RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 SLC4A9Q96Q91 983 aa22.37■■□□□ 1.17
RUNX3-202ENST00000338888 BAIAP2L1Q9UHR4 511 aa22.37■■□□□ 1.17
RUNX3-202ENST00000338888 PAPPAQ13219 1627 aa22.37■■□□□ 1.17
RUNX3-202ENST00000338888 MSL1Q68DK7 614 aa22.36■■□□□ 1.17
RUNX3-202ENST00000338888 TAF4BQ92750 862 aa22.36■■□□□ 1.17
RUNX3-202ENST00000338888 AP1M1Q9BXS5 423 aa22.36■■□□□ 1.17
RUNX3-202ENST00000338888 PCDHGC5Q9Y5F6 944 aa22.36■■□□□ 1.17
RUNX3-202ENST00000338888 SFMBT2Q5VUG0 894 aa22.36■■□□□ 1.17
RUNX3-202ENST00000338888 LRCH2Q5VUJ6 765 aa22.36■■□□□ 1.17
RUNX3-202ENST00000338888 HIBCHQ6NVY1 386 aaPredicted RBP22.36■■□□□ 1.17
RUNX3-202ENST00000338888 MAGEF1Q9HAY2 307 aa22.36■■□□□ 1.17
RUNX3-202ENST00000338888 TMEM59LQ9UK28 342 aa22.36■■□□□ 1.17
RUNX3-202ENST00000338888 M0R2N6 131 aa22.35■■□□□ 1.17
RUNX3-202ENST00000338888 ELF3P78545 371 aaPredicted RBP22.35■■□□□ 1.17
RUNX3-202ENST00000338888 CUL1Q13616 776 aa22.35■■□□□ 1.17
RUNX3-202ENST00000338888 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.35■■□□□ 1.174e-9■■■■■ 77.4
RUNX3-202ENST00000338888 GOLPH3Q9H4A6 298 aa22.35■■□□□ 1.17
RUNX3-202ENST00000338888 ATP6V1G2O95670 118 aa22.35■■□□□ 1.17
RUNX3-202ENST00000338888 AMPD3Q01432 767 aa22.35■■□□□ 1.17
RUNX3-202ENST00000338888 PPP1R7Q15435 360 aa22.35■■□□□ 1.17
RUNX3-202ENST00000338888 DYMQ7RTS9 669 aa22.35■■□□□ 1.17
RUNX3-202ENST00000338888 MDM1Q8TC05 714 aa22.35■■□□□ 1.17
RUNX3-202ENST00000338888 NOD2Q9HC29 1040 aa22.35■■□□□ 1.17
RUNX3-202ENST00000338888 LRRC4CQ9HCJ2 640 aa22.35■■□□□ 1.17
RUNX3-202ENST00000338888 A0A087X0T9 212 aa22.34■■□□□ 1.17
RUNX3-202ENST00000338888 SERPING1P05155 500 aa22.34■■□□□ 1.17
RUNX3-202ENST00000338888 FGRP09769 529 aa22.34■■□□□ 1.17
RUNX3-202ENST00000338888 FAM228BP0C875 321 aa22.34■■□□□ 1.17
RUNX3-202ENST00000338888 TECP42680 631 aa22.34■■□□□ 1.17
RUNX3-202ENST00000338888 CHADLQ6NUI6 762 aa22.34■■□□□ 1.17
RUNX3-202ENST00000338888 LUC7LQ9NQ29 371 aaKnown RBP22.34■■□□□ 1.17
RUNX3-202ENST00000338888 ADAMTS1Q9UHI8 967 aa22.34■■□□□ 1.17
RUNX3-202ENST00000338888 BCL9O00512 1426 aa22.34■■□□□ 1.17
RUNX3-202ENST00000338888 BAZ2AQ9UIF9 1905 aaKnown RBP22.34■■□□□ 1.17
RUNX3-202ENST00000338888 CEP104O60308 925 aa22.34■■□□□ 1.17
RUNX3-202ENST00000338888 DNAJC8O75937 253 aaPredicted RBP22.34■■□□□ 1.17
RUNX3-202ENST00000338888 DRD4P21917 467 aa22.34■■□□□ 1.17
RUNX3-202ENST00000338888 RPS6KA1Q15418 735 aa22.34■■□□□ 1.17
RUNX3-202ENST00000338888 FAM83BQ5T0W9 1011 aa22.34■■□□□ 1.17
RUNX3-202ENST00000338888 DHX37Q8IY37 1157 aaKnown RBP22.34■■□□□ 1.17
RUNX3-202ENST00000338888 TRIM6Q9C030 488 aaPredicted RBP22.34■■□□□ 1.17
RUNX3-202ENST00000338888 KDM4CQ9H3R0 1056 aa22.34■■□□□ 1.17
RUNX3-202ENST00000338888 F8W031 263 aaPredicted RBP22.33■■□□□ 1.17
RUNX3-202ENST00000338888 ORC4O43929 436 aa22.33■■□□□ 1.17
RUNX3-202ENST00000338888 RTN2O75298 545 aa22.33■■□□□ 1.17
RUNX3-202ENST00000338888 SKAP2O75563 359 aaPredicted RBP22.33■■□□□ 1.17
RUNX3-202ENST00000338888 PAEPP09466 180 aa22.33■■□□□ 1.17
RUNX3-202ENST00000338888 POLR2FP61218 127 aaKnown RBP22.33■■□□□ 1.17
RUNX3-202ENST00000338888 KRT71Q3SY84 523 aa22.33■■□□□ 1.17
RUNX3-202ENST00000338888 AGBL2Q5U5Z8 902 aa22.33■■□□□ 1.17
RUNX3-202ENST00000338888 BRIP1Q9BX63 1249 aa22.33■■□□□ 1.17
RUNX3-202ENST00000338888 DDX47Q9H0S4 455 aaKnown RBP22.33■■□□□ 1.17
RUNX3-202ENST00000338888 ITGB4P16144 1822 aa22.33■■□□□ 1.17
RUNX3-202ENST00000338888 PPP1R12AO14974 1030 aaPredicted RBP22.33■■□□□ 1.16
RUNX3-202ENST00000338888 SART1O43290 800 aaKnown RBP22.33■■□□□ 1.16
RUNX3-202ENST00000338888 PPIP5K2O43314 1243 aa22.33■■□□□ 1.16
RUNX3-202ENST00000338888 KIF5BP33176 963 aa22.33■■□□□ 1.16
RUNX3-202ENST00000338888 ARMC9Q7Z3E5 817 aa22.33■■□□□ 1.16
RUNX3-202ENST00000338888 C8orf37Q96NL8 207 aa22.33■■□□□ 1.16
RUNX3-202ENST00000338888 PLCH1Q4KWH8 1693 aa22.33■■□□□ 1.16
RUNX3-202ENST00000338888 NOL4O94818 638 aa22.32■■□□□ 1.16
RUNX3-202ENST00000338888 PRPHP41219 470 aa22.32■■□□□ 1.16
RUNX3-202ENST00000338888 LRRC41Q15345 812 aa22.32■■□□□ 1.16
RUNX3-202ENST00000338888 SLC18A3Q16572 532 aa22.32■■□□□ 1.16
RUNX3-202ENST00000338888 LETM2Q2VYF4 491 aa22.32■■□□□ 1.16
RUNX3-202ENST00000338888 HEATR3Q7Z4Q2 680 aa22.32■■□□□ 1.16
RUNX3-202ENST00000338888 FMNL3Q8IVF7 1028 aa22.32■■□□□ 1.16
RUNX3-202ENST00000338888 SCFD2Q8WU76 684 aa22.32■■□□□ 1.16
RUNX3-202ENST00000338888 EDEM3Q9BZQ6 932 aa22.32■■□□□ 1.16
RUNX3-202ENST00000338888 MTMR7Q9Y216 660 aa22.32■■□□□ 1.16
RUNX3-202ENST00000338888 ATP6V0A2Q9Y487 856 aa22.32■■□□□ 1.16
RUNX3-202ENST00000338888 LAD1O00515 517 aa22.32■■□□□ 1.16
RUNX3-202ENST00000338888 DAPK3O43293 454 aa22.32■■□□□ 1.16
RUNX3-202ENST00000338888 FGFR1OPO95684 399 aaKnown RBP22.32■■□□□ 1.16
RUNX3-202ENST00000338888 OR52Z1P0C646 297 aa22.32■■□□□ 1.16
RUNX3-202ENST00000338888 NAIF1Q69YI7 327 aaPredicted RBP22.32■■□□□ 1.16
RUNX3-202ENST00000338888 EIF1ADQ8N9N8 165 aaKnown RBP22.32■■□□□ 1.16
RUNX3-202ENST00000338888 ANKS1AQ92625 1134 aa22.32■■□□□ 1.16
RUNX3-202ENST00000338888 AK8Q96MA6 479 aa22.32■■□□□ 1.16
RUNX3-202ENST00000338888 SH3GLB2Q9NR46 395 aa22.32■■□□□ 1.16
RUNX3-202ENST00000338888 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.32■■□□□ 1.16
RUNX3-202ENST00000338888 TSPY2A6NKD2 308 aa22.31■■□□□ 1.16
RUNX3-202ENST00000338888 CCNT1O60563 726 aaKnown RBP22.31■■□□□ 1.16
RUNX3-202ENST00000338888 TRIM37O94972 964 aa22.31■■□□□ 1.16
RUNX3-202ENST00000338888 GHRP10912 638 aa22.31■■□□□ 1.16
RUNX3-202ENST00000338888 SLC4A8Q2Y0W8 1093 aa22.31■■□□□ 1.16
RUNX3-202ENST00000338888 NBPF9Q3BBW0 867 aa22.31■■□□□ 1.16
RUNX3-202ENST00000338888 COBLL1Q53SF7 1204 aa22.31■■□□□ 1.16
RUNX3-202ENST00000338888 LRRC55Q6ZSA7 311 aa22.31■■□□□ 1.16
RUNX3-202ENST00000338888 MARCH10Q8NA82 808 aaPredicted RBP22.31■■□□□ 1.16
RUNX3-202ENST00000338888 GLIS3Q8NEA6 775 aa22.31■■□□□ 1.16
RUNX3-202ENST00000338888 STAMBPL1Q96FJ0 436 aa22.31■■□□□ 1.16
RUNX3-202ENST00000338888 CEP72Q9P209 647 aa22.31■■□□□ 1.16
RUNX3-202ENST00000338888 MYMKA6NI61 221 aa22.31■■□□□ 1.16
RUNX3-202ENST00000338888 CCT8L1PA6NM43 557 aa22.31■■□□□ 1.16
RUNX3-202ENST00000338888 RAPGEF1Q13905 1077 aa22.31■■□□□ 1.16
RUNX3-202ENST00000338888 TCP11Q8WWU5 503 aa22.31■■□□□ 1.16
RUNX3-202ENST00000338888 P3H4Q92791 437 aa22.31■■□□□ 1.16
RUNX3-202ENST00000338888 CUL5Q93034 780 aa22.31■■□□□ 1.16
RUNX3-202ENST00000338888 CHMP6Q96FZ7 201 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms