RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 CNNM4Q6P4Q7 775 aa14□□□□□ -0.17
LIMK1-201ENST00000336180 UNC13DQ70J99 1090 aa14□□□□□ -0.17
LIMK1-201ENST00000336180 TRPM4Q8TD43 1214 aa14□□□□□ -0.17
LIMK1-201ENST00000336180 ABHD10Q9NUJ1 306 aa14□□□□□ -0.17
LIMK1-201ENST00000336180 EIF2AK2P19525 551 aaKnown RBP13.99□□□□□ -0.17
LIMK1-201ENST00000336180 ETF1P62495 437 aaKnown RBP13.99□□□□□ -0.17
LIMK1-201ENST00000336180 NSMFQ6X4W1 530 aa13.99□□□□□ -0.17
LIMK1-201ENST00000336180 BANK1Q8NDB2 785 aa13.99□□□□□ -0.17
LIMK1-201ENST00000336180 DYDC2Q96IM9 177 aa13.99□□□□□ -0.17
LIMK1-201ENST00000336180 RUSC1Q9BVN2 902 aa13.99□□□□□ -0.17
LIMK1-201ENST00000336180 RASSF10A6NK89 507 aa13.99□□□□□ -0.17
LIMK1-201ENST00000336180 SPATA31C1P0DKV0 1188 aa13.99□□□□□ -0.17
LIMK1-201ENST00000336180 MYCLP12524 364 aaPredicted RBP13.99□□□□□ -0.17
LIMK1-201ENST00000336180 CYP11B2P19099 503 aa13.99□□□□□ -0.17
LIMK1-201ENST00000336180 ARID5AQ03989 594 aa13.99□□□□□ -0.17
LIMK1-201ENST00000336180 FAM26FQ5R3K3 315 aa13.99□□□□□ -0.17
LIMK1-201ENST00000336180 CARD6Q9BX69 1037 aa13.99□□□□□ -0.17
LIMK1-201ENST00000336180 NLRC4Q9NPP4 1024 aa13.99□□□□□ -0.17
LIMK1-201ENST00000336180 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.99□□□□□ -0.17
LIMK1-201ENST00000336180 GCOM1H8Y6P7 765 aaPredicted RBP13.98□□□□□ -0.17
LIMK1-201ENST00000336180 CLIC2O15247 247 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 STX10O60499 249 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 POLR2MP0CAP2 368 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 PDIA5Q14554 519 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 ARHGAP27Q6ZUM4 889 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 SFR1Q86XK3 245 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 DNAAF5Q86Y56 855 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 WRAP73Q9P2S5 460 aaPredicted RBP13.98□□□□□ -0.17
LIMK1-201ENST00000336180 LGALS16A8MUM7 142 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 TPM1P09493 284 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 MYBP10242 640 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 SPIRE1Q08AE8 756 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 GRIPAP1Q4V328 841 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 KRT26Q7Z3Y9 468 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 AGBL3Q8NEM8 1001 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 REEP2Q9BRK0 252 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 ADGRG1Q9Y653 693 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 ZNF569Q5MCW4 686 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 LRCH2Q5VUJ6 765 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 DHTKD1Q96HY7 919 aaPredicted RBP13.98□□□□□ -0.17
LIMK1-201ENST00000336180 TEPSINQ96N21 525 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 EIF2AK1Q9BQI3 630 aaKnown RBP13.98□□□□□ -0.17
LIMK1-201ENST00000336180 WDR11Q9BZH6 1224 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 STK17AQ9UEE5 414 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 GUCA1BQ9UMX6 200 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 PAXBP1Q9Y5B6 917 aa13.98□□□□□ -0.17
LIMK1-201ENST00000336180 SREBF1P36956 1147 aa13.97□□□□□ -0.17
LIMK1-201ENST00000336180 CCDC40Q4G0X9 1142 aa13.97□□□□□ -0.17
LIMK1-201ENST00000336180 MIIPQ5JXC2 388 aa13.97□□□□□ -0.17
LIMK1-201ENST00000336180 WRNIP1Q96S55 665 aa13.97□□□□□ -0.17
LIMK1-201ENST00000336180 CUEDC2Q9H467 287 aa13.97□□□□□ -0.17
LIMK1-201ENST00000336180 PHF20L1A8MW92 1017 aa13.97□□□□□ -0.17
LIMK1-201ENST00000336180 EPS15P42566 896 aa13.97□□□□□ -0.17
LIMK1-201ENST00000336180 USP11P51784 963 aa13.97□□□□□ -0.17
LIMK1-201ENST00000336180 ZC2HC1CQ53FD0 456 aaPredicted RBP13.97□□□□□ -0.17
LIMK1-201ENST00000336180 MYOCDQ8IZQ8 938 aa13.97□□□□□ -0.17
LIMK1-201ENST00000336180 PUF60Q9UHX1 559 aaKnown RBP13.97□□□□□ -0.17
LIMK1-201ENST00000336180 LUC7L2Q9Y383 392 aaKnown RBP13.97□□□□□ -0.17
LIMK1-201ENST00000336180 TELO2Q9Y4R8 837 aa13.97□□□□□ -0.17
LIMK1-201ENST00000336180 SAMM50Q9Y512 469 aa13.97□□□□□ -0.17
LIMK1-201ENST00000336180 DUSP10Q9Y6W6 482 aa13.97□□□□□ -0.17
LIMK1-201ENST00000336180 ENC1O14682 589 aa13.96□□□□□ -0.17
LIMK1-201ENST00000336180 ASNSP08243 561 aa13.96□□□□□ -0.17
LIMK1-201ENST00000336180 GCFC2P16383 781 aaKnown RBP13.96□□□□□ -0.17
LIMK1-201ENST00000336180 TERF1P54274 439 aa13.96□□□□□ -0.17
LIMK1-201ENST00000336180 SPAG1Q07617 926 aa13.96□□□□□ -0.17
LIMK1-201ENST00000336180 KIF4BQ2VIQ3 1234 aa13.96□□□□□ -0.17
LIMK1-201ENST00000336180 HINFPQ9BQA5 517 aa13.96□□□□□ -0.17
LIMK1-201ENST00000336180 RIPK3Q9Y572 518 aa13.96□□□□□ -0.17
LIMK1-201ENST00000336180 ZSCAN12O43309 604 aa13.96□□□□□ -0.17
LIMK1-201ENST00000336180 CCDC175P0C221 793 aa13.96□□□□□ -0.17
LIMK1-201ENST00000336180 HMGCS2P54868 508 aa13.96□□□□□ -0.17
LIMK1-201ENST00000336180 KCTD19Q17RG1 926 aaPredicted RBP13.96□□□□□ -0.17
LIMK1-201ENST00000336180 ZNF507Q8TCN5 953 aa13.96□□□□□ -0.17
LIMK1-201ENST00000336180 CHURC1Q8WUH1 139 aa13.96□□□□□ -0.17
LIMK1-201ENST00000336180 ATG4CQ96DT6 458 aa13.96□□□□□ -0.17
LIMK1-201ENST00000336180 PGAP2Q9UHJ9 254 aa13.96□□□□□ -0.17
LIMK1-201ENST00000336180 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.96□□□□□ -0.17
LIMK1-201ENST00000336180 GAS7O60861 476 aa13.96□□□□□ -0.18
LIMK1-201ENST00000336180 NPM3O75607 178 aaKnown RBP13.96□□□□□ -0.18
LIMK1-201ENST00000336180 ECM2O94769 699 aaPredicted RBP13.96□□□□□ -0.18
LIMK1-201ENST00000336180 ZSCAN20P17040 1043 aaPredicted RBP13.96□□□□□ -0.18
LIMK1-201ENST00000336180 NMT1P30419 496 aaKnown RBP13.96□□□□□ -0.18
LIMK1-201ENST00000336180 CASQ1P31415 396 aa13.96□□□□□ -0.18
LIMK1-201ENST00000336180 AP3B2Q13367 1082 aa13.96□□□□□ -0.18
LIMK1-201ENST00000336180 ANKRD13CQ8N6S4 541 aa13.96□□□□□ -0.18
LIMK1-201ENST00000336180 CRYGNQ8WXF5 182 aa13.96□□□□□ -0.18
LIMK1-201ENST00000336180 DRC1Q96MC2 740 aa13.96□□□□□ -0.18
LIMK1-201ENST00000336180 MTFR1LQ9H019 292 aa13.96□□□□□ -0.18
LIMK1-201ENST00000336180 THAP9Q9H5L6 903 aa13.96□□□□□ -0.18
LIMK1-201ENST00000336180 DNM3Q9UQ16 869 aa13.96□□□□□ -0.18
LIMK1-201ENST00000336180 IGLV3-22A0A075B6J6 115 aa13.95□□□□□ -0.18
LIMK1-201ENST00000336180 LRRC10BA6NIK2 292 aa13.95□□□□□ -0.18
LIMK1-201ENST00000336180 SLC12A3P55017 1021 aa13.95□□□□□ -0.18
LIMK1-201ENST00000336180 ARHGAP29Q52LW3 1261 aa13.95□□□□□ -0.18
LIMK1-201ENST00000336180 BTNL9Q6UXG8 535 aa13.95□□□□□ -0.18
LIMK1-201ENST00000336180 CNGA4Q8IV77 575 aa13.95□□□□□ -0.18
LIMK1-201ENST00000336180 PDCL2Q8N4E4 241 aa13.95□□□□□ -0.18
LIMK1-201ENST00000336180 SCFD1Q8WVM8 642 aa13.95□□□□□ -0.18
LIMK1-201ENST00000336180 ZNF577Q9BSK1 485 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms