RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 MAP3K10Q02779 954 aa18.11■□□□□ 0.49
LITAF-201ENST00000339430 TUBB2AQ13885 445 aa18.11■□□□□ 0.49
LITAF-201ENST00000339430 CTAGE6Q86UF2 777 aa18.11■□□□□ 0.49
LITAF-201ENST00000339430 CTAGE4Q8IX94 777 aa18.11■□□□□ 0.49
LITAF-201ENST00000339430 NOA1Q8NC60 698 aaKnown RBP18.11■□□□□ 0.49
LITAF-201ENST00000339430 HAS1Q92839 578 aa18.11■□□□□ 0.49
LITAF-201ENST00000339430 JAKMIP2Q96AA8 810 aa18.11■□□□□ 0.49
LITAF-201ENST00000339430 TUBB2BQ9BVA1 445 aa18.11■□□□□ 0.49
LITAF-201ENST00000339430 FUT8Q9BYC5 575 aa18.11■□□□□ 0.49
LITAF-201ENST00000339430 LACRTQ9GZZ8 138 aa18.11■□□□□ 0.49
LITAF-201ENST00000339430 CCDC151A5D8V7 595 aa18.11■□□□□ 0.49
LITAF-201ENST00000339430 ATP1A1P05023 1023 aaKnown RBP18.11■□□□□ 0.49
LITAF-201ENST00000339430 SSBP05455 408 aaKnown RBP eCLIP18.11■□□□□ 0.49
LITAF-201ENST00000339430 PLEKP08567 350 aaPredicted RBP18.11■□□□□ 0.49
LITAF-201ENST00000339430 CYLC1P35663 651 aaPredicted RBP18.11■□□□□ 0.49
LITAF-201ENST00000339430 CLK2P49760 499 aaKnown RBP18.11■□□□□ 0.49
LITAF-201ENST00000339430 PDIA5Q14554 519 aa18.11■□□□□ 0.49
LITAF-201ENST00000339430 WHAMMP3Q1A5X7 153 aa18.11■□□□□ 0.49
LITAF-201ENST00000339430 PSTPIP2Q9H939 334 aa18.11■□□□□ 0.49
LITAF-201ENST00000339430 ZCCHC17Q9NP64 241 aaKnown RBP18.11■□□□□ 0.49
LITAF-201ENST00000339430 FAM207AQ9NSI2 230 aaPredicted RBP18.11■□□□□ 0.49
LITAF-201ENST00000339430 DUSP10Q9Y6W6 482 aa18.11■□□□□ 0.49
LITAF-201ENST00000339430 USP17L15C9J2P7 530 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 USP17L13C9JLJ4 530 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 USP17L11C9JVI0 530 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 USP17L18D6R9N7 530 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 USP17L22D6RA61 530 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 USP17L17D6RBQ6 530 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 USP17L19D6RCP7 530 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 USP17L20D6RJB6 530 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 ZBTB5O15062 677 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 EPHB6O15197 1021 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 ATP8B1O43520 1251 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 SRGAP2O75044 1071 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 KRT83P78385 493 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 USP17L24Q0WX57 530 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 VWA3BQ502W6 1294 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 USP17L6PQ6QN14 398 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 MKL1Q969V6 931 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 ERGIC2Q96RQ1 377 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.1■□□□□ 0.49
LITAF-201ENST00000339430 ZBTB21Q9ULJ3 1066 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 PVALEFA0A1B0GWK0 134 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 KIF20AO95235 890 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 CAP2P40123 477 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 BRD3Q15059 726 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 COBLL1Q53SF7 1204 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 PPP4R3AQ6IN85 833 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 RETREG2Q8NC44 543 aa18.1■□□□□ 0.49
LITAF-201ENST00000339430 RNF216Q9NWF9 866 aaPredicted RBP18.1■□□□□ 0.49
LITAF-201ENST00000339430 OAS2P29728 719 aaKnown RBP18.09■□□□□ 0.49
LITAF-201ENST00000339430 MRPL12P52815 198 aaKnown RBP18.09■□□□□ 0.49
LITAF-201ENST00000339430 SMC1AQ14683 1233 aaKnown RBP18.09■□□□□ 0.49
LITAF-201ENST00000339430 TMEM119Q4V9L6 283 aa18.09■□□□□ 0.49
LITAF-201ENST00000339430 GPATCH4Q5T3I0 446 aaKnown RBP18.09■□□□□ 0.49
LITAF-201ENST00000339430 PPP1R18Q6NYC8 613 aa18.09■□□□□ 0.49
LITAF-201ENST00000339430 KRT26Q7Z3Y9 468 aa18.09■□□□□ 0.49
LITAF-201ENST00000339430 NDST4Q9H3R1 872 aa18.09■□□□□ 0.49
LITAF-201ENST00000339430 MMRN2Q9H8L6 949 aa18.09■□□□□ 0.49
LITAF-201ENST00000339430 TBC1D7Q9P0N9 293 aa18.09■□□□□ 0.49
LITAF-201ENST00000339430 PHF20L1A8MW92 1017 aa18.09■□□□□ 0.49
LITAF-201ENST00000339430 IPO7O95373 1038 aaKnown RBP18.09■□□□□ 0.49
LITAF-201ENST00000339430 GUF1Q8N442 669 aaKnown RBP18.09■□□□□ 0.49
LITAF-201ENST00000339430 MSANTD4Q8NCY6 345 aa18.09■□□□□ 0.49
LITAF-201ENST00000339430 CAPZA3Q96KX2 299 aa18.09■□□□□ 0.49
LITAF-201ENST00000339430 SUGCTQ9HAC7 445 aa18.09■□□□□ 0.49
LITAF-201ENST00000339430 PCDHA12Q9UN75 941 aa18.09■□□□□ 0.49
LITAF-201ENST00000339430 MACROD2A1Z1Q3 448 aa18.08■□□□□ 0.48
LITAF-201ENST00000339430 KRT86O43790 486 aa18.08■□□□□ 0.48
LITAF-201ENST00000339430 TRAPPC11Q7Z392 1133 aa18.08■□□□□ 0.48
LITAF-201ENST00000339430 L3MBTL3Q96JM7 780 aaPredicted RBP18.08■□□□□ 0.48
LITAF-201ENST00000339430 A0A1W2PRG0 241 aa18.08■□□□□ 0.48
LITAF-201ENST00000339430 ERICH4A6NGS2 130 aa18.08■□□□□ 0.48
LITAF-201ENST00000339430 GLTPD2A6NH11 291 aa18.08■□□□□ 0.48
LITAF-201ENST00000339430 EIF3CLB5ME19 914 aaKnown RBP18.08■□□□□ 0.48
LITAF-201ENST00000339430 SNAP25P60880 206 aa18.08■□□□□ 0.48
LITAF-201ENST00000339430 VSNL1P62760 191 aa18.08■□□□□ 0.48
LITAF-201ENST00000339430 CACNB1Q02641 598 aaPredicted RBP18.08■□□□□ 0.48
LITAF-201ENST00000339430 QRICH1Q2TAL8 776 aa18.08■□□□□ 0.48
LITAF-201ENST00000339430 CCDC155Q8N6L0 562 aa18.08■□□□□ 0.48
LITAF-201ENST00000339430 EIF3CQ99613 913 aaKnown RBP18.08■□□□□ 0.48
LITAF-201ENST00000339430 ABCB6Q9NP58 842 aa18.08■□□□□ 0.48
LITAF-201ENST00000339430 SIK3Q9Y2K2 1263 aa18.08■□□□□ 0.48
LITAF-201ENST00000339430 E9PMD0 336 aa18.07■□□□□ 0.48
LITAF-201ENST00000339430 ZNF263O14978 683 aa18.07■□□□□ 0.48
LITAF-201ENST00000339430 POLR2AP24928 1970 aaKnown RBP18.07■□□□□ 0.48
LITAF-201ENST00000339430 ECE1P42892 770 aa18.07■□□□□ 0.48
LITAF-201ENST00000339430 RAD51AP2Q09MP3 1159 aa18.07■□□□□ 0.48
LITAF-201ENST00000339430 MAN2A1Q16706 1144 aa18.07■□□□□ 0.48
LITAF-201ENST00000339430 SLFN13Q68D06 897 aa18.07■□□□□ 0.48
LITAF-201ENST00000339430 CCDC170Q8IYT3 715 aa18.07■□□□□ 0.48
LITAF-201ENST00000339430 CCDC42Q96M95 316 aa18.07■□□□□ 0.48
LITAF-201ENST00000339430 RAB21Q9UL25 225 aa18.07■□□□□ 0.48
LITAF-201ENST00000339430 ZC3H4Q9UPT8 1303 aaKnown RBP18.06■□□□□ 0.48
LITAF-201ENST00000339430 NPHP3-ACAD11A0A0J9YXS1 232 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 F5H6K3 240 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 KLRC3Q07444 240 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 COASYQ13057 564 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 BEND6Q5SZJ8 279 aaPredicted RBP18.06■□□□□ 0.48
LITAF-201ENST00000339430 ACER1Q8TDN7 264 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms