RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 ESYT2A0FGR8 921 aa17.07■□□□□ 0.32
KATNA1-201ENST00000335643 PPFIA4O75335 1185 aa17.07■□□□□ 0.32
KATNA1-201ENST00000335643 LARGE1O95461 756 aa17.07■□□□□ 0.32
KATNA1-201ENST00000335643 ACRP10323 421 aa17.07■□□□□ 0.32
KATNA1-201ENST00000335643 SP4Q02446 784 aa17.07■□□□□ 0.32
KATNA1-201ENST00000335643 MTMR1Q13613 665 aa17.07■□□□□ 0.32
KATNA1-201ENST00000335643 NEDD9Q14511 834 aa17.07■□□□□ 0.32
KATNA1-201ENST00000335643 MFSD10Q14728 455 aa17.07■□□□□ 0.32
KATNA1-201ENST00000335643 KIAA0753Q2KHM9 967 aa17.07■□□□□ 0.32
KATNA1-201ENST00000335643 NLRX1Q86UT6 975 aa17.07■□□□□ 0.32
KATNA1-201ENST00000335643 TRIM50Q86XT4 487 aa17.07■□□□□ 0.32
KATNA1-201ENST00000335643 CRYGNQ8WXF5 182 aa17.07■□□□□ 0.32
KATNA1-201ENST00000335643 SCLYQ96I15 445 aa17.07■□□□□ 0.32
KATNA1-201ENST00000335643 SENP7Q9BQF6 1050 aa17.07■□□□□ 0.32
KATNA1-201ENST00000335643 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.07■□□□□ 0.32
KATNA1-201ENST00000335643 JADE2Q9NQC1 790 aa17.07■□□□□ 0.32
KATNA1-201ENST00000335643 HDAC6Q9UBN7 1215 aa17.07■□□□□ 0.32
KATNA1-201ENST00000335643 LGALS2P05162 132 aa17.06■□□□□ 0.32
KATNA1-201ENST00000335643 SREBF1P36956 1147 aa17.06■□□□□ 0.32
KATNA1-201ENST00000335643 AP3B2Q13367 1082 aa17.06■□□□□ 0.32
KATNA1-201ENST00000335643 SESTD1Q86VW0 696 aa17.06■□□□□ 0.32
KATNA1-201ENST00000335643 GTF2IRD1Q9UHL9 959 aa17.06■□□□□ 0.32
KATNA1-201ENST00000335643 CHD7Q9P2D1 2997 aa17.06■□□□□ 0.32
KATNA1-201ENST00000335643 FOSP01100 380 aaPredicted RBP17.06■□□□□ 0.32
KATNA1-201ENST00000335643 ARP10275 920 aa17.06■□□□□ 0.32
KATNA1-201ENST00000335643 ZNF200P98182 395 aaPredicted RBP17.06■□□□□ 0.32
KATNA1-201ENST00000335643 AKAP17AQ02040 695 aaKnown RBP17.06■□□□□ 0.32
KATNA1-201ENST00000335643 PTPN11Q06124 597 aaPredicted RBP17.06■□□□□ 0.32
KATNA1-201ENST00000335643 PTGISQ16647 500 aa17.06■□□□□ 0.32
KATNA1-201ENST00000335643 DHX38Q92620 1227 aaKnown RBP17.06■□□□□ 0.32
KATNA1-201ENST00000335643 WNT8BQ93098 351 aa17.06■□□□□ 0.32
KATNA1-201ENST00000335643 MXRA8Q9BRK3 442 aa17.06■□□□□ 0.32
KATNA1-201ENST00000335643 KCNH7Q9NS40 1196 aa17.06■□□□□ 0.32
KATNA1-201ENST00000335643 FAM86B1E9PN63 330 aa17.05■□□□□ 0.32
KATNA1-201ENST00000335643 NOP56O00567 594 aaKnown RBP17.05■□□□□ 0.32
KATNA1-201ENST00000335643 EDIL3O43854 480 aa17.05■□□□□ 0.32
KATNA1-201ENST00000335643 PFKFB2O60825 505 aa17.05■□□□□ 0.32
KATNA1-201ENST00000335643 CTDNEP1O95476 244 aa17.05■□□□□ 0.32
KATNA1-201ENST00000335643 FAM86B2P0C5J1 330 aa17.05■□□□□ 0.32
KATNA1-201ENST00000335643 ARHGAP4P98171 946 aa17.05■□□□□ 0.32
KATNA1-201ENST00000335643 SSRP1Q08945 709 aaKnown RBP17.05■□□□□ 0.32
KATNA1-201ENST00000335643 TMEM240Q5SV17 173 aa17.05■□□□□ 0.32
KATNA1-201ENST00000335643 TMEM199Q8N511 208 aa17.05■□□□□ 0.32
KATNA1-201ENST00000335643 C6orf50Q9HD87 102 aa17.05■□□□□ 0.32
KATNA1-201ENST00000335643 GSTTP1A0A1W2PQM5 241 aa17.04■□□□□ 0.32
KATNA1-201ENST00000335643 CPLX1O14810 134 aa17.04■□□□□ 0.32
KATNA1-201ENST00000335643 SUPT20HL2P0C7V6 817 aa17.04■□□□□ 0.32
KATNA1-201ENST00000335643 ITGB3BPQ13352 177 aaPredicted RBP17.04■□□□□ 0.32
KATNA1-201ENST00000335643 NPY5RQ15761 445 aa17.04■□□□□ 0.32
KATNA1-201ENST00000335643 ME3Q16798 604 aa17.04■□□□□ 0.32
KATNA1-201ENST00000335643 CEP55Q53EZ4 464 aa17.04■□□□□ 0.32
KATNA1-201ENST00000335643 TEX2Q8IWB9 1127 aa17.04■□□□□ 0.32
KATNA1-201ENST00000335643 REXO1Q8N1G1 1221 aaKnown RBP17.04■□□□□ 0.32
KATNA1-201ENST00000335643 C7orf31Q8N865 590 aa17.04■□□□□ 0.32
KATNA1-201ENST00000335643 KATNAL1Q9BW62 490 aa17.04■□□□□ 0.32
KATNA1-201ENST00000335643 GLT8D2Q9H1C3 349 aa17.04■□□□□ 0.32
KATNA1-201ENST00000335643 EHMT1Q9H9B1 1298 aa17.04■□□□□ 0.32
KATNA1-201ENST00000335643 IGLV3-22A0A075B6J6 115 aa17.03■□□□□ 0.32
KATNA1-201ENST00000335643 H3BRB1 525 aa17.03■□□□□ 0.32
KATNA1-201ENST00000335643 MEIS1O00470 390 aa17.03■□□□□ 0.32
KATNA1-201ENST00000335643 NEK4P51957 841 aa17.03■□□□□ 0.32
KATNA1-201ENST00000335643 PPIGQ13427 754 aaKnown RBP eCLIP17.03■□□□□ 0.32
KATNA1-201ENST00000335643 UTP14CQ5TAP6 766 aaKnown RBP17.03■□□□□ 0.32
KATNA1-201ENST00000335643 FAM109BQ6ICB4 259 aaPredicted RBP17.03■□□□□ 0.32
KATNA1-201ENST00000335643 ZNF365Q70YC5 407 aa17.03■□□□□ 0.32
KATNA1-201ENST00000335643 Q7L0L9 218 aa17.03■□□□□ 0.32
KATNA1-201ENST00000335643 TRIM22Q8IYM9 498 aa17.03■□□□□ 0.32
KATNA1-201ENST00000335643 NECAB1Q8N987 351 aa17.03■□□□□ 0.32
KATNA1-201ENST00000335643 CCDC12Q8WUD4 166 aaPredicted RBP17.03■□□□□ 0.32
KATNA1-201ENST00000335643 CDHR1Q96JP9 859 aa17.03■□□□□ 0.32
KATNA1-201ENST00000335643 RNPC3Q96LT9 517 aaKnown RBP17.03■□□□□ 0.32
KATNA1-201ENST00000335643 UIMC1Q96RL1 719 aa17.03■□□□□ 0.32
KATNA1-201ENST00000335643 KIF2CQ99661 725 aa17.03■□□□□ 0.32
KATNA1-201ENST00000335643 SLKQ9H2G2 1235 aaPredicted RBP17.03■□□□□ 0.32
KATNA1-201ENST00000335643 TUT1Q9H6E5 874 aaKnown RBP17.03■□□□□ 0.32
KATNA1-201ENST00000335643 IL23AQ9NPF7 189 aa17.03■□□□□ 0.32
KATNA1-201ENST00000335643 GJB4Q9NTQ9 266 aa17.03■□□□□ 0.32
KATNA1-201ENST00000335643 DEXIO95424 95 aa17.02■□□□□ 0.32
KATNA1-201ENST00000335643 TCF7P36402 384 aaPredicted RBP17.02■□□□□ 0.32
KATNA1-201ENST00000335643 ST3GAL1Q11201 340 aa17.02■□□□□ 0.32
KATNA1-201ENST00000335643 AGO4Q9HCK5 861 aaKnown RBP17.02■□□□□ 0.32
KATNA1-201ENST00000335643 CXXC1Q9P0U4 656 aaPredicted RBP17.02■□□□□ 0.32
KATNA1-201ENST00000335643 NOD1Q9Y239 953 aa17.02■□□□□ 0.32
KATNA1-201ENST00000335643 TET1Q8NFU7 2136 aa17.02■□□□□ 0.32
KATNA1-201ENST00000335643 PRUNE2Q8WUY3 3088 aa17.02■□□□□ 0.31
KATNA1-201ENST00000335643 M0R2N6 131 aa17.02■□□□□ 0.31
KATNA1-201ENST00000335643 CYP3A4P08684 503 aa17.02■□□□□ 0.31
KATNA1-201ENST00000335643 GNA11P29992 359 aa17.02■□□□□ 0.31
KATNA1-201ENST00000335643 HOXC8P31273 242 aa17.02■□□□□ 0.31
KATNA1-201ENST00000335643 GPNMBQ14956 572 aa17.02■□□□□ 0.31
KATNA1-201ENST00000335643 RASIP1Q5U651 963 aa17.02■□□□□ 0.31
KATNA1-201ENST00000335643 CCDC148Q8NFR7 591 aa17.02■□□□□ 0.31
KATNA1-201ENST00000335643 RNPEPQ9H4A4 650 aa17.02■□□□□ 0.31
KATNA1-201ENST00000335643 SH3GLB2Q9NR46 395 aa17.02■□□□□ 0.31
KATNA1-201ENST00000335643 GBF1Q92538 1859 aa17.01■□□□□ 0.31
KATNA1-201ENST00000335643 UNC80Q8N2C7 3258 aa17.01■□□□□ 0.31
KATNA1-201ENST00000335643 PITPNM1O00562 1244 aa17.01■□□□□ 0.31
KATNA1-201ENST00000335643 MAFGO15525 162 aa17.01■□□□□ 0.31
KATNA1-201ENST00000335643 IQCF3P0C7M6 154 aa17.01■□□□□ 0.31
KATNA1-201ENST00000335643 SMIM10L2AP0DMW4 78 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms