RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 SEPT2Q15019 361 aa13.53□□□□□ -0.24
OTOF-203ENST00000339598 TMTC3Q6ZXV5 915 aa13.53□□□□□ -0.24
OTOF-203ENST00000339598 NEK9Q8TD19 979 aa13.53□□□□□ -0.24
OTOF-203ENST00000339598 AP1M1Q9BXS5 423 aa13.53□□□□□ -0.24
OTOF-203ENST00000339598 SPC25Q9HBM1 224 aa13.53□□□□□ -0.24
OTOF-203ENST00000339598 TBK1Q9UHD2 729 aa13.53□□□□□ -0.24
OTOF-203ENST00000339598 KDM5CP41229 1560 aa13.53□□□□□ -0.24
OTOF-203ENST00000339598 TFAMQ00059 246 aaKnown RBP13.53□□□□□ -0.24
OTOF-203ENST00000339598 ITKQ08881 620 aa13.53□□□□□ -0.24
OTOF-203ENST00000339598 CUL4BQ13620 913 aa13.53□□□□□ -0.24
OTOF-203ENST00000339598 FAM182BQ5T319 152 aa13.53□□□□□ -0.24
OTOF-203ENST00000339598 GADL1Q6ZQY3 521 aa13.53□□□□□ -0.24
OTOF-203ENST00000339598 RFX6Q8HWS3 928 aa13.53□□□□□ -0.24
OTOF-203ENST00000339598 TBC1D10CQ8IV04 446 aa13.53□□□□□ -0.24
OTOF-203ENST00000339598 FMR1NBQ8N0W7 255 aaPredicted RBP13.53□□□□□ -0.24
OTOF-203ENST00000339598 SLC17A8Q8NDX2 589 aa13.53□□□□□ -0.24
OTOF-203ENST00000339598 FMO2Q99518 471 aa13.53□□□□□ -0.24
OTOF-203ENST00000339598 VCX3AQ9NNX9 186 aa13.53□□□□□ -0.24
OTOF-203ENST00000339598 CLASP1Q7Z460 1538 aa13.53□□□□□ -0.24
OTOF-203ENST00000339598 PPEF1O14829 653 aaPredicted RBP13.53□□□□□ -0.24
OTOF-203ENST00000339598 CDK8P49336 464 aa13.53□□□□□ -0.24
OTOF-203ENST00000339598 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.53□□□□□ -0.24
OTOF-203ENST00000339598 SPZ1Q9BXG8 430 aa13.53□□□□□ -0.24
OTOF-203ENST00000339598 NXF1Q9UBU9 619 aaKnown RBP13.53□□□□□ -0.24
OTOF-203ENST00000339598 ABCA5Q8WWZ7 1642 aa13.53□□□□□ -0.24
OTOF-203ENST00000339598 UGGT1Q9NYU2 1555 aa13.52□□□□□ -0.24
OTOF-203ENST00000339598 A0A087WUV0 522 aaPredicted RBP13.52□□□□□ -0.24
OTOF-203ENST00000339598 NR1D1P20393 614 aa13.52□□□□□ -0.24
OTOF-203ENST00000339598 FAM160B1Q5W0V3 765 aa13.52□□□□□ -0.24
OTOF-203ENST00000339598 WHAMMQ8TF30 809 aa13.52□□□□□ -0.24
OTOF-203ENST00000339598 MRPL47Q9HD33 250 aaKnown RBP13.52□□□□□ -0.24
OTOF-203ENST00000339598 PI4KBQ9UBF8 816 aa13.52□□□□□ -0.24
OTOF-203ENST00000339598 NFU1Q9UMS0 254 aa13.52□□□□□ -0.24
OTOF-203ENST00000339598 ZDHHC9Q9Y397 364 aa13.52□□□□□ -0.24
OTOF-203ENST00000339598 RASGRF2O14827 1237 aa13.52□□□□□ -0.24
OTOF-203ENST00000339598 CYP2E1P05181 493 aaPredicted RBP13.52□□□□□ -0.24
OTOF-203ENST00000339598 RCN2Q14257 317 aa13.52□□□□□ -0.24
OTOF-203ENST00000339598 RASIP1Q5U651 963 aa13.52□□□□□ -0.24
OTOF-203ENST00000339598 ARHGEF18Q6ZSZ5 1173 aa13.52□□□□□ -0.24
OTOF-203ENST00000339598 EFCAB13Q8IY85 973 aa13.52□□□□□ -0.24
OTOF-203ENST00000339598 APOL6Q9BWW8 343 aa13.52□□□□□ -0.24
OTOF-203ENST00000339598 CALN1Q9BXU9 219 aa13.52□□□□□ -0.24
OTOF-203ENST00000339598 DHX36Q9H2U1 1008 aaKnown RBP13.52□□□□□ -0.24
OTOF-203ENST00000339598 NEO1Q92859 1461 aa13.52□□□□□ -0.24
OTOF-203ENST00000339598 SYNMO15061 1565 aa13.52□□□□□ -0.25
OTOF-203ENST00000339598 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.52□□□□□ -0.25
OTOF-203ENST00000339598 ASPHQ12797 758 aa13.52□□□□□ -0.25
OTOF-203ENST00000339598 CCDC93Q567U6 631 aa13.52□□□□□ -0.25
OTOF-203ENST00000339598 C10orf76Q5T2E6 689 aa13.52□□□□□ -0.25
OTOF-203ENST00000339598 EMBQ6PCB8 327 aa13.52□□□□□ -0.25
OTOF-203ENST00000339598 CCDC68Q9H2F9 335 aa13.52□□□□□ -0.25
OTOF-203ENST00000339598 NUB1Q9Y5A7 615 aa13.52□□□□□ -0.25
OTOF-203ENST00000339598 CYP27B1O15528 508 aa13.52□□□□□ -0.25
OTOF-203ENST00000339598 RPSAP08865 295 aaKnown RBP13.52□□□□□ -0.25
OTOF-203ENST00000339598 STAT2P52630 851 aa13.52□□□□□ -0.25
OTOF-203ENST00000339598 DYNLT1P63172 113 aa13.52□□□□□ -0.25
OTOF-203ENST00000339598 ALS2CLQ60I27 953 aa13.52□□□□□ -0.25
OTOF-203ENST00000339598 GCC2Q8IWJ2 1684 aa13.52□□□□□ -0.25
OTOF-203ENST00000339598 CPSF1Q10570 1443 aaKnown RBP13.52□□□□□ -0.25
OTOF-203ENST00000339598 PLEKHG1Q9ULL1 1385 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 LRRD1A4D1F6 860 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 DDIT3P35638 169 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 TRIP13Q15645 432 aaPredicted RBP13.51□□□□□ -0.25
OTOF-203ENST00000339598 HLFQ16534 295 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 EAPPQ56P03 285 aaPredicted RBP13.51□□□□□ -0.25
OTOF-203ENST00000339598 DNAJC24Q6P3W2 148 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 DCLK2Q8N568 766 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 CPVLQ9H3G5 476 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 SLC5A4Q9NY91 659 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 EVI5O60447 810 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 HOXA13P31271 388 aaPredicted RBP13.51□□□□□ -0.25
OTOF-203ENST00000339598 SERPINB6P35237 376 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 PEX19P40855 299 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 GYS2P54840 703 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 KCTD2Q14681 263 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 SLMAPQ14BN4 828 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 TMED2Q15363 201 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 CCDC144BQ3MJ40 725 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 BRIP1Q9BX63 1249 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 SMYD2Q9NRG4 433 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 TRIM49BA6NDI0 452 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 BASP1P80723 227 aaKnown RBP13.51□□□□□ -0.25
OTOF-203ENST00000339598 NAA30Q147X3 362 aaPredicted RBP13.51□□□□□ -0.25
OTOF-203ENST00000339598 SYDE2Q5VT97 1194 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 TOGARAM2Q6ZUX3 1019 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 GOLPH3LQ9H4A5 285 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 ADAM21Q9UKJ8 722 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 PNMA6FA0A0J9YX94 578 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 SPDYE16A6NNV3 312 aaPredicted RBP13.51□□□□□ -0.25
OTOF-203ENST00000339598 SFI1A8K8P3 1242 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 PRDX5P30044 214 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 TFDP1Q14186 410 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 CDC37Q16543 378 aaPredicted RBP13.51□□□□□ -0.25
OTOF-203ENST00000339598 SPDYE2Q495Y8 402 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 HIBCHQ6NVY1 386 aaPredicted RBP13.51□□□□□ -0.25
OTOF-203ENST00000339598 TMC4Q7Z404 712 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 SULF1Q8IWU6 871 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 ZNF579Q8NAF0 562 aaKnown RBP13.51□□□□□ -0.25
OTOF-203ENST00000339598 PDLIM2Q96JY6 352 aa13.51□□□□□ -0.25
OTOF-203ENST00000339598 CDK12Q9NYV4 1490 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms