RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 TBX1O43435 398 aa4.43□□□□□ -1.7
XRCC4-202ENST00000338635 DGKIO75912 1065 aa4.43□□□□□ -1.7
XRCC4-202ENST00000338635 COL6A1P12109 1028 aa4.43□□□□□ -1.7
XRCC4-202ENST00000338635 LCP1P13796 627 aa4.43□□□□□ -1.7
XRCC4-202ENST00000338635 TGFB2P61812 414 aa4.43□□□□□ -1.7
XRCC4-202ENST00000338635 FOXE3Q13461 319 aa4.43□□□□□ -1.7
XRCC4-202ENST00000338635 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.43□□□□□ -1.7
XRCC4-202ENST00000338635 GNRHR2Q96P88 292 aa4.43□□□□□ -1.7
XRCC4-202ENST00000338635 CLDND1Q9NY35 253 aa4.43□□□□□ -1.7
XRCC4-202ENST00000338635 MYOTQ9UBF9 498 aa4.43□□□□□ -1.7
XRCC4-202ENST00000338635 SCAMP3O14828 347 aaKnown RBP4.42□□□□□ -1.7
XRCC4-202ENST00000338635 CNOT4O95628 575 aaKnown RBP4.42□□□□□ -1.7
XRCC4-202ENST00000338635 CPP00450 1065 aa4.42□□□□□ -1.7
XRCC4-202ENST00000338635 SCG5P05408 212 aa4.42□□□□□ -1.7
XRCC4-202ENST00000338635 ITGAVP06756 1048 aa4.42□□□□□ -1.7
XRCC4-202ENST00000338635 LTBRP36941 435 aa4.42□□□□□ -1.7
XRCC4-202ENST00000338635 FHL2Q14192 279 aa4.42□□□□□ -1.7
XRCC4-202ENST00000338635 PRKD1Q15139 912 aaPredicted RBP4.42□□□□□ -1.7
XRCC4-202ENST00000338635 SF1Q15637 639 aaKnown RBP4.42□□□□□ -1.7
XRCC4-202ENST00000338635 PRSS53Q2L4Q9 553 aa4.42□□□□□ -1.7
XRCC4-202ENST00000338635 PHF19Q5T6S3 580 aa4.42□□□□□ -1.7
XRCC4-202ENST00000338635 ACBD5Q5T8D3 534 aaPredicted RBP4.42□□□□□ -1.7
XRCC4-202ENST00000338635 ZNF575Q86XF7 245 aa4.42□□□□□ -1.7
XRCC4-202ENST00000338635 CCDC140Q96MF4 163 aa4.42□□□□□ -1.7
XRCC4-202ENST00000338635 SMOC1Q9H4F8 434 aa4.42□□□□□ -1.7
XRCC4-202ENST00000338635 EPB41L1Q9H4G0 881 aa4.42□□□□□ -1.7
XRCC4-202ENST00000338635 SEC61A2Q9H9S3 476 aa4.42□□□□□ -1.7
XRCC4-202ENST00000338635 HSPBP1Q9NZL4 362 aa4.42□□□□□ -1.7
XRCC4-202ENST00000338635 LRP2BPQ9P2M1 347 aa4.42□□□□□ -1.7
XRCC4-202ENST00000338635 FOXS1O43638 330 aa4.41□□□□□ -1.7
XRCC4-202ENST00000338635 KLHL18O94889 574 aa4.41□□□□□ -1.7
XRCC4-202ENST00000338635 KCNJ6P48051 423 aa4.41□□□□□ -1.7
XRCC4-202ENST00000338635 TESK1Q15569 626 aa4.41□□□□□ -1.7
XRCC4-202ENST00000338635 SV2CQ496J9 727 aa4.41□□□□□ -1.7
XRCC4-202ENST00000338635 TCTN3Q6NUS6 607 aa4.41□□□□□ -1.7
XRCC4-202ENST00000338635 Q6ZUG5 572 aa4.41□□□□□ -1.7
XRCC4-202ENST00000338635 RALYLQ86SE5 291 aaKnown RBP4.41□□□□□ -1.7
XRCC4-202ENST00000338635 METTL16Q86W50 562 aaKnown RBP4.41□□□□□ -1.7
XRCC4-202ENST00000338635 PPIL6Q8IXY8 311 aa4.41□□□□□ -1.7
XRCC4-202ENST00000338635 PHOSPHO1Q8TCT1 267 aa4.41□□□□□ -1.7
XRCC4-202ENST00000338635 TNFRSF18Q9Y5U5 241 aa4.41□□□□□ -1.7
XRCC4-202ENST00000338635 MAFKO60675 156 aa4.4□□□□□ -1.7
XRCC4-202ENST00000338635 GJA8P48165 433 aa4.4□□□□□ -1.7
XRCC4-202ENST00000338635 DENND5AQ6IQ26 1287 aa4.4□□□□□ -1.7
XRCC4-202ENST00000338635 PROSER1Q86XN7 944 aa4.4□□□□□ -1.7
XRCC4-202ENST00000338635 TRIM48Q8IWZ4 208 aa4.4□□□□□ -1.7
XRCC4-202ENST00000338635 GIMAP8Q8ND71 665 aaPredicted RBP4.4□□□□□ -1.7
XRCC4-202ENST00000338635 SEC16BQ96JE7 1060 aa4.4□□□□□ -1.7
XRCC4-202ENST00000338635 LMF1Q96S06 567 aa4.4□□□□□ -1.7
XRCC4-202ENST00000338635 ADOQ96SZ5 270 aa4.4□□□□□ -1.7
XRCC4-202ENST00000338635 ASH2LQ9UBL3 628 aa4.4□□□□□ -1.7
XRCC4-202ENST00000338635 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.4□□□□□ -1.7
XRCC4-202ENST00000338635 GRIN1Q05586 938 aa4.4□□□□□ -1.71
XRCC4-202ENST00000338635 SMAD2Q15796 467 aaKnown RBP4.4□□□□□ -1.71
XRCC4-202ENST00000338635 NRN1LQ496H8 165 aa4.4□□□□□ -1.71
XRCC4-202ENST00000338635 MIIPQ5JXC2 388 aa4.4□□□□□ -1.71
XRCC4-202ENST00000338635 VASNQ6EMK4 673 aa4.4□□□□□ -1.71
XRCC4-202ENST00000338635 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
XRCC4-202ENST00000338635 ZNF227Q86WZ6 799 aa4.4□□□□□ -1.71
XRCC4-202ENST00000338635 DTX3Q8N9I9 347 aa4.4□□□□□ -1.71
XRCC4-202ENST00000338635 CLEC4DQ8WXI8 215 aa4.4□□□□□ -1.71
XRCC4-202ENST00000338635 ANAPC16Q96DE5 110 aa4.4□□□□□ -1.71
XRCC4-202ENST00000338635 ZNF503Q96F45 646 aa4.4□□□□□ -1.71
XRCC4-202ENST00000338635 AJUBAQ96IF1 538 aa4.4□□□□□ -1.71
XRCC4-202ENST00000338635 LRRC37BQ96QE4 947 aa4.4□□□□□ -1.71
XRCC4-202ENST00000338635 DLL4Q9NR61 685 aa4.4□□□□□ -1.71
XRCC4-202ENST00000338635 C11orf21Q9P2W6 132 aa4.4□□□□□ -1.71
XRCC4-202ENST00000338635 ZFR2Q9UPR6 939 aaKnown RBP4.4□□□□□ -1.71
XRCC4-202ENST00000338635 SLC4A7Q9Y6M7 1214 aa4.4□□□□□ -1.71
XRCC4-202ENST00000338635 KRIT1O00522 736 aa4.39□□□□□ -1.71
XRCC4-202ENST00000338635 SLC27A2O14975 620 aa4.39□□□□□ -1.71
XRCC4-202ENST00000338635 FBXO21O94952 628 aa4.39□□□□□ -1.71
XRCC4-202ENST00000338635 KNG1P01042 644 aa4.39□□□□□ -1.71
XRCC4-202ENST00000338635 CHGBP05060 677 aa4.39□□□□□ -1.71
XRCC4-202ENST00000338635 CKMP06732 381 aa4.39□□□□□ -1.71
XRCC4-202ENST00000338635 CSF2RBP32927 897 aa4.39□□□□□ -1.71
XRCC4-202ENST00000338635 RNF207Q6ZRF8 634 aa4.39□□□□□ -1.71
XRCC4-202ENST00000338635 TAX1BP1Q86VP1 789 aa4.39□□□□□ -1.71
XRCC4-202ENST00000338635 TMEM145Q8NBT3 493 aa4.39□□□□□ -1.71
XRCC4-202ENST00000338635 JAM3Q9BX67 310 aa4.39□□□□□ -1.71
XRCC4-202ENST00000338635 CDIP1Q9H305 208 aa4.39□□□□□ -1.71
XRCC4-202ENST00000338635 PLSCR1O15162 318 aa4.38□□□□□ -1.71
XRCC4-202ENST00000338635 RECKO95980 971 aa4.38□□□□□ -1.71
XRCC4-202ENST00000338635 GLRBP48167 497 aa4.38□□□□□ -1.71
XRCC4-202ENST00000338635 GFRA1P56159 465 aa4.38□□□□□ -1.71
XRCC4-202ENST00000338635 USP39Q53GS9 565 aaKnown RBP4.38□□□□□ -1.71
XRCC4-202ENST00000338635 IGFL4Q6B9Z1 124 aa4.38□□□□□ -1.71
XRCC4-202ENST00000338635 CYP4F22Q6NT55 531 aa4.38□□□□□ -1.71
XRCC4-202ENST00000338635 C6orf15Q6UXA7 325 aaPredicted RBP4.38□□□□□ -1.71
XRCC4-202ENST00000338635 GPR155Q7Z3F1 870 aa4.38□□□□□ -1.71
XRCC4-202ENST00000338635 TTLL11Q8NHH1 800 aa4.38□□□□□ -1.71
XRCC4-202ENST00000338635 EXTL1Q92935 676 aa4.38□□□□□ -1.71
XRCC4-202ENST00000338635 CSRNP2Q9H175 543 aa4.38□□□□□ -1.71
XRCC4-202ENST00000338635 SLC6A20Q9NP91 592 aa4.38□□□□□ -1.71
XRCC4-202ENST00000338635 STRIP2Q9ULQ0 834 aa4.38□□□□□ -1.71
XRCC4-202ENST00000338635 PCSK5Q92824 1860 aa4.38□□□□□ -1.71
XRCC4-202ENST00000338635 ABHD18Q0P651 414 aa4.37□□□□□ -1.71
XRCC4-202ENST00000338635 AGBL4Q5VU57 503 aa4.37□□□□□ -1.71
XRCC4-202ENST00000338635 NT5DC4Q86YG4 428 aa4.37□□□□□ -1.71
XRCC4-202ENST00000338635 FAM178BQ8IXR5 827 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms