RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 VTA1Q9NP79 307 aa8.04□□□□□ -1.12
NUP43-201ENST00000340413 A1CFQ9NQ94 594 aaKnown RBP8.04□□□□□ -1.12
NUP43-201ENST00000340413 FAM86B1E9PN63 330 aa8.04□□□□□ -1.12
NUP43-201ENST00000340413 RAD21O60216 631 aa8.04□□□□□ -1.12
NUP43-201ENST00000340413 FAM86B2P0C5J1 330 aa8.04□□□□□ -1.12
NUP43-201ENST00000340413 ERVK-9P63128 1117 aa8.04□□□□□ -1.12
NUP43-201ENST00000340413 ERVK-24P63145 666 aa8.04□□□□□ -1.12
NUP43-201ENST00000340413 IQCB1Q15051 598 aa8.04□□□□□ -1.12
NUP43-201ENST00000340413 STXBP2Q15833 593 aa8.04□□□□□ -1.12
NUP43-201ENST00000340413 MUM1L1Q5H9M0 696 aa8.04□□□□□ -1.12
NUP43-201ENST00000340413 RGMBQ6NW40 437 aa8.04□□□□□ -1.12
NUP43-201ENST00000340413 SYT2Q8N9I0 419 aaPredicted RBP8.04□□□□□ -1.12
NUP43-201ENST00000340413 PIBF1Q8WXW3 757 aa8.04□□□□□ -1.12
NUP43-201ENST00000340413 IQCDQ96DY2 449 aa8.04□□□□□ -1.12
NUP43-201ENST00000340413 CHAMP1Q96JM3 812 aa8.04□□□□□ -1.12
NUP43-201ENST00000340413 NACC1Q96RE7 527 aa8.04□□□□□ -1.12
NUP43-201ENST00000340413 HSD17B14Q9BPX1 270 aa8.04□□□□□ -1.12
NUP43-201ENST00000340413 BMP2KQ9NSY1 1161 aaPredicted RBP8.04□□□□□ -1.12
NUP43-201ENST00000340413 DAAM1Q9Y4D1 1078 aa8.04□□□□□ -1.12
NUP43-201ENST00000340413 NFIBO00712 420 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 PPFIA3O75145 1194 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 CELF2O95319 508 aaKnown RBP8.03□□□□□ -1.12
NUP43-201ENST00000340413 ALDH5A1P51649 535 aaPredicted RBP8.03□□□□□ -1.12
NUP43-201ENST00000340413 RTP1P59025 263 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 STIM1Q13586 685 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 ZYXQ15942 572 aaKnown RBP8.03□□□□□ -1.12
NUP43-201ENST00000340413 FOXD4L6Q3SYB3 417 aaPredicted RBP8.03□□□□□ -1.12
NUP43-201ENST00000340413 FOXD4L3Q6VB84 417 aaPredicted RBP8.03□□□□□ -1.12
NUP43-201ENST00000340413 PPP4R3CPQ6ZMV5 832 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 C4orf19Q8IY42 314 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 RMDN3Q96TC7 470 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 ZNF577Q9BSK1 485 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 MOV10L1Q9BXT6 1211 aaKnown RBP8.03□□□□□ -1.12
NUP43-201ENST00000340413 RBPJLQ9UBG7 517 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 MAN1B1Q9UKM7 699 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 P4HBP07237 508 aaKnown RBP8.03□□□□□ -1.12
NUP43-201ENST00000340413 GUCY2CP25092 1073 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 SPAG1Q07617 926 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 MYBPC2Q14324 1141 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 LRCH2Q5VUJ6 765 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 AFAP1L1Q8TED9 768 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 SNX29Q8TEQ0 813 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 EPSTI1Q96J88 318 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 ST6GALNAC4Q9H4F1 302 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 C17orf75Q9HAS0 396 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 BTBD7Q9P203 1132 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 RWDD2AQ9UIY3 292 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 CCL15-CCL14A0A0B4J2E2 113 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 BICDL2A1A5D9 508 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 WDR64B1ANS9 1081 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 DHX15O43143 795 aaKnown RBP8.03□□□□□ -1.12
NUP43-201ENST00000340413 MARCH6O60337 910 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 FGFR1OPO95684 399 aaKnown RBP8.03□□□□□ -1.12
NUP43-201ENST00000340413 NR3C2P08235 984 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 PLCG1P19174 1290 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 SLC26A2P50443 739 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 NEDD9Q14511 834 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 CCL15Q16663 113 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 BMT2Q1RMZ1 405 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 ZC3H3Q8IXZ2 948 aaKnown RBP8.03□□□□□ -1.12
NUP43-201ENST00000340413 CLMNQ96JQ2 1002 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 BLOC1S4Q9NUP1 217 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 COL20A1Q9P218 1284 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 ZNFX1Q9P2E3 1918 aaKnown RBP8.03□□□□□ -1.12
NUP43-201ENST00000340413 A0A087X0B3 334 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 IGKV6D-21A0A0A0MT36 114 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 CBFA2T2O43439 604 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 GAS2O43903 313 aaKnown RBP8.03□□□□□ -1.12
NUP43-201ENST00000340413 GAS7O60861 476 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 RPN1P04843 607 aaKnown RBP8.03□□□□□ -1.12
NUP43-201ENST00000340413 TECP42680 631 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 TXKP42681 527 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 NKX3-2P78367 333 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 GRIN1Q05586 938 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 MTMR1Q13613 665 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 BAATQ14032 418 aaPredicted RBP8.03□□□□□ -1.12
NUP43-201ENST00000340413 PRR16Q569H4 304 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 OLFML2BQ68BL8 750 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 SLC30A10Q6XR72 485 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 ZNF710Q8N1W2 664 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 MRFAP1L1Q96HT8 127 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 TRIM9Q9C026 710 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.03□□□□□ -1.12
NUP43-201ENST00000340413 Q9Y3F1 56 aa8.03□□□□□ -1.12
NUP43-201ENST00000340413 IPO5O00410 1097 aaKnown RBP8.02□□□□□ -1.13
NUP43-201ENST00000340413 EIF3DO15371 548 aaKnown RBP eCLIP8.02□□□□□ -1.13
NUP43-201ENST00000340413 KLRC4O43908 158 aa8.02□□□□□ -1.13
NUP43-201ENST00000340413 IGHA2P01877 340 aa8.02□□□□□ -1.13
NUP43-201ENST00000340413 FCER1AP12319 257 aa8.02□□□□□ -1.13
NUP43-201ENST00000340413 CAPN2P17655 700 aa8.02□□□□□ -1.13
NUP43-201ENST00000340413 MRPS9P82933 396 aaKnown RBP8.02□□□□□ -1.13
NUP43-201ENST00000340413 GRB14Q14449 540 aa8.02□□□□□ -1.13
NUP43-201ENST00000340413 ZNF792Q3KQV3 632 aa8.02□□□□□ -1.13
NUP43-201ENST00000340413 BRI3BPQ8WY22 251 aa8.02□□□□□ -1.13
NUP43-201ENST00000340413 DHX58Q96C10 678 aa8.02□□□□□ -1.13
NUP43-201ENST00000340413 MMP19Q99542 508 aa8.02□□□□□ -1.13
NUP43-201ENST00000340413 RBSNQ9H1K0 784 aa8.02□□□□□ -1.13
NUP43-201ENST00000340413 ZSWIM4Q9H7M6 989 aa8.02□□□□□ -1.13
NUP43-201ENST00000340413 DNM3Q9UQ16 869 aa8.02□□□□□ -1.13
NUP43-201ENST00000340413 PCDHA5Q9Y5H7 936 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms