RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 APTXQ7Z2E3 356 aaKnown RBP13.02□□□□□ -0.32
RTN3-203ENST00000341307 METTL16Q86W50 562 aaKnown RBP13.02□□□□□ -0.32
RTN3-203ENST00000341307 PPFIBP1Q86W92 1011 aa13.02□□□□□ -0.32
RTN3-203ENST00000341307 IQCKQ8N0W5 287 aa13.02□□□□□ -0.32
RTN3-203ENST00000341307 P3H4Q92791 437 aa13.02□□□□□ -0.32
RTN3-203ENST00000341307 CAVIN3Q969G5 261 aa13.02□□□□□ -0.32
RTN3-203ENST00000341307 BRIP1Q9BX63 1249 aa13.02□□□□□ -0.32
RTN3-203ENST00000341307 OCEL1Q9H607 264 aa13.02□□□□□ -0.32
RTN3-203ENST00000341307 SAMSN1Q9NSI8 373 aaKnown RBP13.02□□□□□ -0.32
RTN3-203ENST00000341307 POLR3EQ9NVU0 708 aa13.02□□□□□ -0.32
RTN3-203ENST00000341307 GUCA1BQ9UMX6 200 aa13.02□□□□□ -0.32
RTN3-203ENST00000341307 TRAPPC3O43617 180 aa13.02□□□□□ -0.33
RTN3-203ENST00000341307 ALDH3A1P30838 453 aa13.02□□□□□ -0.33
RTN3-203ENST00000341307 FXR1P51114 621 aaKnown RBP eCLIP13.02□□□□□ -0.33
RTN3-203ENST00000341307 INHBCP55103 352 aa13.02□□□□□ -0.33
RTN3-203ENST00000341307 KIF23Q02241 960 aaPredicted RBP13.02□□□□□ -0.33
RTN3-203ENST00000341307 KRT40Q6A162 431 aa13.02□□□□□ -0.33
RTN3-203ENST00000341307 EMBQ6PCB8 327 aa13.02□□□□□ -0.33
RTN3-203ENST00000341307 PNMA8AQ86V59 439 aaPredicted RBP13.02□□□□□ -0.33
RTN3-203ENST00000341307 TRMT44Q8IYL2 757 aaKnown RBP13.02□□□□□ -0.33
RTN3-203ENST00000341307 ESR2Q92731 530 aa13.02□□□□□ -0.33
RTN3-203ENST00000341307 SLF1Q9BQI6 1058 aa13.02□□□□□ -0.33
RTN3-203ENST00000341307 LRRC1Q9BTT6 524 aa13.02□□□□□ -0.33
RTN3-203ENST00000341307 PHF24Q9UPV7 400 aa13.02□□□□□ -0.33
RTN3-203ENST00000341307 ZNF510Q9Y2H8 683 aa13.02□□□□□ -0.33
RTN3-203ENST00000341307 REXO2Q9Y3B8 237 aaKnown RBP13.02□□□□□ -0.33
RTN3-203ENST00000341307 LDHBP07195 334 aaKnown RBP13.01□□□□□ -0.33
RTN3-203ENST00000341307 USP17L8P0C7I0 530 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 MRPS25P82663 173 aaKnown RBP13.01□□□□□ -0.33
RTN3-203ENST00000341307 MXRA7P84157 204 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 SFSWAPQ12872 951 aaKnown RBP13.01□□□□□ -0.33
RTN3-203ENST00000341307 ZNF268Q14587 947 aaPredicted RBP13.01□□□□□ -0.33
RTN3-203ENST00000341307 PABPC1LQ4VXU2 614 aaKnown RBP13.01□□□□□ -0.33
RTN3-203ENST00000341307 GLE1Q53GS7 698 aaKnown RBP13.01□□□□□ -0.33
RTN3-203ENST00000341307 FAM47AQ5JRC9 791 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 ANKRD20A2Q5SQ80 823 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 ANKRD20A1Q5TYW2 823 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 ANKRD20A3Q5VUR7 823 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 SYNE3Q6ZMZ3 975 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 CACNA2D3Q8IZS8 1091 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 ENAHQ8N8S7 591 aaPredicted RBP13.01□□□□□ -0.33
RTN3-203ENST00000341307 CCDC63Q8NA47 563 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 JAKMIP2Q96AA8 810 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 ARHGEF10LQ9HCE6 1279 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.01□□□□□ -0.331e-6■■■■■ 88.9
RTN3-203ENST00000341307 POLLQ9UGP5 575 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 BACH1O14867 736 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 GYPCP04921 128 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 CNGA1P29973 690 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 SYKP43405 635 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 ADAM9Q13443 819 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 SEC23AQ15436 765 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 RTN1Q16799 776 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 FKBP15Q5T1M5 1219 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 ANO7Q6IWH7 933 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 ZNF654Q8IZM8 581 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 SPICE1Q8N0Z3 855 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 DTNBP1Q96EV8 351 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 ATP6V1G3Q96LB4 118 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 CRNKL1Q9BZJ0 848 aaKnown RBP13.01□□□□□ -0.33
RTN3-203ENST00000341307 RANBP17Q9H2T7 1088 aaKnown RBP13.01□□□□□ -0.33
RTN3-203ENST00000341307 HPSEQ9Y251 543 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 PCDHA5Q9Y5H7 936 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 PDS5AQ29RF7 1337 aaKnown RBP13.01□□□□□ -0.33
RTN3-203ENST00000341307 DUOX1Q9NRD9 1551 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 ECM29Q5VYK3 1845 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 MYH2Q9UKX2 1941 aa13.01□□□□□ -0.33
RTN3-203ENST00000341307 C10orf71Q711Q0 1435 aa13□□□□□ -0.33
RTN3-203ENST00000341307 hCG_1642624A0A1W2PR95 340 aa13□□□□□ -0.33
RTN3-203ENST00000341307 LRRD1A4D1F6 860 aa13□□□□□ -0.33
RTN3-203ENST00000341307 ZRSR2Q15696 482 aaKnown RBP13□□□□□ -0.33
RTN3-203ENST00000341307 MFSD4BQ5TF39 518 aa13□□□□□ -0.33
RTN3-203ENST00000341307 MAATS1Q7Z4T9 603 aa13□□□□□ -0.33
RTN3-203ENST00000341307 ZNF804AQ7Z570 1209 aa13□□□□□ -0.33
RTN3-203ENST00000341307 ERICH1Q86X53 443 aa13□□□□□ -0.33
RTN3-203ENST00000341307 C2CD5Q86YS7 1000 aa13□□□□□ -0.33
RTN3-203ENST00000341307 MMGT1Q8N4V1 131 aa13□□□□□ -0.33
RTN3-203ENST00000341307 TEX9Q8N6V9 391 aa13□□□□□ -0.33
RTN3-203ENST00000341307 SH3RF3Q8TEJ3 882 aaPredicted RBP13□□□□□ -0.33
RTN3-203ENST00000341307 ZSCAN10Q96SZ4 725 aaPredicted RBP13□□□□□ -0.33
RTN3-203ENST00000341307 CD209Q9NNX6 404 aa13□□□□□ -0.33
RTN3-203ENST00000341307 MCM9Q9NXL9 1143 aa13□□□□□ -0.33
RTN3-203ENST00000341307 SLC12A4Q9UP95 1085 aa13□□□□□ -0.33
RTN3-203ENST00000341307 LGR5O75473 907 aa13□□□□□ -0.33
RTN3-203ENST00000341307 YBX3P16989 372 aaKnown RBP eCLIP13□□□□□ -0.332e-9■□□□□ 10.1
RTN3-203ENST00000341307 SLC7A5Q01650 507 aa13□□□□□ -0.33
RTN3-203ENST00000341307 PPARDQ03181 441 aa13□□□□□ -0.33
RTN3-203ENST00000341307 SSRP1Q08945 709 aaKnown RBP13□□□□□ -0.33
RTN3-203ENST00000341307 TMTC1Q8IUR5 882 aa13□□□□□ -0.33
RTN3-203ENST00000341307 FANCBQ8NB91 859 aa13□□□□□ -0.33
RTN3-203ENST00000341307 CAGE1Q8TC20 777 aa13□□□□□ -0.33
RTN3-203ENST00000341307 ENOX1Q8TC92 643 aaKnown RBP13□□□□□ -0.33
RTN3-203ENST00000341307 SYT15Q9BQS2 421 aa13□□□□□ -0.33
RTN3-203ENST00000341307 IQCGQ9H095 443 aaKnown RBP13□□□□□ -0.33
RTN3-203ENST00000341307 ZWILCHQ9H900 591 aa13□□□□□ -0.33
RTN3-203ENST00000341307 GGA1Q9UJY5 639 aa13□□□□□ -0.33
RTN3-203ENST00000341307 KCNJ14Q9UNX9 436 aa13□□□□□ -0.33
RTN3-203ENST00000341307 CD2APQ9Y5K6 639 aa13□□□□□ -0.33
RTN3-203ENST00000341307 EVI5O60447 810 aa12.99□□□□□ -0.33
RTN3-203ENST00000341307 CCNG1P51959 295 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms