RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 TEKT3Q9BXF9 490 aa17.3■□□□□ 0.36
LIMS1-202ENST00000338045 SPATC1LQ9H0A9 340 aa17.3■□□□□ 0.36
LIMS1-202ENST00000338045 AGO4Q9HCK5 861 aaKnown RBP17.3■□□□□ 0.36
LIMS1-202ENST00000338045 FBXO40Q9UH90 709 aa17.3■□□□□ 0.36
LIMS1-202ENST00000338045 GDAQ9Y2T3 454 aa17.3■□□□□ 0.36
LIMS1-202ENST00000338045 POTEFA5A3E0 1075 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 E9PMD0 336 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 ZNF18P17022 549 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 MUTP22033 750 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 MTMR1Q13613 665 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 DHX8Q14562 1220 aaKnown RBP17.29■□□□□ 0.36
LIMS1-202ENST00000338045 POTEGQ6S5H5 508 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 UNC13DQ70J99 1090 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 GBA2Q9HCG7 927 aaPredicted RBP17.29■□□□□ 0.36
LIMS1-202ENST00000338045 TUFT1Q9NNX1 390 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 FANCLQ9NW38 375 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 NFE2L3Q9Y4A8 694 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 DHX15O43143 795 aaKnown RBP17.29■□□□□ 0.36
LIMS1-202ENST00000338045 NR3C2P08235 984 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 PLA2G4BP0C869 781 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 OSBPP22059 807 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 CCND2P30279 289 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 PRCPP42785 496 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 COBLL1Q53SF7 1204 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 SPATA1Q5VX52 437 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.29■□□□□ 0.36
LIMS1-202ENST00000338045 TRMT44Q8IYL2 757 aaKnown RBP17.29■□□□□ 0.36
LIMS1-202ENST00000338045 ADSSL1Q8N142 457 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 DDX12PQ92771 950 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 UNC45AQ9H3U1 944 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 EXOC1Q9NV70 894 aa17.29■□□□□ 0.36
LIMS1-202ENST00000338045 SYNRGQ9UMZ2 1314 aa17.28■□□□□ 0.36
LIMS1-202ENST00000338045 ATP1A3P13637 1013 aa17.28■□□□□ 0.36
LIMS1-202ENST00000338045 SLC12A3P55017 1021 aa17.28■□□□□ 0.36
LIMS1-202ENST00000338045 EHHADHQ08426 723 aa17.28■□□□□ 0.36
LIMS1-202ENST00000338045 PDE4DQ08499 809 aa17.28■□□□□ 0.36
LIMS1-202ENST00000338045 EPHA7Q15375 998 aa17.28■□□□□ 0.36
LIMS1-202ENST00000338045 DNAJC19Q96DA6 116 aa17.28■□□□□ 0.36
LIMS1-202ENST00000338045 INPP4AQ96PE3 977 aaPredicted RBP17.28■□□□□ 0.36
LIMS1-202ENST00000338045 RWDD2AQ9UIY3 292 aa17.28■□□□□ 0.36
LIMS1-202ENST00000338045 DNM3Q9UQ16 869 aa17.28■□□□□ 0.36
LIMS1-202ENST00000338045 PFASO15067 1338 aa17.27■□□□□ 0.36
LIMS1-202ENST00000338045 LCTP09848 1927 aa17.27■□□□□ 0.36
LIMS1-202ENST00000338045 SOCS7O14512 581 aa17.27■□□□□ 0.36
LIMS1-202ENST00000338045 PEX10O60683 326 aa17.27■□□□□ 0.36
LIMS1-202ENST00000338045 SLITRK3O94933 977 aa17.27■□□□□ 0.36
LIMS1-202ENST00000338045 MYCLP12524 364 aaPredicted RBP17.27■□□□□ 0.36
LIMS1-202ENST00000338045 PAK1Q13153 545 aa17.27■□□□□ 0.36
LIMS1-202ENST00000338045 ITGB3BPQ13352 177 aaPredicted RBP17.27■□□□□ 0.36
LIMS1-202ENST00000338045 KLHL10Q6JEL2 608 aa17.27■□□□□ 0.36
LIMS1-202ENST00000338045 SYT2Q8N9I0 419 aaPredicted RBP17.27■□□□□ 0.36
LIMS1-202ENST00000338045 DNERQ8NFT8 737 aa17.27■□□□□ 0.36
LIMS1-202ENST00000338045 GPRASP2Q96D09 838 aa17.27■□□□□ 0.36
LIMS1-202ENST00000338045 MS4A4AQ96JQ5 239 aa17.27■□□□□ 0.36
LIMS1-202ENST00000338045 RGL1Q9NZL6 768 aa17.27■□□□□ 0.36
LIMS1-202ENST00000338045 RBPJLQ9UBG7 517 aa17.27■□□□□ 0.36
LIMS1-202ENST00000338045 MAFGO15525 162 aa17.27■□□□□ 0.35
LIMS1-202ENST00000338045 STAM2O75886 525 aa17.27■□□□□ 0.35
LIMS1-202ENST00000338045 SLC25A27O95847 323 aa17.27■□□□□ 0.35
LIMS1-202ENST00000338045 CYP11B2P19099 503 aa17.27■□□□□ 0.35
LIMS1-202ENST00000338045 PPP1R2P41236 205 aa17.27■□□□□ 0.35
LIMS1-202ENST00000338045 PSMC6P62333 389 aa17.27■□□□□ 0.35
LIMS1-202ENST00000338045 CYP4A11Q02928 519 aa17.27■□□□□ 0.35
LIMS1-202ENST00000338045 DYMQ7RTS9 669 aa17.27■□□□□ 0.35
LIMS1-202ENST00000338045 C2orf69Q8N8R5 385 aa17.27■□□□□ 0.35
LIMS1-202ENST00000338045 NEK9Q8TD19 979 aa17.27■□□□□ 0.35
LIMS1-202ENST00000338045 MOV10L1Q9BXT6 1211 aaKnown RBP17.27■□□□□ 0.35
LIMS1-202ENST00000338045 NMRK2Q9NPI5 230 aa17.27■□□□□ 0.35
LIMS1-202ENST00000338045 TBC1D22BQ9NU19 505 aa17.27■□□□□ 0.35
LIMS1-202ENST00000338045 COPB2P35606 906 aa17.26■□□□□ 0.35
LIMS1-202ENST00000338045 FANCCQ00597 558 aa17.26■□□□□ 0.35
LIMS1-202ENST00000338045 STK4Q13043 487 aa17.26■□□□□ 0.35
LIMS1-202ENST00000338045 IWS1Q96ST2 819 aa17.26■□□□□ 0.35
LIMS1-202ENST00000338045 PAGR1Q9BTK6 254 aa17.26■□□□□ 0.35
LIMS1-202ENST00000338045 TXNRD2Q9NNW7 524 aa17.26■□□□□ 0.35
LIMS1-202ENST00000338045 BMP2KQ9NSY1 1161 aaPredicted RBP17.26■□□□□ 0.35
LIMS1-202ENST00000338045 CTNND2Q9UQB3 1225 aa17.26■□□□□ 0.35
LIMS1-202ENST00000338045 SLC45A1Q9Y2W3 748 aa17.26■□□□□ 0.35
LIMS1-202ENST00000338045 CHMP2AO43633 222 aa17.25■□□□□ 0.35
LIMS1-202ENST00000338045 CELF2O95319 508 aaKnown RBP17.25■□□□□ 0.35
LIMS1-202ENST00000338045 EYA4O95677 639 aa17.25■□□□□ 0.35
LIMS1-202ENST00000338045 PTMAP06454 111 aaKnown RBP17.25■□□□□ 0.35
LIMS1-202ENST00000338045 CETPP11597 493 aa17.25■□□□□ 0.35
LIMS1-202ENST00000338045 GTF2A2P52657 109 aa17.25■□□□□ 0.35
LIMS1-202ENST00000338045 STX17P56962 302 aa17.25■□□□□ 0.35
LIMS1-202ENST00000338045 STIM1Q13586 685 aa17.25■□□□□ 0.35
LIMS1-202ENST00000338045 ANKRD35Q8N283 1001 aa17.25■□□□□ 0.35
LIMS1-202ENST00000338045 KIAA0895Q8NCT3 520 aa17.25■□□□□ 0.35
LIMS1-202ENST00000338045 NELFBQ8WX92 580 aa17.25■□□□□ 0.35
LIMS1-202ENST00000338045 DYDC2Q96IM9 177 aa17.25■□□□□ 0.35
LIMS1-202ENST00000338045 IFNKQ9P0W0 207 aa17.25■□□□□ 0.35
LIMS1-202ENST00000338045 ASTN1O14525 1302 aa17.25■□□□□ 0.35
LIMS1-202ENST00000338045 FRMD3A2A2Y4 597 aa17.24■□□□□ 0.35
LIMS1-202ENST00000338045 TESPA1A2RU30 521 aaPredicted RBP17.24■□□□□ 0.35
LIMS1-202ENST00000338045 RGS20O76081 388 aa17.24■□□□□ 0.35
LIMS1-202ENST00000338045 FCER1AP12319 257 aa17.24■□□□□ 0.35
LIMS1-202ENST00000338045 PSMD2Q13200 908 aa17.24■□□□□ 0.35
LIMS1-202ENST00000338045 ARSHQ5FYA8 562 aa17.24■□□□□ 0.35
LIMS1-202ENST00000338045 CDKAL1Q5VV42 579 aa17.24■□□□□ 0.35
LIMS1-202ENST00000338045 NLRX1Q86UT6 975 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms