eCLIP20.68■□□□□ 0.9
MUC1-204ENST00000343256 CLP1Q92989 425 aaKnown RBP20.68■□□□□ 0.9
MUC1-204ENST00000343256 RPGRIP1Q96KN7 1286 aa20.68■□□□□ 0.9
MUC1-204ENST00000343256 TUT1Q9H6E5 874 aaKnown RBP20.68■□□□□ 0.9
MUC1-204ENST00000343256 BCAS3Q9H6U6 928 aa20.68■□□□□ 0.9
MUC1-204ENST00000343256 BARX2Q9UMQ3 279 aaPredicted RBP20.68■□□□□ 0.9
MUC1-204ENST00000343256 PLAGL2Q9UPG8 496 aa20.68■□□□□ 0.9
MUC1-204ENST00000343256 CFBP00751 764 aa20.67■□□□□ 0.9
MUC1-204ENST00000343256 UBA1P22314 1058 aaKnown RBP20.67■□□□□ 0.9
MUC1-204ENST00000343256 BTG3Q14201 252 aaPredicted RBP20.67■□□□□ 0.9
MUC1-204ENST00000343256 QRICH1Q2TAL8 776 aa20.67■□□□□ 0.9
MUC1-204ENST00000343256 GPATCH4Q5T3I0 446 aaKnown RBP20.67■□□□□ 0.9
MUC1-204ENST00000343256 ASCL5Q7RTU5 278 aa20.67■□□□□ 0.9
MUC1-204ENST00000343256 ADGRF4Q8IZF3 695 aa20.67■□□□□ 0.9
MUC1-204ENST00000343256 OTUD7AQ8TE49 926 aaPredicted RBP20.67■□□□□ 0.9
MUC1-204ENST00000343256 ZKSCAN3Q9BRR0 538 aa20.67■□□□□ 0.9
MUC1-204ENST00000343256 SETD4Q9NVD3 440 aa20.67■□□□□ 0.9
MUC1-204ENST00000343256 USP15Q9Y4E8 981 aaPredicted RBP20.67■□□□□ 0.9
MUC1-204ENST00000343256 SUPT16HQ9Y5B9 1047 aaKnown RBP20.67■□□□□ 0.9
MUC1-204ENST00000343256 CAND2O75155 1236 aa20.66■□□□□ 0.9
MUC1-204ENST00000343256 LGALS2P05162 132 aa20.66■□□□□ 0.9
MUC1-204ENST00000343256 HSPD1P10809 573 aaKnown RBP20.66■□□□□ 0.9
MUC1-204ENST00000343256 HAND2P61296 217 aa20.66■□□□□ 0.9
MUC1-204ENST00000343256 COASYQ13057 564 aa20.66■□□□□ 0.9
MUC1-204ENST00000343256 RBM23Q86U06 439 aaKnown RBP20.66■□□□□ 0.9
MUC1-204ENST00000343256 TTC14Q96N46 770 aa20.66■□□□□ 0.9
MUC1-204ENST00000343256 MAF1Q9H063 256 aa20.66■□□□□ 0.9
MUC1-204ENST00000343256 CHMP4BQ9H444 224 aaKnown RBP20.66■□□□□ 0.9
MUC1-204ENST00000343256 MRPL11Q9Y3B7 192 aaKnown RBP20.66■□□□□ 0.9
MUC1-204ENST00000343256 MYH6P13533 1939 aa20.66■□□□□ 0.9
MUC1-204ENST00000343256 TTC41PQ6P2S7 1318 aa20.65■□□□□ 0.9
MUC1-204ENST00000343256 GLP2RO95838 553 aa20.65■□□□□ 0.9
MUC1-204ENST00000343256 PDGFBP01127 241 aaPredicted RBP20.65■□□□□ 0.9
MUC1-204ENST00000343256 FGAP02671 866 aa20.65■□□□□ 0.9
MUC1-204ENST00000343256 GHRP10912 638 aa20.65■□□□□ 0.9
MUC1-204ENST00000343256 NRIP1P48552 1158 aa20.65■□□□□ 0.9
MUC1-204ENST00000343256 MIER1Q8N108 512 aa20.65■□□□□ 0.9
MUC1-204ENST00000343256 EFHBQ8N7U6 833 aa20.65■□□□□ 0.9
MUC1-204ENST00000343256 IL31RAQ8NI17 732 aa20.65■□□□□ 0.9
MUC1-204ENST00000343256 ZNF689Q96CS4 500 aaPredicted RBP20.65■□□□□ 0.9
MUC1-204ENST00000343256 PDCD2LQ9BRP1 358 aa20.65■□□□□ 0.9
MUC1-204ENST00000343256 DCTPP1Q9H773 170 aa20.65■□□□□ 0.9
MUC1-204ENST00000343256 MLXIPQ9HAP2 919 aa20.65■□□□□ 0.9
MUC1-204ENST00000343256 VAT1LQ9HCJ6 419 aa20.65■□□□□ 0.9
MUC1-204ENST00000343256 PCDHGC5Q9Y5F6 944 aa20.65■□□□□ 0.9
MUC1-204ENST00000343256 KIAA1671Q9BY89 1806 aa20.64■□□□□ 0.9
MUC1-204ENST00000343256 CACNA1AO00555 2505 aa20.64■□□□□ 0.9
MUC1-204ENST00000343256 ITGB1P05556 798 aa20.64■□□□□ 0.89
MUC1-204ENST00000343256 ALX1Q15699 326 aa20.64■□□□□ 0.89
MUC1-204ENST00000343256 PPP2R3CQ969Q6 453 aa20.64■□□□□ 0.89
MUC1-204ENST00000343256 PHF7Q9BWX1 381 aaPredicted RBP20.64■□□□□ 0.89
MUC1-204ENST00000343256 PLVAPQ9BX97 442 aa20.64■□□□□ 0.89
MUC1-204ENST00000343256 IRF2BPLQ9H1B7 796 aa20.64■□□□□ 0.89
MUC1-204ENST00000343256 MRPL42Q9Y6G3 142 aaKnown RBP20.64■□□□□ 0.89
MUC1-204ENST00000343256 CCDC171Q6TFL3 1326 aa20.63■□□□□ 0.89
MUC1-204ENST00000343256 ENPP3O14638 875 aa20.63■□□□□ 0.89
MUC1-204ENST00000343256 OPLAHO14841 1288 aa20.63■□□□□ 0.89
MUC1-204ENST00000343256 DHX16O60231 1041 aaKnown RBP20.63■□□□□ 0.89
MUC1-204ENST00000343256 KDM4AO75164 1064 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms