RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 NTSR2O95665 410 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 CCDC63Q8NA47 563 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 L2HGDHQ9H9P8 463 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 C1orf112Q9NSG2 853 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 TMOD4Q9NZQ9 345 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 PLTPP55058 493 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 VSNL1P62760 191 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 MYL7Q01449 175 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 DHX9Q08211 1270 aaKnown RBP7.84□□□□□ -1.15
VCAN-202ENST00000342785 COL9A3Q14050 684 aaPredicted RBP7.84□□□□□ -1.15
VCAN-202ENST00000342785 SBK1Q52WX2 424 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 ANKRD40Q6AI12 368 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 DEPTORQ8TB45 409 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 PARVGQ9HBI0 331 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 PLCB1Q9NQ66 1216 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 NFU1Q9UMS0 254 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 GINS2Q9Y248 185 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 SFI1A8K8P3 1242 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 TRIM37O94972 964 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 LACTBP83111 547 aaPredicted RBP7.84□□□□□ -1.15
VCAN-202ENST00000342785 AOC3Q16853 763 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 TBC1D10BQ4KMP7 808 aaPredicted RBP7.84□□□□□ -1.15
VCAN-202ENST00000342785 SYDE2Q5VT97 1194 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 PPP4R3CPQ6ZMV5 832 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 DIP2AQ14689 1571 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 NNTQ13423 1086 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 TNFAIP1Q13829 316 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 NTRK3Q16288 839 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 CEP128Q6ZU80 1094 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 PROM2Q8N271 834 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 MGARPQ8TDB4 240 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 RAD54LQ92698 747 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 HPS3Q969F9 1004 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 SPZ1Q9BXG8 430 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 CAPN11Q9UMQ6 739 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 PCDHA6Q9UN73 950 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 PCDHA8Q9Y5H6 950 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 POTEB3A0JP26 581 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 POTECB2RU33 542 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 MYO1FO00160 1098 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 HNRNPDLO14979 420 aaKnown RBP7.84□□□□□ -1.15
VCAN-202ENST00000342785 ADCY8P40145 1251 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 SEMA3FQ13275 785 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 NFIXQ14938 502 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 POTEBQ6S5H4 581 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 SFR1Q86XK3 245 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 MCF2L2Q86YR7 1114 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 CEP63Q96MT8 703 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 NT5C1BQ96P26 610 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 PCIF1Q9H4Z3 704 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 AKR1B1P15121 316 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 POLD1P28340 1107 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 USP14P54578 494 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 SNAP25P60880 206 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 CTTNQ14247 550 aaKnown RBP7.84□□□□□ -1.15
VCAN-202ENST00000342785 NCAPHQ15003 741 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 AZI2Q9H6S1 392 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 FAM114A2Q9NRY5 505 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 ATP8A1Q9Y2Q0 1164 aa7.84□□□□□ -1.15
VCAN-202ENST00000342785 GH2P01242 217 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 LIG4P49917 911 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 ARHGAP4P98171 946 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 KCNH2Q12809 1159 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 AP3B2Q13367 1082 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 QRICH1Q2TAL8 776 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 GNPTABQ3T906 1256 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 RASGRP2Q7LDG7 609 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 MARCH10Q8NA82 808 aaPredicted RBP7.83□□□□□ -1.16
VCAN-202ENST00000342785 SMC6Q96SB8 1091 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 TMEM60Q9H2L4 133 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 ST7Q9NRC1 585 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 CEP72Q9P209 647 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 ANKRD65E5RJM6 399 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 NOP56O00567 594 aaKnown RBP7.83□□□□□ -1.16
VCAN-202ENST00000342785 STX2P32856 288 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 NSFP46459 744 aaKnown RBP7.83□□□□□ -1.16
VCAN-202ENST00000342785 PDE6CP51160 858 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 COASYQ13057 564 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 ORC2Q13416 577 aaPredicted RBP7.83□□□□□ -1.16
VCAN-202ENST00000342785 PIGOQ8TEQ8 1089 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 GLG1Q92896 1179 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 MAK16Q9BXY0 300 aaKnown RBP7.83□□□□□ -1.16
VCAN-202ENST00000342785 BAIAP2L1Q9UHR4 511 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 TRPC5Q9UL62 973 aaPredicted RBP7.83□□□□□ -1.16
VCAN-202ENST00000342785 ATP1A1P05023 1023 aaKnown RBP7.83□□□□□ -1.16
VCAN-202ENST00000342785 MXI1P50539 228 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 ARHGEF16Q5VV41 709 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 TMEM179Q6ZVK1 233 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 REXO1L1PQ8IX06 675 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 IL17RAQ96F46 866 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 PBKQ96KB5 322 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 RHOBTB3O94955 611 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 GYPCP04921 128 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 TOB1P50616 345 aaPredicted RBP7.83□□□□□ -1.16
VCAN-202ENST00000342785 ITPK1Q13572 414 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 HHATQ5VTY9 493 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 FBXO33Q7Z6M2 555 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 POMGNT1Q8WZA1 660 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 MXD3Q9BW11 206 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 AP1M1Q9BXS5 423 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms