RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 USP17L5A8MUK1 530 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 PRCPP42785 496 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 APBA1Q02410 837 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 CROCCP2Q86T23 111 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 PARP9Q8IXQ6 854 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 RSAD2Q8WXG1 361 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 MAGOHBQ96A72 148 aaKnown RBP8.77□□□□□ -1.01
UBE4B-202ENST00000343090 GBP5Q96PP8 586 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 GCNT4Q9P109 453 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 GSG1L2A8MUP6 293 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 PLTPP55058 493 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 CDAN1Q8IWY9 1227 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 IWS1Q96ST2 819 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 FUT8Q9BYC5 575 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 RIC8AQ9NPQ8 531 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 PSMC2P35998 433 aaKnown RBP8.77□□□□□ -1.01
UBE4B-202ENST00000343090 DMP1Q13316 513 aaPredicted RBP8.77□□□□□ -1.01
UBE4B-202ENST00000343090 MUM1Q2TAK8 710 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 BRINP3Q76B58 766 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 PALM2Q8IXS6 379 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 CELF1Q92879 486 aaKnown RBP8.77□□□□□ -1.01
UBE4B-202ENST00000343090 FUCA2Q9BTY2 467 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 ABHD10Q9NUJ1 306 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 STK17AQ9UEE5 414 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 ADAMTS1Q9UHI8 967 aa8.77□□□□□ -1.01
UBE4B-202ENST00000343090 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.76□□□□□ -1.01
UBE4B-202ENST00000343090 H3BQF6 201 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 GCFC2P16383 781 aaKnown RBP8.76□□□□□ -1.01
UBE4B-202ENST00000343090 NR1D1P20393 614 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 SLC8A3P57103 927 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 CTTNQ14247 550 aaKnown RBP8.76□□□□□ -1.01
UBE4B-202ENST00000343090 MTF1Q14872 753 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 GEN1Q17RS7 908 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 SMIM5Q71RC9 77 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 BRIP1Q9BX63 1249 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 TMEM260Q9NX78 707 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 MINPP1Q9UNW1 487 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 HNRNPDLO14979 420 aaKnown RBP8.76□□□□□ -1.01
UBE4B-202ENST00000343090 FOSP01100 380 aaPredicted RBP8.76□□□□□ -1.01
UBE4B-202ENST00000343090 SLCO1A2P46721 670 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 MRPS9P82933 396 aaKnown RBP8.76□□□□□ -1.01
UBE4B-202ENST00000343090 SEPT14Q6ZU15 432 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 CCDC197Q8NCU1 140 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 MAIP1Q8WWC4 291 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 MLXIPQ9HAP2 919 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 CD248Q9HCU0 757 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 MYO3AQ8NEV4 1616 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 FAM205CA6NFA0 338 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 MYO1FO00160 1098 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 TRIM37O94972 964 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 ATF2P15336 505 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 EXOSC10Q01780 885 aaKnown RBP8.76□□□□□ -1.01
UBE4B-202ENST00000343090 CCDC62Q6P9F0 684 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 TSC22D3Q99576 134 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 TMEM47Q9BQJ4 181 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 PALLDQ8WX93 1383 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 FAM196BA6NMK8 535 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 LMNB1P20700 586 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 TMOD1P28289 359 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 PIK3CAP42336 1068 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 PPP2R5CQ13362 524 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 CDC37Q16543 378 aaPredicted RBP8.76□□□□□ -1.01
UBE4B-202ENST00000343090 PFKFB3Q16875 520 aaPredicted RBP8.76□□□□□ -1.01
UBE4B-202ENST00000343090 LRRC23Q53EV4 343 aaPredicted RBP8.76□□□□□ -1.01
UBE4B-202ENST00000343090 ARL6IP4Q66PJ3 421 aaKnown RBP8.76□□□□□ -1.01
UBE4B-202ENST00000343090 VPS52Q8N1B4 723 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 CCDC17Q96LX7 622 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 SUDS3Q9H7L9 328 aaPredicted RBP8.76□□□□□ -1.01
UBE4B-202ENST00000343090 HOMER3Q9NSC5 361 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 HDAC6Q9UBN7 1215 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 ZNF148Q9UQR1 794 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 TRPC6Q9Y210 931 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 SPATA31A3Q5VYP0 1347 aa8.76□□□□□ -1.01
UBE4B-202ENST00000343090 NSFP46459 744 aaKnown RBP8.75□□□□□ -1.01
UBE4B-202ENST00000343090 TAF11Q15544 211 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 FOXR1Q6PIV2 292 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 ZNF653Q96CK0 615 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 MMS19Q96T76 1030 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 UBE2TQ9NPD8 197 aaPredicted RBP8.75□□□□□ -1.01
UBE4B-202ENST00000343090 BZW2Q9Y6E2 419 aaKnown RBP8.75□□□□□ -1.01
UBE4B-202ENST00000343090 POC1B-GALNT4F8VUJ3 575 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 PGRMC1O00264 195 aaKnown RBP8.75□□□□□ -1.01
UBE4B-202ENST00000343090 POLGP54098 1239 aaPredicted RBP8.75□□□□□ -1.01
UBE4B-202ENST00000343090 POLE2P56282 527 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 TRIP13Q15645 432 aaPredicted RBP8.75□□□□□ -1.01
UBE4B-202ENST00000343090 GNPTABQ3T906 1256 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 FAM133BQ5BKY9 247 aaKnown RBP8.75□□□□□ -1.01
UBE4B-202ENST00000343090 ALS2CLQ60I27 953 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 MIGA2Q7L4E1 593 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 METTL16Q86W50 562 aaKnown RBP8.75□□□□□ -1.01
UBE4B-202ENST00000343090 RNF168Q8IYW5 571 aaPredicted RBP8.75□□□□□ -1.01
UBE4B-202ENST00000343090 RILPQ96NA2 401 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 ISCA1Q9BUE6 129 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 ZNF335Q9H4Z2 1342 aaPredicted RBP8.75□□□□□ -1.01
UBE4B-202ENST00000343090 ADGRL3Q9HAR2 1447 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 STK36Q9NRP7 1315 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 SEPT9Q9UHD8 586 aaPredicted RBP8.75□□□□□ -1.01
UBE4B-202ENST00000343090 NFU1Q9UMS0 254 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 AK9Q5TCS8 1911 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 CPDO75976 1380 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms