RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 RNPC3Q96LT9 517 aaKnown RBP16.71■□□□□ 0.27
ERCC1-203ENST00000340192 GPR20Q99678 358 aa16.71■□□□□ 0.27
ERCC1-203ENST00000340192 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.71■□□□□ 0.273e-7■■□□□ 11.7
ERCC1-203ENST00000340192 ZMYND12Q9H0C1 365 aa16.71■□□□□ 0.27
ERCC1-203ENST00000340192 JADE2Q9NQC1 790 aa16.71■□□□□ 0.27
ERCC1-203ENST00000340192 HDAC6Q9UBN7 1215 aa16.71■□□□□ 0.27
ERCC1-203ENST00000340192 NOD1Q9Y239 953 aa16.71■□□□□ 0.27
ERCC1-203ENST00000340192 TELO2Q9Y4R8 837 aa16.71■□□□□ 0.27
ERCC1-203ENST00000340192 TRIP12Q14669 1992 aaPredicted RBP16.71■□□□□ 0.27
ERCC1-203ENST00000340192 CPLX1O14810 134 aa16.7■□□□□ 0.26
ERCC1-203ENST00000340192 ADAMTS3O15072 1205 aa16.7■□□□□ 0.26
ERCC1-203ENST00000340192 ATP9AO75110 1047 aa16.7■□□□□ 0.26
ERCC1-203ENST00000340192 KCNA2P16389 499 aa16.7■□□□□ 0.26
ERCC1-203ENST00000340192 SREBF1P36956 1147 aa16.7■□□□□ 0.26
ERCC1-203ENST00000340192 SP4Q02446 784 aa16.7■□□□□ 0.26
ERCC1-203ENST00000340192 SSRP1Q08945 709 aaKnown RBP16.7■□□□□ 0.26
ERCC1-203ENST00000340192 TMEM240Q5SV17 173 aa16.7■□□□□ 0.26
ERCC1-203ENST00000340192 JAKMIP3Q5VZ66 844 aa16.7■□□□□ 0.26
ERCC1-203ENST00000340192 GPR153Q6NV75 609 aa16.7■□□□□ 0.26
ERCC1-203ENST00000340192 TRIM22Q8IYM9 498 aa16.7■□□□□ 0.26
ERCC1-203ENST00000340192 SCLYQ96I15 445 aa16.7■□□□□ 0.26
ERCC1-203ENST00000340192 CTAGE1Q96RT6 745 aa16.7■□□□□ 0.26
ERCC1-203ENST00000340192 MXRA8Q9BRK3 442 aa16.7■□□□□ 0.26
ERCC1-203ENST00000340192 C6orf50Q9HD87 102 aa16.7■□□□□ 0.26
ERCC1-203ENST00000340192 IL23AQ9NPF7 189 aa16.7■□□□□ 0.26
ERCC1-203ENST00000340192 PKD2L1Q9P0L9 805 aa16.7■□□□□ 0.26
ERCC1-203ENST00000340192 GTF2IRD1Q9UHL9 959 aa16.7■□□□□ 0.26
ERCC1-203ENST00000340192 H3BRB1 525 aa16.69■□□□□ 0.26
ERCC1-203ENST00000340192 MAFGO15525 162 aa16.69■□□□□ 0.26
ERCC1-203ENST00000340192 LGALS2P05162 132 aa16.69■□□□□ 0.26
ERCC1-203ENST00000340192 REXO1Q8N1G1 1221 aaKnown RBP16.69■□□□□ 0.26
ERCC1-203ENST00000340192 CYP2W1Q8TAV3 490 aa16.69■□□□□ 0.26
ERCC1-203ENST00000340192 IL17RAQ96F46 866 aa16.69■□□□□ 0.26
ERCC1-203ENST00000340192 TUT1Q9H6E5 874 aaKnown RBP16.69■□□□□ 0.26
ERCC1-203ENST00000340192 VPS54Q9P1Q0 977 aa16.69■□□□□ 0.26
ERCC1-203ENST00000340192 TPCN1Q9ULQ1 816 aa16.69■□□□□ 0.26
ERCC1-203ENST00000340192 PITPNM1O00562 1244 aa16.68■□□□□ 0.26
ERCC1-203ENST00000340192 GNA11P29992 359 aa16.68■□□□□ 0.26
ERCC1-203ENST00000340192 ARHGAP4P98171 946 aa16.68■□□□□ 0.26
ERCC1-203ENST00000340192 CEP55Q53EZ4 464 aa16.68■□□□□ 0.26
ERCC1-203ENST00000340192 PSRC1Q6PGN9 363 aaPredicted RBP16.68■□□□□ 0.26
ERCC1-203ENST00000340192 ZNF365Q70YC5 407 aa16.68■□□□□ 0.26
ERCC1-203ENST00000340192 CCDC148Q8NFR7 591 aa16.68■□□□□ 0.26
ERCC1-203ENST00000340192 KCNH7Q9NS40 1196 aa16.68■□□□□ 0.26
ERCC1-203ENST00000340192 AK2P54819 239 aa16.67■□□□□ 0.26
ERCC1-203ENST00000340192 ZNF200P98182 395 aaPredicted RBP16.67■□□□□ 0.26
ERCC1-203ENST00000340192 SCRN1Q12765 414 aa16.67■□□□□ 0.26
ERCC1-203ENST00000340192 BFSP2Q13515 415 aa16.67■□□□□ 0.26
ERCC1-203ENST00000340192 HIC1Q14526 733 aa16.67■□□□□ 0.26
ERCC1-203ENST00000340192 ANKRD1Q15327 319 aa16.67■□□□□ 0.26
ERCC1-203ENST00000340192 UTP14CQ5TAP6 766 aaKnown RBP16.67■□□□□ 0.26
ERCC1-203ENST00000340192 MCTP2Q6DN12 878 aa16.67■□□□□ 0.26
ERCC1-203ENST00000340192 CPLX2Q6PUV4 134 aaKnown RBP16.67■□□□□ 0.26
ERCC1-203ENST00000340192 Q7L0L9 218 aa16.67■□□□□ 0.26
ERCC1-203ENST00000340192 TRIM50Q86XT4 487 aa16.67■□□□□ 0.26
ERCC1-203ENST00000340192 DEFB123Q8N688 67 aa16.67■□□□□ 0.26
ERCC1-203ENST00000340192 CCDC155Q8N6L0 562 aa16.67■□□□□ 0.26
ERCC1-203ENST00000340192 RETREG2Q8NC44 543 aa16.67■□□□□ 0.26
ERCC1-203ENST00000340192 BICD2Q8TD16 824 aa16.67■□□□□ 0.26
ERCC1-203ENST00000340192 SLKQ9H2G2 1235 aaPredicted RBP16.67■□□□□ 0.26
ERCC1-203ENST00000340192 SH3GLB2Q9NR46 395 aa16.67■□□□□ 0.26
ERCC1-203ENST00000340192 MEIS1O00470 390 aa16.66■□□□□ 0.26
ERCC1-203ENST00000340192 PFKFB2O60825 505 aa16.66■□□□□ 0.26
ERCC1-203ENST00000340192 DEXIO95424 95 aa16.66■□□□□ 0.26
ERCC1-203ENST00000340192 FGBP02675 491 aa16.66■□□□□ 0.26
ERCC1-203ENST00000340192 IQCF3P0C7M6 154 aa16.66■□□□□ 0.26
ERCC1-203ENST00000340192 ARP10275 920 aa16.66■□□□□ 0.26
ERCC1-203ENST00000340192 TCF7P36402 384 aaPredicted RBP16.66■□□□□ 0.26
ERCC1-203ENST00000340192 ZNF76P36508 570 aa16.66■□□□□ 0.26
ERCC1-203ENST00000340192 SMAD3P84022 425 aaKnown RBP16.66■□□□□ 0.26
ERCC1-203ENST00000340192 RASIP1Q5U651 963 aa16.66■□□□□ 0.26
ERCC1-203ENST00000340192 RPUSD2Q8IZ73 545 aaKnown RBP16.66■□□□□ 0.26
ERCC1-203ENST00000340192 CAGE1Q8TC20 777 aa16.66■□□□□ 0.26
ERCC1-203ENST00000340192 RASGRP4Q8TDF6 673 aa16.66■□□□□ 0.26
ERCC1-203ENST00000340192 CRYGNQ8WXF5 182 aa16.66■□□□□ 0.26
ERCC1-203ENST00000340192 DHX38Q92620 1227 aaKnown RBP16.66■□□□□ 0.26
ERCC1-203ENST00000340192 VWCEQ96DN2 955 aa16.66■□□□□ 0.26
ERCC1-203ENST00000340192 ZNF215Q9UL58 517 aaPredicted RBP16.66■□□□□ 0.26
ERCC1-203ENST00000340192 COL6A3P12111 3177 aa16.66■□□□□ 0.26
ERCC1-203ENST00000340192 CDH23Q9H251 3354 aa16.66■□□□□ 0.26
ERCC1-203ENST00000340192 GSTTP1A0A1W2PQM5 241 aa16.65■□□□□ 0.26
ERCC1-203ENST00000340192 FAM86B1E9PN63 330 aa16.65■□□□□ 0.26
ERCC1-203ENST00000340192 CYP3A4P08684 503 aa16.65■□□□□ 0.26
ERCC1-203ENST00000340192 FAM86B2P0C5J1 330 aa16.65■□□□□ 0.26
ERCC1-203ENST00000340192 SMIM10L2AP0DMW4 78 aa16.65■□□□□ 0.26
ERCC1-203ENST00000340192 SMIM10L2BP0DMW5 78 aa16.65■□□□□ 0.26
ERCC1-203ENST00000340192 NEK4P51957 841 aa16.65■□□□□ 0.26
ERCC1-203ENST00000340192 NLRP5P59047 1200 aa16.65■□□□□ 0.26
ERCC1-203ENST00000340192 PTK7Q13308 1070 aa16.65■□□□□ 0.26
ERCC1-203ENST00000340192 C8orf34Q49A92 452 aa16.65■□□□□ 0.26
ERCC1-203ENST00000340192 NIPA1Q7RTP0 329 aa16.65■□□□□ 0.26
ERCC1-203ENST00000340192 OTOP2Q7RTS6 562 aa16.65■□□□□ 0.26
ERCC1-203ENST00000340192 DEFB128Q7Z7B8 93 aa16.65■□□□□ 0.26
ERCC1-203ENST00000340192 AFAP1L1Q8TED9 768 aa16.65■□□□□ 0.26
ERCC1-203ENST00000340192 SEPT1Q8WYJ6 367 aa16.65■□□□□ 0.26
ERCC1-203ENST00000340192 HERVK_113Q902F9 699 aa16.65■□□□□ 0.26
ERCC1-203ENST00000340192 AIFM3Q96NN9 605 aa16.65■□□□□ 0.26
ERCC1-203ENST00000340192 AGO4Q9HCK5 861 aaKnown RBP16.65■□□□□ 0.26
ERCC1-203ENST00000340192 JPH1Q9HDC5 661 aaPredicted RBP16.65■□□□□ 0.26
ERCC1-203ENST00000340192 KAT6AQ92794 2004 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms