RNA–Protein interactions for RNA: ENST00000340513.4

TPX2-202, Transcript of TPX2, microtubule nucleation factor, humanhuman

TSL 1 (best) BASIC

Gene TPX2, Length 3,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPX2-202ENST00000340513 FNBP1Q96RU3 617 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 NRDE2Q9H7Z3 1164 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 ADGRL2O95490 1459 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 MROH1Q8NDA8 1641 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 ASMTLO95671 621 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 SHBGP04278 402 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 MARCKSP29966 332 aaPredicted RBP12.96□□□□□ -0.33
TPX2-202ENST00000340513 PCYT1AP49585 367 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 MAGOHP61326 146 aaKnown RBP12.96□□□□□ -0.33
TPX2-202ENST00000340513 TUBA1BP68363 451 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 CDK17Q00537 523 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 METTL21CQ5VZV1 264 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 TUBA1AQ71U36 451 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 MAGOHBQ96A72 148 aaKnown RBP12.96□□□□□ -0.33
TPX2-202ENST00000340513 FERMT2Q96AC1 680 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 IFT122Q9HBG6 1241 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 EPB41L5Q9HCM4 733 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 HACD3Q9P035 362 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 NOTOA8MTQ0 251 aa12.96□□□□□ -0.34
TPX2-202ENST00000340513 GSTA1P08263 222 aa12.96□□□□□ -0.34
TPX2-202ENST00000340513 PORP16435 677 aaPredicted RBP12.96□□□□□ -0.34
TPX2-202ENST00000340513 RNASE9P60153 205 aaKnown RBP12.96□□□□□ -0.34
TPX2-202ENST00000340513 BNIP1Q12981 228 aa12.96□□□□□ -0.34
TPX2-202ENST00000340513 PCSK7Q16549 785 aa12.96□□□□□ -0.34
TPX2-202ENST00000340513 LMOD2Q6P5Q4 547 aa12.96□□□□□ -0.34
TPX2-202ENST00000340513 RIC3Q7Z5B4 369 aa12.96□□□□□ -0.34
TPX2-202ENST00000340513 APPBP2Q92624 585 aa12.96□□□□□ -0.34
TPX2-202ENST00000340513 DHTKD1Q96HY7 919 aaPredicted RBP12.96□□□□□ -0.34
TPX2-202ENST00000340513 GPATCH3Q96I76 525 aa12.96□□□□□ -0.34
TPX2-202ENST00000340513 HESX1Q9UBX0 185 aa12.96□□□□□ -0.34
TPX2-202ENST00000340513 GOLGA8IPA6NC78 632 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 FAM153BP0C7A2 387 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 VAV1P15498 845 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 CTNNA1P35221 906 aaKnown RBP12.95□□□□□ -0.34
TPX2-202ENST00000340513 PAFAH1B1P43034 410 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 NCALDP61601 193 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 RESTQ13127 1097 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 PNOCQ13519 176 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 KRT71Q3SY84 523 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 FAM153CQ494X1 144 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 WDR45BQ5MNZ6 344 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 BRSK2Q8IWQ3 736 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 LRRC8CQ8TDW0 803 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 FAM153AQ9UHL3 310 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 C3P01024 1663 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 PDE2AO00408 941 aaPredicted RBP12.95□□□□□ -0.34
TPX2-202ENST00000340513 GNAI2P04899 355 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 ARFIP2P53365 341 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 NAA20P61599 178 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 PPP2R2AP63151 447 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 PPP2R5BQ15173 497 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 PPP2R2DQ66LE6 453 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.95□□□□□ -0.344e-8■■■■□ 26.2
TPX2-202ENST00000340513 SEZ6LQ9BYH1 1024 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 LSG1Q9H089 658 aaKnown RBP12.95□□□□□ -0.34
TPX2-202ENST00000340513 RNPEPL1Q9HAU8 725 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 LRCH1Q9Y2L9 728 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 REREQ9P2R6 1566 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 ABCC4O15439 1325 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 XPOTO43592 962 aaKnown RBP12.95□□□□□ -0.34
TPX2-202ENST00000340513 IDO1P14902 403 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 CARSP49589 748 aaKnown RBP12.95□□□□□ -0.34
TPX2-202ENST00000340513 ERFP50548 548 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 EAPPQ56P03 285 aaPredicted RBP12.95□□□□□ -0.34
TPX2-202ENST00000340513 OTUD7BQ6GQQ9 843 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 C7orf57Q8NEG2 295 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 SNX25Q9H3E2 840 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 SATB2Q9UPW6 733 aa12.95□□□□□ -0.34
TPX2-202ENST00000340513 AP3B1O00203 1094 aa12.94□□□□□ -0.34
TPX2-202ENST00000340513 TJP3O95049 919 aa12.94□□□□□ -0.34
TPX2-202ENST00000340513 PRKACBP22694 351 aa12.94□□□□□ -0.34
TPX2-202ENST00000340513 ERCC5P28715 1186 aaPredicted RBP12.94□□□□□ -0.34
TPX2-202ENST00000340513 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
TPX2-202ENST00000340513 BYSLQ13895 437 aaKnown RBP12.94□□□□□ -0.34
TPX2-202ENST00000340513 R3HDM1Q15032 1099 aaKnown RBP12.94□□□□□ -0.34
TPX2-202ENST00000340513 HS2ST1Q7LGA3 356 aa12.94□□□□□ -0.34
TPX2-202ENST00000340513 VPS37AQ8NEZ2 397 aa12.94□□□□□ -0.34
TPX2-202ENST00000340513 RBM46Q8TBY0 533 aaKnown RBP12.94□□□□□ -0.34
TPX2-202ENST00000340513 DTX3LQ8TDB6 740 aa12.94□□□□□ -0.34
TPX2-202ENST00000340513 DHX36Q9H2U1 1008 aaKnown RBP12.94□□□□□ -0.34
TPX2-202ENST00000340513 PSTPIP2Q9H939 334 aa12.94□□□□□ -0.34
TPX2-202ENST00000340513 INTS13Q9NVM9 706 aa12.94□□□□□ -0.34
TPX2-202ENST00000340513 ZMAT5Q9UDW3 170 aaKnown RBP12.94□□□□□ -0.34
TPX2-202ENST00000340513 PRC1O43663 620 aa12.94□□□□□ -0.34
TPX2-202ENST00000340513 STAMBPO95630 424 aa12.94□□□□□ -0.34
TPX2-202ENST00000340513 ZNF827Q17R98 1081 aa12.94□□□□□ -0.34
TPX2-202ENST00000340513 KCTD19Q17RG1 926 aaPredicted RBP12.94□□□□□ -0.34
TPX2-202ENST00000340513 IFT20Q8IY31 132 aa12.94□□□□□ -0.34
TPX2-202ENST00000340513 ENGASEQ8NFI3 743 aa12.94□□□□□ -0.34
TPX2-202ENST00000340513 TEX33O43247 280 aa12.94□□□□□ -0.34
TPX2-202ENST00000340513 ALDH1L1O75891 902 aa12.94□□□□□ -0.34
TPX2-202ENST00000340513 CSE1LP55060 971 aaKnown RBP12.94□□□□□ -0.34
TPX2-202ENST00000340513 SLC39A6Q13433 755 aa12.94□□□□□ -0.34
TPX2-202ENST00000340513 TRAPPC11Q7Z392 1133 aa12.94□□□□□ -0.34
TPX2-202ENST00000340513 PHLDB2Q86SQ0 1253 aa12.94□□□□□ -0.34
TPX2-202ENST00000340513 VSIG1Q86XK7 387 aa12.94□□□□□ -0.34
TPX2-202ENST00000340513 FMR1NBQ8N0W7 255 aaPredicted RBP12.94□□□□□ -0.34
TPX2-202ENST00000340513 SCAIQ8N9R8 606 aa12.94□□□□□ -0.34
TPX2-202ENST00000340513 RAB3IPQ96QF0 476 aaPredicted RBP12.94□□□□□ -0.34
TPX2-202ENST00000340513 RPAP3Q9H6T3 665 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms